RNA–Protein interactions for RNA: ENST00000548092.5

TRAFD1-204, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-204ENST00000548092 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 THEM4Q5T1C6 240 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 ASPHD2Q6ICH7 369 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 GDPD4Q6W3E5 623 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 Q6ZRG5 221 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 MDGA2Q7Z553 956 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 C5orf24Q7Z6I8 188 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 DPPA2Q7Z7J5 298 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 RANBP3LQ86VV4 465 aaPredicted RBP3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 LYPD6Q86Y78 171 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 GPR137CQ8N3F9 429 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 BPIFB2Q8N4F0 458 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 FAM24BQ8N5W8 94 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 ZNF433Q8N7K0 673 aaPredicted RBP3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 PRR26Q8N8Z3 221 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 AMER3Q8N944 861 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 UBAC2Q8NBM4 344 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 HSD17B11Q8NBQ5 300 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 POC1AQ8NBT0 407 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 ZNF740Q8NDX6 193 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 LFNGQ8NES3 379 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 OR10AD1Q8NGE0 317 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 OR2AP1Q8NGE2 309 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 OR10D4PQ8NGN7 298 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 OR13C2Q8NGS9 318 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 OR8U1Q8NH10 309 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 OR4K15Q8NH41 348 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 PFN4Q8NHR9 129 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 FAM57AQ8TBR7 257 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 RNF128Q8TEB7 428 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 SECTM1Q8WVN6 248 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 AQP3Q92482 292 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 DCUN1D4Q92564 292 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 HIST1H2BHQ93079 126 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 ISOC2Q96AB3 205 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 ANKRD9Q96BM1 317 aaPredicted RBP3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 S100PBPQ96BU1 408 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 NTNG2Q96CW9 530 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 CPNE2Q96FN4 548 aaPredicted RBP3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 C16orf58Q96GQ5 468 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 AKR1E2Q96JD6 320 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 ADAD1Q96M93 576 aaKnown RBP3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 ZNF681Q96N22 645 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 OR2M4Q96R27 311 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 HIST1H2BNQ99877 126 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 HIST1H2BMQ99879 126 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 SLC6A7Q99884 636 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 GPR61Q9BZJ8 451 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 ZNF350Q9GZX5 532 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 AICDAQ9GZX7 198 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 OR51V1Q9H2C8 321 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 HRH4Q9H3N8 390 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 SRMSQ9H3Y6 488 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 MTHFD2LQ9H903 347 aaPredicted RBP3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 SIRT7Q9NRC8 400 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 C20orf141Q9NUB4 165 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 GNG8Q9UK08 70 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 MRPS18CQ9Y3D5 142 aaKnown RBP3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 KCNE3Q9Y6H6 103 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 DOCK7Q96N67 2140 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 CPAMD8Q8IZJ3 1885 aa3.56□□□□□ -1.84
TRAFD1-204ENST00000548092 A0A0B4J2E0 115 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 KIR2DL5BA0A0G2JN68 375 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 KIR2DL5BA0A0G2JPC4 375 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 A0A1B0GX12 115 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 TMEM89A2RUT3 159 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 DUXAA6NLW8 204 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 TMEM212A6NML5 194 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 ZNF736B4DX44 427 aaPredicted RBP3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 TRDCB7Z8K6 153 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 UMAD1C9J7I0 102 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 RTCAO00442 366 aaKnown RBP3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 PPP1R2P9O14990 202 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 DLEU1O43261 78 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 ZNF264O43296 627 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 OR2C1O95371 312 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 SFT2D2O95562 160 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 CYB5AP00167 134 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 MBP02144 154 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 DBIP07108 87 aaKnown RBP3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 TACSTD2P09758 323 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 OR5AC1P0C628 307 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 SEC11BP0C7V7 166 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 DANCRP0C864 163 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 PET100P0DJ07 73 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 IGFBP3P17936 291 aaPredicted RBP3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 FUT1P19526 365 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 CXCR1P25024 350 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 IL2RGP31785 369 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 SERPINF1P36955 418 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 PSMB10P40306 273 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 AKR1C3P42330 323 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 KIR3DL2P43630 455 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 NPY4RP50391 375 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 NCBP2P52298 156 aaKnown RBP eCLIP3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 RPL15P61313 204 aaKnown RBP3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 SNRPD1P62314 119 aaKnown RBP3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 RPS4XP62701 263 aaKnown RBP3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 DLK1P80370 383 aa3.55□□□□□ -1.84
TRAFD1-204ENST00000548092 MRPS11P82912 194 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms