RNA–Protein interactions for RNA: ENST00000547530.6

BRF1-211, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF1, Length 3,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-211ENST00000547530 LHX4Q969G2 390 aa13.12□□□□□ -0.31
BRF1-211ENST00000547530 BOD1Q96IK1 185 aa13.12□□□□□ -0.31
BRF1-211ENST00000547530 ELOVL1Q9BW60 279 aa13.12□□□□□ -0.31
BRF1-211ENST00000547530 RPRMQ9NS64 109 aa13.12□□□□□ -0.31
BRF1-211ENST00000547530 TREM2Q9NZC2 230 aa13.12□□□□□ -0.31
BRF1-211ENST00000547530 XKRY2A2RUG3 117 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 KIAA1324LA8MWY0 1029 aaPredicted RBP13.11□□□□□ -0.31
BRF1-211ENST00000547530 SRP19P09132 144 aaKnown RBP13.11□□□□□ -0.31
BRF1-211ENST00000547530 RPL29P47914 159 aaKnown RBP13.11□□□□□ -0.31
BRF1-211ENST00000547530 LPAL2Q16609 132 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 SLC25A47Q6Q0C1 308 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 AAED1Q7RTV5 226 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 Q96M66 194 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 FUT9Q9Y231 359 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 DMRT1Q9Y5R6 373 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 PPIHO43447 177 aaKnown RBP13.11□□□□□ -0.31
BRF1-211ENST00000547530 BCL3P20749 454 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 ZNF574Q6ZN55 896 aaPredicted RBP13.11□□□□□ -0.31
BRF1-211ENST00000547530 ZDHHC23Q8IYP9 409 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 OR4F5Q8NH21 305 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 IFI44Q8TCB0 444 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 FAM131CQ96AQ9 280 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 OR4F4Q96R69 305 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 PLEKHF2Q9H8W4 249 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 PNRC2Q9NPJ4 139 aaKnown RBP13.11□□□□□ -0.31
BRF1-211ENST00000547530 CBLN4Q9NTU7 201 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 CACNG5Q9UF02 275 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 RARRES3Q9UL19 164 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 KRASP01116 189 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 CFIP05156 583 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 TLE4Q04727 773 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 IL15RAQ13261 267 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 C1orf53Q5VUE5 145 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 RTL6Q6ICC9 239 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 MAML2Q8IZL2 1156 aaPredicted RBP13.11□□□□□ -0.31
BRF1-211ENST00000547530 MRGPRX4Q96LA9 322 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 PCGF1Q9BSM1 259 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 PRRG4Q9BZD6 226 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 RNF122Q9H9V4 155 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 SLC39A9Q9NUM3 307 aa13.11□□□□□ -0.31
BRF1-211ENST00000547530 STRAPQ9Y3F4 350 aaKnown RBP13.11□□□□□ -0.31
BRF1-211ENST00000547530 C5orf49A4QMS7 147 aa13.1□□□□□ -0.31
BRF1-211ENST00000547530 CD300LBA8K4G0 201 aa13.1□□□□□ -0.31
BRF1-211ENST00000547530 PSG2P11465 335 aa13.1□□□□□ -0.31
BRF1-211ENST00000547530 GTF3C1Q12789 2109 aa13.1□□□□□ -0.31
BRF1-211ENST00000547530 ICAM4Q14773 271 aa13.1□□□□□ -0.31
BRF1-211ENST00000547530 ARL6IP1Q15041 203 aa13.1□□□□□ -0.31
BRF1-211ENST00000547530 P2RY6Q15077 328 aa13.1□□□□□ -0.31
BRF1-211ENST00000547530 OR8G1Q15617 311 aa13.1□□□□□ -0.31
BRF1-211ENST00000547530 WIPI1Q5MNZ9 446 aaPredicted RBP13.1□□□□□ -0.31
BRF1-211ENST00000547530 PHOSPHO2Q8TCD6 241 aa13.1□□□□□ -0.31
BRF1-211ENST00000547530 ABHD3Q8WU67 409 aa13.1□□□□□ -0.31
BRF1-211ENST00000547530 SLC25A31Q9H0C2 315 aa13.1□□□□□ -0.31
BRF1-211ENST00000547530 PISDQ9UG56 409 aa13.1□□□□□ -0.31
BRF1-211ENST00000547530 ARGFXA6NJG6 315 aa13.1□□□□□ -0.31
BRF1-211ENST00000547530 LMO7DNF2Z398 122 aa13.1□□□□□ -0.31
BRF1-211ENST00000547530 C5orf67F2Z3F1 127 aa13.1□□□□□ -0.31
BRF1-211ENST00000547530 ZNF133P52736 654 aaPredicted RBP13.1□□□□□ -0.31
BRF1-211ENST00000547530 ENDOGQ14249 297 aaKnown RBP13.1□□□□□ -0.31
BRF1-211ENST00000547530 PRR31Q5SQ13 230 aa13.1□□□□□ -0.31
BRF1-211ENST00000547530 CXorf67Q86X51 503 aaPredicted RBP13.1□□□□□ -0.31
BRF1-211ENST00000547530 ADPRHL1Q8NDY3 354 aa13.1□□□□□ -0.31
BRF1-211ENST00000547530 OR56B2PQ8NGI1 322 aa13.1□□□□□ -0.31
BRF1-211ENST00000547530 OR6X1Q8NH79 312 aa13.1□□□□□ -0.31
BRF1-211ENST00000547530 MOB1AQ9H8S9 216 aa13.1□□□□□ -0.31
BRF1-211ENST00000547530 CHD3Q12873 2000 aaKnown RBP13.09□□□□□ -0.31
BRF1-211ENST00000547530 IGHV1OR15-9A0A0B4J2B8 117 aa13.09□□□□□ -0.31
BRF1-211ENST00000547530 A0A0J9YW62 118 aa13.09□□□□□ -0.31
BRF1-211ENST00000547530 A0A1W2PNV4 684 aa13.09□□□□□ -0.31
BRF1-211ENST00000547530 H3F3AP84243 136 aa13.09□□□□□ -0.31
BRF1-211ENST00000547530 FAM53AQ6NSI3 398 aaPredicted RBP13.09□□□□□ -0.31
BRF1-211ENST00000547530 MSI2Q96DH6 328 aaKnown RBP13.09□□□□□ -0.31
BRF1-211ENST00000547530 FOXD3Q9UJU5 478 aaPredicted RBP13.09□□□□□ -0.31
BRF1-211ENST00000547530 C2orf16Q68DN1 1984 aa13.09□□□□□ -0.31
BRF1-211ENST00000547530 PGPEP1LA6NFU8 196 aa13.09□□□□□ -0.31
BRF1-211ENST00000547530 SEC14L6B5MCN3 397 aa13.09□□□□□ -0.31
BRF1-211ENST00000547530 K7N7A8 449 aa13.09□□□□□ -0.31
BRF1-211ENST00000547530 SIRPB1O00241 398 aa13.09□□□□□ -0.31
BRF1-211ENST00000547530 TFF1P04155 84 aa13.09□□□□□ -0.31
BRF1-211ENST00000547530 HOXB1P14653 301 aaPredicted RBP13.09□□□□□ -0.31
BRF1-211ENST00000547530 IL2RGP31785 369 aa13.09□□□□□ -0.31
BRF1-211ENST00000547530 LSM6P62312 80 aaKnown RBP13.09□□□□□ -0.31
BRF1-211ENST00000547530 RAB1AP62820 205 aa13.09□□□□□ -0.31
BRF1-211ENST00000547530 RSPO1Q2MKA7 263 aaPredicted RBP13.09□□□□□ -0.31
BRF1-211ENST00000547530 SLC25A45Q8N413 288 aa13.09□□□□□ -0.31
BRF1-211ENST00000547530 D2HGDHQ8N465 521 aa13.09□□□□□ -0.31
BRF1-211ENST00000547530 PP6455Q8WZ26 134 aa13.09□□□□□ -0.31
BRF1-211ENST00000547530 IL22RA2Q969J5 263 aa13.09□□□□□ -0.31
BRF1-211ENST00000547530 EML6Q6ZMW3 1958 aa13.09□□□□□ -0.31
BRF1-211ENST00000547530 DVL1O14640 695 aa13.09□□□□□ -0.31
BRF1-211ENST00000547530 CNN3Q15417 329 aaKnown RBP13.09□□□□□ -0.31
BRF1-211ENST00000547530 FAM185AQ8N0U4 392 aa13.09□□□□□ -0.31
BRF1-211ENST00000547530 ZNF501Q96CX3 271 aaPredicted RBP13.09□□□□□ -0.31
BRF1-211ENST00000547530 SPACA9Q96E40 222 aaPredicted RBP13.09□□□□□ -0.31
BRF1-211ENST00000547530 OR5B12Q96R08 314 aa13.09□□□□□ -0.31
BRF1-211ENST00000547530 GINS3Q9BRX5 216 aa13.09□□□□□ -0.31
BRF1-211ENST00000547530 OCIAD1Q9NX40 245 aa13.09□□□□□ -0.31
BRF1-211ENST00000547530 MTCH2Q9Y6C9 303 aa13.09□□□□□ -0.31
BRF1-211ENST00000547530 FOLR2P14207 255 aa13.08□□□□□ -0.32
BRF1-211ENST00000547530 ZNF816Q0VGE8 651 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms