RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 SCTP09683 121 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 JMJD7P0C870 316 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 F2RP25116 425 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 APLNRP35414 380 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 CD200P41217 278 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 PRSS12P56730 875 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 ACSF3Q4G176 576 aaPredicted RBP12.5□□□□□ -0.41
LETMD1-209ENST00000547318 STX12Q86Y82 276 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 C1orf210Q8IVY1 113 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 SUMF2Q8NBJ7 301 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 LSM10Q969L4 123 aaKnown RBP12.5□□□□□ -0.41
LETMD1-209ENST00000547318 SIGLEC12Q96PQ1 595 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 CLCC1Q96S66 551 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 C12orf57Q99622 126 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 PRRG4Q9BZD6 226 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 SH3BGRL3Q9H299 93 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 KLF13Q9Y2Y9 288 aaPredicted RBP12.5□□□□□ -0.41
LETMD1-209ENST00000547318 ZNF205O95201 554 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 SMIM6P0DI80 62 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 MEOX2P50222 304 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 POLR2GP62487 172 aaKnown RBP eCLIP12.5□□□□□ -0.41
LETMD1-209ENST00000547318 RPL23AP62750 156 aaKnown RBP12.5□□□□□ -0.41
LETMD1-209ENST00000547318 HABP2Q14520 560 aaPredicted RBP12.5□□□□□ -0.41
LETMD1-209ENST00000547318 HERPUD1Q15011 391 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 HIKESHIQ53FT3 197 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 SOHLH1Q5JUK2 328 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 TMEM164Q5U3C3 297 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 MCEMP1Q8IX19 187 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 TUSC5Q8IXB3 177 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 OR10G4Q8NGN3 311 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 OR10J5Q8NHC4 309 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 LILRB1Q8NHL6 650 aaPredicted RBP12.5□□□□□ -0.41
LETMD1-209ENST00000547318 MRPL30Q8TCC3 161 aaKnown RBP12.5□□□□□ -0.41
LETMD1-209ENST00000547318 ATP5SQ99766 215 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 TTTY12Q9BZ98 90 aa12.5□□□□□ -0.41
LETMD1-209ENST00000547318 TRAV1-1A0A0B4J248 108 aa12.49□□□□□ -0.41
LETMD1-209ENST00000547318 RBFOX3A6NFN3 312 aa12.49□□□□□ -0.41
LETMD1-209ENST00000547318 UBE2CO00762 179 aa12.49□□□□□ -0.41
LETMD1-209ENST00000547318 SSSCA1O60232 199 aa12.49□□□□□ -0.41
LETMD1-209ENST00000547318 PGLYRP1O75594 196 aaPredicted RBP12.49□□□□□ -0.41
LETMD1-209ENST00000547318 HLA-HP01893 362 aa12.49□□□□□ -0.41
LETMD1-209ENST00000547318 HSPB1P04792 205 aaKnown RBP12.49□□□□□ -0.41
LETMD1-209ENST00000547318 S100A6P06703 90 aa12.49□□□□□ -0.41
LETMD1-209ENST00000547318 RPL35P42766 123 aaKnown RBP12.49□□□□□ -0.41
LETMD1-209ENST00000547318 SPINK14Q6IE38 97 aa12.49□□□□□ -0.41
LETMD1-209ENST00000547318 C1QL4Q86Z23 238 aa12.49□□□□□ -0.41
LETMD1-209ENST00000547318 H1FOOQ8IZA3 346 aaPredicted RBP12.49□□□□□ -0.41
LETMD1-209ENST00000547318 FGF23Q9GZV9 251 aaPredicted RBP12.49□□□□□ -0.41
LETMD1-209ENST00000547318 ESRP2Q9H6T0 727 aaKnown RBP12.49□□□□□ -0.41
LETMD1-209ENST00000547318 CALHM2Q9HA72 323 aa12.49□□□□□ -0.41
LETMD1-209ENST00000547318 A0A087WWC5 75 aa12.49□□□□□ -0.41
LETMD1-209ENST00000547318 J3QT63 122 aa12.49□□□□□ -0.41
LETMD1-209ENST00000547318 SNRNP70P08621 437 aaKnown RBP12.49□□□□□ -0.41
LETMD1-209ENST00000547318 CCNOP22674 350 aa12.49□□□□□ -0.41
LETMD1-209ENST00000547318 PDCD1Q15116 288 aa12.49□□□□□ -0.41
LETMD1-209ENST00000547318 OR1C1Q15619 314 aa12.49□□□□□ -0.41
LETMD1-209ENST00000547318 AKR1C8PQ5T2L2 129 aa12.49□□□□□ -0.41
LETMD1-209ENST00000547318 ZNF324BQ6AW86 544 aaPredicted RBP12.49□□□□□ -0.41
LETMD1-209ENST00000547318 SP5Q6BEB4 398 aaPredicted RBP12.49□□□□□ -0.41
LETMD1-209ENST00000547318 PCSK4Q6UW60 755 aa12.49□□□□□ -0.41
LETMD1-209ENST00000547318 CLEC9AQ6UXN8 241 aa12.49□□□□□ -0.41
LETMD1-209ENST00000547318 FAM58AQ8N1B3 248 aa12.49□□□□□ -0.41
LETMD1-209ENST00000547318 OR5C1Q8NGR4 320 aa12.49□□□□□ -0.41
LETMD1-209ENST00000547318 CDX2Q99626 313 aaPredicted RBP12.49□□□□□ -0.41
LETMD1-209ENST00000547318 METTL1Q9UBP6 276 aaKnown RBP12.49□□□□□ -0.41
LETMD1-209ENST00000547318 WSB1Q9Y6I7 421 aa12.49□□□□□ -0.41
LETMD1-209ENST00000547318 SPTBN5Q9NRC6 3674 aaKnown RBP12.48□□□□□ -0.41
LETMD1-209ENST00000547318 C5orf52A6NGY3 159 aa12.48□□□□□ -0.41
LETMD1-209ENST00000547318 PROB1E7EW31 1015 aa12.48□□□□□ -0.41
LETMD1-209ENST00000547318 IGHV3-9P01782 118 aa12.48□□□□□ -0.41
LETMD1-209ENST00000547318 OR8U8P0C7N1 319 aa12.48□□□□□ -0.41
LETMD1-209ENST00000547318 GLI4P10075 376 aa12.48□□□□□ -0.41
LETMD1-209ENST00000547318 RAB5AP20339 215 aa12.48□□□□□ -0.41
LETMD1-209ENST00000547318 SULT1A1P50225 295 aa12.48□□□□□ -0.41
LETMD1-209ENST00000547318 TAS2R30P59541 319 aa12.48□□□□□ -0.41
LETMD1-209ENST00000547318 PLPPR1Q8TBJ4 325 aa12.48□□□□□ -0.41
LETMD1-209ENST00000547318 PARD6GQ9BYG4 376 aaPredicted RBP12.48□□□□□ -0.41
LETMD1-209ENST00000547318 PRDM6Q9NQX0 595 aa12.48□□□□□ -0.41
LETMD1-209ENST00000547318 CCL28Q9NRJ3 127 aa12.48□□□□□ -0.41
LETMD1-209ENST00000547318 LHX6Q9UPM6 363 aa12.48□□□□□ -0.41
LETMD1-209ENST00000547318 POLDIP2Q9Y2S7 368 aa12.48□□□□□ -0.41
LETMD1-209ENST00000547318 RNF115Q9Y4L5 304 aa12.48□□□□□ -0.41
LETMD1-209ENST00000547318 A0A096LPE4 126 aa12.47□□□□□ -0.41
LETMD1-209ENST00000547318 IGKV1D-13A0A0B4J2D9 117 aa12.47□□□□□ -0.41
LETMD1-209ENST00000547318 A0A1W2PPZ6 126 aa12.47□□□□□ -0.41
LETMD1-209ENST00000547318 KLRC4-KLRK1H3BQV0 150 aa12.47□□□□□ -0.41
LETMD1-209ENST00000547318 IFNA5P01569 189 aa12.47□□□□□ -0.41
LETMD1-209ENST00000547318 SERPINE2P07093 398 aa12.47□□□□□ -0.41
LETMD1-209ENST00000547318 IGKV1-13P0DP09 117 aa12.47□□□□□ -0.41
LETMD1-209ENST00000547318 ZXDAP98168 799 aa12.47□□□□□ -0.41
LETMD1-209ENST00000547318 CLN3Q13286 438 aa12.47□□□□□ -0.41
LETMD1-209ENST00000547318 EIF2S3LQ2VIR3 472 aaKnown RBP12.47□□□□□ -0.41
LETMD1-209ENST00000547318 ZNF506Q5JVG8 444 aa12.47□□□□□ -0.41
LETMD1-209ENST00000547318 NUFIP2Q7Z417 695 aaKnown RBP12.47□□□□□ -0.41
LETMD1-209ENST00000547318 RTL8AQ9BWD3 113 aa12.47□□□□□ -0.41
LETMD1-209ENST00000547318 PARP12Q9H0J9 701 aaKnown RBP12.47□□□□□ -0.41
LETMD1-209ENST00000547318 FBXO7Q9Y3I1 522 aa12.47□□□□□ -0.41
LETMD1-209ENST00000547318 A0A0C4DFX4 3053 aa12.47□□□□□ -0.41
LETMD1-209ENST00000547318 IGKV1-6A0A0C4DH72 117 aa12.47□□□□□ -0.41
LETMD1-209ENST00000547318 CXorf65A6NEN9 183 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms