RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 ZNF705DP0CH99 300 aaPredicted RBP9.25□□□□□ -0.93
NPAS3-205ENST00000547068 ZNF705BP0CI00 300 aaPredicted RBP9.25□□□□□ -0.93
NPAS3-205ENST00000547068 IRF2P14316 349 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 FAHP16930 419 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 MSX1P28360 303 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 CLRN1P58418 232 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 HERV-K104P61576 105 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 SRPXP78539 464 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 MRPS34P82930 218 aaKnown RBP9.25□□□□□ -0.93
NPAS3-205ENST00000547068 EIF3IQ13347 325 aaKnown RBP9.25□□□□□ -0.93
NPAS3-205ENST00000547068 ACTL10Q5JWF8 245 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 THEM4Q5T1C6 240 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 MOB3AQ96BX8 217 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 PGAM5Q96HS1 289 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 DIRC2Q96SL1 478 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 TMEM222Q9H0R3 208 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 LPAR2Q9HBW0 351 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 RPRMQ9NS64 109 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 UBE2J1Q9Y385 318 aaPredicted RBP9.25□□□□□ -0.93
NPAS3-205ENST00000547068 SHANK1Q9Y566 2161 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 C5orf63A6NC05 138 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 MPPED1O15442 326 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 ADAM20O43506 726 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 TMEM50AO95807 157 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 IFNA5P01569 189 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 CTSEP14091 401 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 UCP3P55916 312 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 MTCP1P56278 107 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 TMEM241Q24JQ0 296 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 BSXQ3C1V8 233 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 LYSMD4Q5XG99 296 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 OR13H1Q8NG92 308 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 OR2V1Q8NHB1 315 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 SLC37A2Q8TED4 501 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 ZNF721Q8TF20 911 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 TMEM234Q8WY98 164 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 DYRK2Q92630 601 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 LYZL4Q96KX0 146 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 RIMS4Q9H426 269 aaPredicted RBP9.25□□□□□ -0.93
NPAS3-205ENST00000547068 Q9N2K0 584 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 ASCL3Q9NQ33 180 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 ZNF581Q9P0T4 197 aa9.25□□□□□ -0.93
NPAS3-205ENST00000547068 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.24□□□□□ -0.93
NPAS3-205ENST00000547068 TNFRSF10CO14798 259 aa9.24□□□□□ -0.93
NPAS3-205ENST00000547068 TNFSF12O43508 249 aa9.24□□□□□ -0.93
NPAS3-205ENST00000547068 IGKV3-11P04433 115 aa9.24□□□□□ -0.93
NPAS3-205ENST00000547068 CNN1P51911 297 aaKnown RBP9.24□□□□□ -0.93
NPAS3-205ENST00000547068 IL24Q13007 206 aa9.24□□□□□ -0.93
NPAS3-205ENST00000547068 MFAP5Q13361 173 aa9.24□□□□□ -0.93
NPAS3-205ENST00000547068 PRSS8Q16651 343 aa9.24□□□□□ -0.93
NPAS3-205ENST00000547068 PMS2CLQ68D20 193 aa9.24□□□□□ -0.93
NPAS3-205ENST00000547068 UEVLDQ8IX04 471 aa9.24□□□□□ -0.93
NPAS3-205ENST00000547068 ABHD14BQ96IU4 210 aa9.24□□□□□ -0.93
NPAS3-205ENST00000547068 ELOVL1Q9BW60 279 aa9.24□□□□□ -0.93
NPAS3-205ENST00000547068 PNRC2Q9NPJ4 139 aaKnown RBP9.24□□□□□ -0.93
NPAS3-205ENST00000547068 GALR2O43603 387 aaPredicted RBP9.24□□□□□ -0.93
NPAS3-205ENST00000547068 CHST1O43916 411 aa9.24□□□□□ -0.93
NPAS3-205ENST00000547068 HRASP01112 189 aa9.24□□□□□ -0.93
NPAS3-205ENST00000547068 AADACP22760 399 aa9.24□□□□□ -0.93
NPAS3-205ENST00000547068 BRS3P32247 399 aa9.24□□□□□ -0.93
NPAS3-205ENST00000547068 WNT5AP41221 380 aa9.24□□□□□ -0.93
NPAS3-205ENST00000547068 BRICD5Q6PL45 260 aa9.24□□□□□ -0.93
NPAS3-205ENST00000547068 CYP2G1PQ6ZSU1 146 aa9.24□□□□□ -0.93
NPAS3-205ENST00000547068 MRGPRGQ86SM5 289 aa9.24□□□□□ -0.93
NPAS3-205ENST00000547068 C20orf196Q8IYI0 205 aa9.24□□□□□ -0.93
NPAS3-205ENST00000547068 PP6455Q8WZ26 134 aa9.24□□□□□ -0.93
NPAS3-205ENST00000547068 ZNF385AQ96PM9 386 aaKnown RBP9.24□□□□□ -0.93
NPAS3-205ENST00000547068 TBX15Q96SF7 602 aa9.24□□□□□ -0.93
NPAS3-205ENST00000547068 RSG1Q9BU20 258 aa9.24□□□□□ -0.93
NPAS3-205ENST00000547068 MRPL13Q9BYD1 178 aaKnown RBP9.24□□□□□ -0.93
NPAS3-205ENST00000547068 VSIRQ9H7M9 311 aa9.24□□□□□ -0.93
NPAS3-205ENST00000547068 SERINC1Q9NRX5 453 aa9.24□□□□□ -0.93
NPAS3-205ENST00000547068 KLHL13Q9P2N7 655 aa9.24□□□□□ -0.93
NPAS3-205ENST00000547068 TMEM150CB9EJG8 249 aa9.23□□□□□ -0.93
NPAS3-205ENST00000547068 H3BML4 177 aa9.23□□□□□ -0.93
NPAS3-205ENST00000547068 DDAH2O95865 285 aa9.23□□□□□ -0.93
NPAS3-205ENST00000547068 TNFP01375 233 aa9.23□□□□□ -0.93
NPAS3-205ENST00000547068 IFNA1P01562 189 aa9.23□□□□□ -0.93
NPAS3-205ENST00000547068 BLKP51451 505 aa9.23□□□□□ -0.93
NPAS3-205ENST00000547068 ZNF41P51814 821 aaPredicted RBP9.23□□□□□ -0.93
NPAS3-205ENST00000547068 GRB2P62993 217 aaKnown RBP9.23□□□□□ -0.93
NPAS3-205ENST00000547068 HIST1H3AP68431 136 aa9.23□□□□□ -0.93
NPAS3-205ENST00000547068 ID3Q02535 119 aa9.23□□□□□ -0.93
NPAS3-205ENST00000547068 BATFQ16520 125 aa9.23□□□□□ -0.93
NPAS3-205ENST00000547068 CARD17Q5XLA6 110 aa9.23□□□□□ -0.93
NPAS3-205ENST00000547068 FAM180AQ6UWF9 173 aa9.23□□□□□ -0.93
NPAS3-205ENST00000547068 LRP11Q86VZ4 500 aa9.23□□□□□ -0.93
NPAS3-205ENST00000547068 MBD3L1Q8WWY6 194 aa9.23□□□□□ -0.93
NPAS3-205ENST00000547068 MS4A10Q96PG2 267 aa9.23□□□□□ -0.93
NPAS3-205ENST00000547068 RBKSQ9H477 322 aa9.23□□□□□ -0.93
NPAS3-205ENST00000547068 ZNF286AQ9HBT8 521 aa9.23□□□□□ -0.93
NPAS3-205ENST00000547068 PIGLQ9Y2B2 252 aa9.23□□□□□ -0.93
NPAS3-205ENST00000547068 RTTNQ86VV8 2226 aa9.23□□□□□ -0.93
NPAS3-205ENST00000547068 WDFY4Q6ZS81 3184 aa9.23□□□□□ -0.93
NPAS3-205ENST00000547068 CHD3Q12873 2000 aaKnown RBP9.23□□□□□ -0.93
NPAS3-205ENST00000547068 SPTY2D1-AS1A0A0U1RR47 76 aa9.23□□□□□ -0.93
NPAS3-205ENST00000547068 C2orf72A6NCS6 295 aa9.23□□□□□ -0.93
NPAS3-205ENST00000547068 ANGPTL7O43827 346 aa9.23□□□□□ -0.93
NPAS3-205ENST00000547068 DHRS3O75911 302 aa9.23□□□□□ -0.93
NPAS3-205ENST00000547068 SELEP16581 610 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms