RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 A0A1B0GTI1 187 aa1.04□□□□□ -2.24
CCDC38-204ENST00000546816 NDUFS8O00217 210 aa1.04□□□□□ -2.24
CCDC38-204ENST00000546816 PLPP3O14495 311 aa1.04□□□□□ -2.24
CCDC38-204ENST00000546816 GIMD1P0DJR0 217 aa1.04□□□□□ -2.24
CCDC38-204ENST00000546816 PSKH1P11801 424 aa1.04□□□□□ -2.24
CCDC38-204ENST00000546816 CCL2P13500 99 aa1.04□□□□□ -2.24
CCDC38-204ENST00000546816 ZNF22P17026 224 aaPredicted RBP1.04□□□□□ -2.24
CCDC38-204ENST00000546816 C1QTNF8P60827 252 aa1.04□□□□□ -2.24
CCDC38-204ENST00000546816 TSPAN5P62079 268 aa1.04□□□□□ -2.24
CCDC38-204ENST00000546816 VSNL1P62760 191 aa1.04□□□□□ -2.24
CCDC38-204ENST00000546816 HBG1P69891 147 aa1.04□□□□□ -2.24
CCDC38-204ENST00000546816 HBG2P69892 147 aa1.04□□□□□ -2.24
CCDC38-204ENST00000546816 CEACAM21Q3KPI0 293 aa1.04□□□□□ -2.24
CCDC38-204ENST00000546816 NXNL2Q5VZ03 156 aa1.04□□□□□ -2.24
CCDC38-204ENST00000546816 ELP2Q6IA86 826 aa1.04□□□□□ -2.24
CCDC38-204ENST00000546816 LAMTOR1Q6IAA8 161 aa1.04□□□□□ -2.24
CCDC38-204ENST00000546816 CLEC20AQ6ZU45 233 aa1.04□□□□□ -2.24
CCDC38-204ENST00000546816 CDRT4Q8N9R6 151 aa1.04□□□□□ -2.24
CCDC38-204ENST00000546816 CASTOR1Q8WTX7 329 aa1.04□□□□□ -2.24
CCDC38-204ENST00000546816 OR5P2Q8WZ92 322 aa1.04□□□□□ -2.24
CCDC38-204ENST00000546816 REEP6Q96HR9 211 aa1.04□□□□□ -2.24
CCDC38-204ENST00000546816 TSSK6Q9BXA6 273 aa1.04□□□□□ -2.24
CCDC38-204ENST00000546816 METTL8Q9H825 291 aaKnown RBP1.04□□□□□ -2.24
CCDC38-204ENST00000546816 ZNF286AQ9HBT8 521 aa1.04□□□□□ -2.24
CCDC38-204ENST00000546816 NXT1Q9UKK6 140 aaKnown RBP1.04□□□□□ -2.24
CCDC38-204ENST00000546816 LINC00588Q9Y4M8 146 aa1.04□□□□□ -2.24
CCDC38-204ENST00000546816 USH1CQ9Y6N9 552 aa1.04□□□□□ -2.24
CCDC38-204ENST00000546816 ARAP3Q8WWN8 1544 aa1.04□□□□□ -2.24
CCDC38-204ENST00000546816 OTOFQ9HC10 1997 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 FAM183AA6NL82 134 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 PSMD11O00231 422 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 LECT2O14960 151 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 UBDO15205 165 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 SPOPO43791 374 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 SH2D1AO60880 128 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 CRTAPO75718 401 aaPredicted RBP1.03□□□□□ -2.24
CCDC38-204ENST00000546816 EVI2BP34910 448 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 RPA3P35244 121 aaPredicted RBP1.03□□□□□ -2.24
CCDC38-204ENST00000546816 COILP38432 576 aaPredicted RBP1.03□□□□□ -2.24
CCDC38-204ENST00000546816 CD164Q04900 197 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 PRDX1Q06830 199 aaKnown RBP1.03□□□□□ -2.24
CCDC38-204ENST00000546816 TRAM1Q15629 374 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 TRIP13Q15645 432 aaPredicted RBP1.03□□□□□ -2.24
CCDC38-204ENST00000546816 PSG3Q16557 428 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 C10orf91Q5T1B1 145 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 FAM162BQ5T6X4 162 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 FAM183BPQ6ZVS7 135 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 SSX6Q7RTT6 188 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 NIT1Q86X76 327 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 KRTCAP2Q8N6L1 136 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 FER1L6-AS1Q8NA97 138 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 GATD1Q8NB37 220 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 OR2V1Q8NHB1 315 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 LRRC20Q8TCA0 184 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 KCTD4Q8WVF5 259 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 ZNF75CPQ92670 426 aaPredicted RBP1.03□□□□□ -2.24
CCDC38-204ENST00000546816 CLDN23Q96B33 292 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 MSANTD3Q96H12 275 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 APOL4Q9BPW4 351 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 PRRG3Q9BZD7 231 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 TMBIM4Q9HC24 238 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 MAT2BQ9NZL9 334 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 PSORS1C2Q9UIG4 136 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 RPUSD1Q9UJJ7 312 aaKnown RBP1.03□□□□□ -2.24
CCDC38-204ENST00000546816 POMPQ9Y244 141 aa1.03□□□□□ -2.24
CCDC38-204ENST00000546816 TBL2Q9Y4P3 447 aaKnown RBP1.03□□□□□ -2.24
CCDC38-204ENST00000546816 IGHV3OR15-7A0A075B7D8 119 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 A0A1B0GW15 77 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 RAB19A4D1S5 217 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 RNASEK-C17orf49H0YIS7 233 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 I3L4J1 428 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 TP53I11O14683 189 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 EPPINO95925 133 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 CST4P01036 141 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 GUSBP08236 651 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 CCDC172P0C7W6 258 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 MAGEA3P43357 314 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 AQP5P55064 265 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 RHOAP61586 193 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 TMEM176BQ3YBM2 270 aaPredicted RBP1.02□□□□□ -2.25
CCDC38-204ENST00000546816 DGAT2L6Q6ZPD8 337 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 SCXQ7RTU7 201 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 FAM19A3Q7Z5A8 133 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 C10orf107Q8IVU9 208 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 OR4A5Q8NH83 315 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 TMEM239Q8WW34 195 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 GBF1Q92538 1859 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 TXNDC17Q9BRA2 123 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 EBPLQ9BY08 206 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 ARL6Q9H0F7 186 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 ALX4Q9H161 411 aaPredicted RBP1.02□□□□□ -2.25
CCDC38-204ENST00000546816 CXCL16Q9H2A7 254 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 GOLPH3Q9H4A6 298 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 SLC23A2Q9UGH3 650 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 ADAMTS7Q9UKP4 1686 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 BTRCQ9Y297 605 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 PHLDA3Q9Y5J5 127 aa1.02□□□□□ -2.25
CCDC38-204ENST00000546816 DOCK10Q96BY6 2186 aa1.01□□□□□ -2.25
CCDC38-204ENST00000546816 CR1P17927 2039 aa1.01□□□□□ -2.25
CCDC38-204ENST00000546816 CEP170Q5SW79 1584 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms