RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 PAGE4O60829 102 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 NDUFB7P17568 137 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 DSCR4P56555 118 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-212ENST00000546744 DEFB119Q8N690 84 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 AQP3Q92482 292 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 FBXO17Q96EF6 278 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 IL19Q9UHD0 177 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 A0A1B0GTH9 108 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 FAM90A10PA6NDY2 464 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 FAM90A18PA6NE21 464 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 FAM90A16PA6NEW6 464 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 FAM90A20PA6NIJ5 464 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 FAM90A8PA6NJQ4 464 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 FAM90A7PA6NKC0 464 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 FAM90A22PA8MWA6 464 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 FAM90A12PA8MX19 464 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 FAM90A5PA8MXJ8 464 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 FAM90A23PA8MXZ1 464 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 IL2RAP01589 272 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 FAM90A15PP0C7V4 464 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 FAM90A13PP0C7W8 464 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 FAM90A14PP0C7W9 464 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 FAM90A24PP0C7X0 464 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 RCC1P18754 421 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-212ENST00000546744 SLC25A34Q6PIV7 304 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 LYZL2Q7Z4W2 148 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 OR10AD1Q8NGE0 317 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 CHST5Q9GZS9 411 aa11.27□□□□□ -0.61
PTCH1-212ENST00000546744 PCM1Q15154 2024 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 OR2T8A6NH00 312 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 TMEM210A6NLX4 147 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 RRADP55042 308 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 ERVFRD-1P60508 538 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 ZP1P60852 638 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 ZSWIM8A7E2V4 1837 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 TMEM238LA0A1B0GVL6 79 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 A6NJY4 79 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 MOSPD3O75425 235 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 CD27P26842 260 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 DMWDQ09019 674 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 MYBPHQ13203 477 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 OR8B12Q8NGG6 310 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 ASB10Q8WXI3 467 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 IP6K3Q96PC2 410 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 CRISPLD2Q9H0B8 497 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 PEF1Q9UBV8 284 aaKnown RBP11.26□□□□□ -0.61
PTCH1-212ENST00000546744 TRBV23-1A0A0A0MS06 115 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 A6NCN8 305 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 IER3P46695 156 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 P2RY4P51582 365 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 EFNB2P52799 333 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 RND3P61587 244 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 VMA21Q3ZAQ7 101 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 C9orf135Q5VTT2 229 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 ZNF775Q96BV0 537 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-212ENST00000546744 FER1L6-AS2Q96M78 137 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 MOGAT1Q96PD6 335 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 LPAR5Q9H1C0 372 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 DYNLRB1Q9NP97 96 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 TMEM38BQ9NVV0 291 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 MGAMO43451 1857 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 C5orf49A4QMS7 147 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 NKX2-6A6NCS4 301 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 ENSAO43768 121 aaKnown RBP11.26□□□□□ -0.61
PTCH1-212ENST00000546744 KBTBD11O94819 623 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 ZNF816Q0VGE8 651 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-212ENST00000546744 ZNF718Q3SXZ3 478 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 GLRX5Q86SX6 157 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 C1QL4Q86Z23 238 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 OR13H1Q8NG92 308 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 SPACA9Q96E40 222 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-212ENST00000546744 COX14Q96I36 57 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 PIPOXQ9P0Z9 390 aa11.26□□□□□ -0.61
PTCH1-212ENST00000546744 GCM2O75603 506 aaPredicted RBP11.25□□□□□ -0.61
PTCH1-212ENST00000546744 NGFP01138 241 aa11.25□□□□□ -0.61
PTCH1-212ENST00000546744 SLC25A5P05141 298 aaKnown RBP11.25□□□□□ -0.61
PTCH1-212ENST00000546744 HERPUD1Q15011 391 aa11.25□□□□□ -0.61
PTCH1-212ENST00000546744 Q1RN00 199 aa11.25□□□□□ -0.61
PTCH1-212ENST00000546744 CNEP1R1Q8N9A8 125 aa11.25□□□□□ -0.61
PTCH1-212ENST00000546744 OR4F17Q8NGA8 305 aa11.25□□□□□ -0.61
PTCH1-212ENST00000546744 VSTM2AQ8TAG5 236 aa11.25□□□□□ -0.61
PTCH1-212ENST00000546744 RGP1Q92546 391 aaPredicted RBP11.25□□□□□ -0.61
PTCH1-212ENST00000546744 VSTM2LQ96N03 204 aa11.25□□□□□ -0.61
PTCH1-212ENST00000546744 GPR27Q9NS67 375 aa11.25□□□□□ -0.61
PTCH1-212ENST00000546744 FOXJ2Q9P0K8 574 aa11.25□□□□□ -0.61
PTCH1-212ENST00000546744 MTCH2Q9Y6C9 303 aa11.25□□□□□ -0.61
PTCH1-212ENST00000546744 TMIGD3P0DMS9 266 aaPredicted RBP11.25□□□□□ -0.61
PTCH1-212ENST00000546744 UCP3P55916 312 aa11.25□□□□□ -0.61
PTCH1-212ENST00000546744 OR1C1Q15619 314 aa11.25□□□□□ -0.61
PTCH1-212ENST00000546744 OR4S2Q8NH73 311 aa11.25□□□□□ -0.61
PTCH1-212ENST00000546744 WBP2Q969T9 261 aa11.25□□□□□ -0.61
PTCH1-212ENST00000546744 SLC25A33Q9BSK2 321 aa11.25□□□□□ -0.61
PTCH1-212ENST00000546744 OR2W1Q9Y3N9 320 aa11.25□□□□□ -0.61
PTCH1-212ENST00000546744 CRYM-AS1A6NIL9 109 aa11.25□□□□□ -0.61
PTCH1-212ENST00000546744 H0Y980 276 aa11.25□□□□□ -0.61
PTCH1-212ENST00000546744 SP1P08047 785 aa11.25□□□□□ -0.61
PTCH1-212ENST00000546744 TMEM50BP56557 158 aa11.25□□□□□ -0.61
PTCH1-212ENST00000546744 NANOS3P60323 173 aaKnown RBP11.25□□□□□ -0.61
PTCH1-212ENST00000546744 HERVK_113P61574 105 aa11.25□□□□□ -0.61
PTCH1-212ENST00000546744 YBX1P67809 324 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms