RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 OR1J1Q8NGS3 322 aa13.53□□□□□ -0.24
LDLR-204ENST00000545707 SIGLEC12Q96PQ1 595 aa13.53□□□□□ -0.24
LDLR-204ENST00000545707 LYRM2Q9NU23 88 aaPredicted RBP13.53□□□□□ -0.24
LDLR-204ENST00000545707 FAM86C1Q9NVL1 165 aa13.53□□□□□ -0.24
LDLR-204ENST00000545707 LIPGQ9Y5X9 500 aa13.53□□□□□ -0.24
LDLR-204ENST00000545707 A0A0G2JRQ6 117 aa13.52□□□□□ -0.24
LDLR-204ENST00000545707 RBFOX3A6NFN3 312 aa13.52□□□□□ -0.24
LDLR-204ENST00000545707 RND3P61587 244 aa13.52□□□□□ -0.24
LDLR-204ENST00000545707 RPS23P62266 143 aaKnown RBP13.52□□□□□ -0.24
LDLR-204ENST00000545707 ZNF266Q14584 549 aa13.52□□□□□ -0.24
LDLR-204ENST00000545707 MRPL21Q7Z2W9 205 aaKnown RBP13.52□□□□□ -0.24
LDLR-204ENST00000545707 WDR5BQ86VZ2 330 aa13.52□□□□□ -0.24
LDLR-204ENST00000545707 C17orf78Q8N4C9 275 aa13.52□□□□□ -0.24
LDLR-204ENST00000545707 PLPPR1Q8TBJ4 325 aa13.52□□□□□ -0.24
LDLR-204ENST00000545707 PSMF1Q92530 271 aa13.52□□□□□ -0.24
LDLR-204ENST00000545707 RDH5Q92781 318 aa13.52□□□□□ -0.24
LDLR-204ENST00000545707 LRFN1Q9P244 771 aa13.52□□□□□ -0.24
LDLR-204ENST00000545707 PCSK5Q92824 1860 aa13.52□□□□□ -0.25
LDLR-204ENST00000545707 UBE2CO00762 179 aa13.52□□□□□ -0.25
LDLR-204ENST00000545707 FGF12P61328 243 aa13.52□□□□□ -0.25
LDLR-204ENST00000545707 TRA2AQ13595 282 aaKnown RBP eCLIP13.52□□□□□ -0.25
LDLR-204ENST00000545707 TMEM105Q8N8V8 129 aa13.52□□□□□ -0.25
LDLR-204ENST00000545707 CT55Q8WUE5 264 aa13.52□□□□□ -0.25
LDLR-204ENST00000545707 TAAR9Q96RI9 348 aa13.52□□□□□ -0.25
LDLR-204ENST00000545707 FAM166BA8MTA8 275 aa13.51□□□□□ -0.25
LDLR-204ENST00000545707 PITX3O75364 302 aa13.51□□□□□ -0.25
LDLR-204ENST00000545707 C3AR1Q16581 482 aa13.51□□□□□ -0.25
LDLR-204ENST00000545707 NMSQ5H8A3 153 aa13.51□□□□□ -0.25
LDLR-204ENST00000545707 P4HA3Q7Z4N8 544 aa13.51□□□□□ -0.25
LDLR-204ENST00000545707 ZDHHC23Q8IYP9 409 aa13.51□□□□□ -0.25
LDLR-204ENST00000545707 OR51H1Q8NH63 302 aa13.51□□□□□ -0.25
LDLR-204ENST00000545707 UBALD1Q8TB05 177 aa13.51□□□□□ -0.25
LDLR-204ENST00000545707 TUBA4BQ9H853 241 aa13.51□□□□□ -0.25
LDLR-204ENST00000545707 ATPIF1Q9UII2 106 aa13.51□□□□□ -0.25
LDLR-204ENST00000545707 MMP24Q9Y5R2 645 aa13.51□□□□□ -0.25
LDLR-204ENST00000545707 ARGFXA6NJG6 315 aa13.51□□□□□ -0.25
LDLR-204ENST00000545707 H0YL77 283 aa13.51□□□□□ -0.25
LDLR-204ENST00000545707 TRAPPC2LH3BP13 241 aa13.51□□□□□ -0.25
LDLR-204ENST00000545707 SRPXP78539 464 aa13.51□□□□□ -0.25
LDLR-204ENST00000545707 CEACAM21Q3KPI0 293 aa13.51□□□□□ -0.25
LDLR-204ENST00000545707 FAM185AQ8N0U4 392 aa13.51□□□□□ -0.25
LDLR-204ENST00000545707 IL22RA1Q8N6P7 574 aa13.51□□□□□ -0.25
LDLR-204ENST00000545707 Q8NFD4 153 aa13.51□□□□□ -0.25
LDLR-204ENST00000545707 THOC3Q96J01 351 aaKnown RBP13.51□□□□□ -0.25
LDLR-204ENST00000545707 TECTBQ96PL2 329 aa13.51□□□□□ -0.25
LDLR-204ENST00000545707 DOCK10Q96BY6 2186 aa13.51□□□□□ -0.25
LDLR-204ENST00000545707 TXNL1O43396 289 aa13.5□□□□□ -0.25
LDLR-204ENST00000545707 OR2C1O95371 312 aa13.5□□□□□ -0.25
LDLR-204ENST00000545707 OR8U8P0C7N1 319 aa13.5□□□□□ -0.25
LDLR-204ENST00000545707 ZXDAP98168 799 aa13.5□□□□□ -0.25
LDLR-204ENST00000545707 ID3Q02535 119 aa13.5□□□□□ -0.25
LDLR-204ENST00000545707 RHEBQ15382 184 aa13.5□□□□□ -0.25
LDLR-204ENST00000545707 VASH2Q86V25 355 aa13.5□□□□□ -0.25
LDLR-204ENST00000545707 TAAR3PQ9P1P4 343 aa13.5□□□□□ -0.25
LDLR-204ENST00000545707 DNAJC13O75165 2243 aa13.5□□□□□ -0.25
LDLR-204ENST00000545707 PGLYRP1O75594 196 aaPredicted RBP13.5□□□□□ -0.25
LDLR-204ENST00000545707 PAX9P55771 341 aa13.5□□□□□ -0.25
LDLR-204ENST00000545707 DCAF12Q5T6F0 453 aa13.5□□□□□ -0.25
LDLR-204ENST00000545707 ZNF343Q6P1L6 599 aa13.5□□□□□ -0.25
LDLR-204ENST00000545707 MYPOPQ86VE0 399 aaPredicted RBP13.5□□□□□ -0.25
LDLR-204ENST00000545707 IL1F10Q8WWZ1 152 aa13.5□□□□□ -0.25
LDLR-204ENST00000545707 SPIN2AQ99865 258 aa13.5□□□□□ -0.25
LDLR-204ENST00000545707 SPIN2BQ9BPZ2 258 aa13.5□□□□□ -0.25
LDLR-204ENST00000545707 SLC25A31Q9H0C2 315 aa13.5□□□□□ -0.25
LDLR-204ENST00000545707 NIT2Q9NQR4 276 aa13.5□□□□□ -0.25
LDLR-204ENST00000545707 NBEAQ8NFP9 2946 aa13.49□□□□□ -0.25
LDLR-204ENST00000545707 LINC00587B1AMM8 73 aa13.49□□□□□ -0.25
LDLR-204ENST00000545707 H3BQ15 152 aa13.49□□□□□ -0.25
LDLR-204ENST00000545707 WRBO00258 174 aa13.49□□□□□ -0.25
LDLR-204ENST00000545707 TUSC2O75896 110 aa13.49□□□□□ -0.25
LDLR-204ENST00000545707 VDAC1P21796 283 aa13.49□□□□□ -0.25
LDLR-204ENST00000545707 UCP1P25874 307 aa13.49□□□□□ -0.25
LDLR-204ENST00000545707 PMELP40967 661 aa13.49□□□□□ -0.25
LDLR-204ENST00000545707 DUSP3P51452 185 aaPredicted RBP13.49□□□□□ -0.25
LDLR-204ENST00000545707 RAB1AP62820 205 aa13.49□□□□□ -0.25
LDLR-204ENST00000545707 NCMAPQ5T1S8 102 aa13.49□□□□□ -0.25
LDLR-204ENST00000545707 PCSK4Q6UW60 755 aa13.49□□□□□ -0.25
LDLR-204ENST00000545707 MKXQ8IYA7 352 aa13.49□□□□□ -0.25
LDLR-204ENST00000545707 PRR18Q8N4B5 295 aa13.49□□□□□ -0.25
LDLR-204ENST00000545707 LFNGQ8NES3 379 aa13.49□□□□□ -0.25
LDLR-204ENST00000545707 RAB39BQ96DA2 213 aa13.49□□□□□ -0.25
LDLR-204ENST00000545707 PLA2G3Q9NZ20 509 aa13.49□□□□□ -0.25
LDLR-204ENST00000545707 ATP23Q9Y6H3 246 aa13.49□□□□□ -0.25
LDLR-204ENST00000545707 URGCP-MRPS24S4R325 110 aa13.49□□□□□ -0.25
LDLR-204ENST00000545707 IGHV3-64DA0A0J9YX35 117 aa13.49□□□□□ -0.25
LDLR-204ENST00000545707 HSPA12AO43301 675 aa13.49□□□□□ -0.25
LDLR-204ENST00000545707 JMJD7P0C870 316 aa13.49□□□□□ -0.25
LDLR-204ENST00000545707 LHX2P50458 406 aa13.49□□□□□ -0.25
LDLR-204ENST00000545707 TMEM267Q0VDI3 215 aaPredicted RBP13.49□□□□□ -0.25
LDLR-204ENST00000545707 CYB561D1Q8N8Q1 229 aa13.49□□□□□ -0.25
LDLR-204ENST00000545707 MRPL30Q8TCC3 161 aaKnown RBP13.49□□□□□ -0.25
LDLR-204ENST00000545707 ERRFI1Q9UJM3 462 aaPredicted RBP13.49□□□□□ -0.25
LDLR-204ENST00000545707 IGHV2-5P01817 119 aa13.48□□□□□ -0.25
LDLR-204ENST00000545707 SERPINA7P05543 415 aa13.48□□□□□ -0.25
LDLR-204ENST00000545707 S100A9P06702 114 aaKnown RBP13.48□□□□□ -0.25
LDLR-204ENST00000545707 PSG2P11465 335 aa13.48□□□□□ -0.25
LDLR-204ENST00000545707 MAGEA5P43359 124 aa13.48□□□□□ -0.25
LDLR-204ENST00000545707 SPATA46Q5T0L3 261 aa13.48□□□□□ -0.25
LDLR-204ENST00000545707 TCEAL6Q6IPX3 200 aa13.48□□□□□ -0.25
LDLR-204ENST00000545707 Q6ZRM9 215 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms