RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 UBALD1Q8TB05 177 aa10.95□□□□□ -0.66
COL4A6-209ENST00000545689 PARD6AQ9NPB6 346 aa10.95□□□□□ -0.66
COL4A6-209ENST00000545689 IGLV1-36A0A0B4J1U3 117 aa10.95□□□□□ -0.66
COL4A6-209ENST00000545689 PGA4P0DJD7 388 aa10.95□□□□□ -0.66
COL4A6-209ENST00000545689 CCL4P13236 92 aa10.95□□□□□ -0.66
COL4A6-209ENST00000545689 TMEM50BP56557 158 aa10.95□□□□□ -0.66
COL4A6-209ENST00000545689 Q56UQ5 140 aa10.95□□□□□ -0.66
COL4A6-209ENST00000545689 ACSM6Q6P461 480 aa10.95□□□□□ -0.66
COL4A6-209ENST00000545689 RNF7Q9UBF6 113 aa10.95□□□□□ -0.66
COL4A6-209ENST00000545689 DHRS7CA6NNS2 312 aa10.95□□□□□ -0.66
COL4A6-209ENST00000545689 ZNF785A8K8V0 405 aa10.95□□□□□ -0.66
COL4A6-209ENST00000545689 MEOX2P50222 304 aa10.95□□□□□ -0.66
COL4A6-209ENST00000545689 TMEM183BQ1AE95 376 aa10.95□□□□□ -0.66
COL4A6-209ENST00000545689 CLEC12BQ2HXU8 276 aa10.95□□□□□ -0.66
COL4A6-209ENST00000545689 FDX2Q6P4F2 183 aa10.95□□□□□ -0.66
COL4A6-209ENST00000545689 SLC25A47Q6Q0C1 308 aa10.95□□□□□ -0.66
COL4A6-209ENST00000545689 DEFB124Q8NES8 71 aa10.95□□□□□ -0.66
COL4A6-209ENST00000545689 SF3B6Q9Y3B4 125 aaKnown RBP10.95□□□□□ -0.66
COL4A6-209ENST00000545689 LIPGQ9Y5X9 500 aa10.95□□□□□ -0.66
COL4A6-209ENST00000545689 IGHV3-43A0A0B4J1X8 118 aa10.95□□□□□ -0.66
COL4A6-209ENST00000545689 FCGR3AP08637 254 aa10.95□□□□□ -0.66
COL4A6-209ENST00000545689 IGHV3-43DP0DP04 118 aa10.95□□□□□ -0.66
COL4A6-209ENST00000545689 UCN2Q96RP3 112 aa10.95□□□□□ -0.66
COL4A6-209ENST00000545689 FZR1Q9UM11 496 aa10.95□□□□□ -0.66
COL4A6-209ENST00000545689 ZNF154Q13106 437 aa10.95□□□□□ -0.66
COL4A6-209ENST00000545689 ZNF260Q3ZCT1 412 aa10.95□□□□□ -0.66
COL4A6-209ENST00000545689 TCTEX1D1Q8N7M0 179 aa10.95□□□□□ -0.66
COL4A6-209ENST00000545689 VSIG10L2P0DP72 767 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 OR2T10Q8NGZ9 312 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 CTHRC1Q96CG8 243 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 IGHV1-45A0A0A0MS14 117 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 NPIPB13A6NJU9 1138 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 NPIPB4C9JG80 1138 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 J3QR89 54 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 UPK3AO75631 287 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 TSPO2Q5TGU0 170 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 FNDC7Q5VTL7 733 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 ADAMTS17Q8TE56 1095 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 TMEM37Q8WXS4 190 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 CHRNA10Q9GZZ6 450 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 ZNF665Q9H7R5 613 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 NKX2-6A6NCS4 301 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 SMIM6P0DI80 62 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 HNRNPA3P51991 378 aaKnown RBP10.94□□□□□ -0.66
COL4A6-209ENST00000545689 SPCS3P61009 180 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 PIGYQ3MUY2 71 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 RAB1BQ9H0U4 201 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 PRSS50Q9UI38 385 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 SIPA1L1O43166 1804 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 FCN1O00602 326 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 CEACAM21Q3KPI0 293 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 RFLNBQ8N5W9 214 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 AQP3Q92482 292 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 FAM74A7A6NL05 159 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 CDRT15L2A8MXV6 281 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 K7ESF4 209 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 SLC31A2O15432 143 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 FCARP24071 287 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 BTNL3Q6UXE8 466 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 PIPOXQ9P0Z9 390 aa10.94□□□□□ -0.66
COL4A6-209ENST00000545689 C11orf94C9JXX5 98 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 PMS2CLQ68D20 193 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 LYZL2Q7Z4W2 148 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 ADIPOR1Q96A54 375 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 CTXND1A0A1B0GTU2 59 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 NCBP2LA6PVI3 153 aaKnown RBP10.93□□□□□ -0.66
COL4A6-209ENST00000545689 M0R296 226 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 SMIM17P0DL12 118 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 FGF5P12034 268 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 KHDC3LQ587J8 217 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 DCAF10Q5QP82 559 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 TOMM20LQ6UXN7 152 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 ABHD3Q8WU67 409 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 RAB1CQ92928 201 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 GRAMD2BQ96HH9 432 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 TOX4O94842 621 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 FAM78BQ5VT40 261 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 ZNF519Q8TB69 540 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 BMP5P22003 454 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 FGF8P55075 233 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-209ENST00000545689 PRR13Q9NZ81 148 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 RALGAPA2Q2PPJ7 1873 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 H0Y980 276 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 CDIPTO14735 213 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 CD3EP07766 207 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 PMCHP20382 165 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 FGF12P61328 243 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 SLC23A3Q6PIS1 610 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 MS4A10Q96PG2 267 aa10.93□□□□□ -0.66
COL4A6-209ENST00000545689 ZNF385AQ96PM9 386 aaKnown RBP10.93□□□□□ -0.66
COL4A6-209ENST00000545689 C7orf77A4D0Y5 90 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 SULT1A2P50226 295 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 SLC35E3Q7Z769 313 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 PDPNQ86YL7 162 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 DDA1Q9BW61 102 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 LPAR5Q9H1C0 372 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 SLC7A10Q9NS82 523 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 UBE2L3P68036 154 aaKnown RBP10.92□□□□□ -0.66
COL4A6-209ENST00000545689 DLK1P80370 383 aa10.92□□□□□ -0.66
COL4A6-209ENST00000545689 SERF2P84101 59 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms