RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 TSPAN5P62079 268 aa11.5□□□□□ -0.57
SCARB1-209ENST00000545305 HLA-DRB3P79483 266 aa11.5□□□□□ -0.57
SCARB1-209ENST00000545305 PAX5Q02548 391 aa11.5□□□□□ -0.57
SCARB1-209ENST00000545305 AESQ08117 197 aa11.5□□□□□ -0.57
SCARB1-209ENST00000545305 CARTPTQ16568 116 aa11.5□□□□□ -0.57
SCARB1-209ENST00000545305 VAX1Q5SQQ9 334 aa11.5□□□□□ -0.57
SCARB1-209ENST00000545305 CCBE1Q6UXH8 406 aaPredicted RBP11.5□□□□□ -0.57
SCARB1-209ENST00000545305 GAPTQ8N292 157 aa11.5□□□□□ -0.57
SCARB1-209ENST00000545305 ARRDC1Q8N5I2 433 aa11.5□□□□□ -0.57
SCARB1-209ENST00000545305 FAM216BQ8N7L0 139 aa11.5□□□□□ -0.57
SCARB1-209ENST00000545305 ZNRF1Q8ND25 227 aa11.5□□□□□ -0.57
SCARB1-209ENST00000545305 OR4D10Q8NGI6 311 aa11.5□□□□□ -0.57
SCARB1-209ENST00000545305 OR51S1Q8NGJ8 323 aa11.5□□□□□ -0.57
SCARB1-209ENST00000545305 CCDC107Q8WV48 283 aa11.5□□□□□ -0.57
SCARB1-209ENST00000545305 OCEL1Q9H607 264 aa11.5□□□□□ -0.57
SCARB1-209ENST00000545305 KCNIP1Q9NZI2 227 aa11.5□□□□□ -0.57
SCARB1-209ENST00000545305 KIF25Q9UIL4 384 aa11.5□□□□□ -0.57
SCARB1-209ENST00000545305 MAB21L2Q9Y586 359 aa11.5□□□□□ -0.57
SCARB1-209ENST00000545305 SPTAN1Q13813 2472 aaKnown RBP11.5□□□□□ -0.57
SCARB1-209ENST00000545305 IGKV1D-8A0A087WSZ0 117 aa11.49□□□□□ -0.57
SCARB1-209ENST00000545305 FABP7O15540 132 aa11.49□□□□□ -0.57
SCARB1-209ENST00000545305 IGHV2-70P01814 119 aa11.49□□□□□ -0.57
SCARB1-209ENST00000545305 CCR6P51684 374 aa11.49□□□□□ -0.57
SCARB1-209ENST00000545305 P2RX3P56373 397 aa11.49□□□□□ -0.57
SCARB1-209ENST00000545305 EDDM3BP56851 147 aa11.49□□□□□ -0.57
SCARB1-209ENST00000545305 RBMS2Q15434 407 aaKnown RBP11.49□□□□□ -0.57
SCARB1-209ENST00000545305 SCGB2B2Q4G0G5 96 aa11.49□□□□□ -0.57
SCARB1-209ENST00000545305 PLA1AQ53H76 456 aa11.49□□□□□ -0.57
SCARB1-209ENST00000545305 C6orf183Q5T699 404 aa11.49□□□□□ -0.57
SCARB1-209ENST00000545305 ZNF880Q6PDB4 577 aa11.49□□□□□ -0.57
SCARB1-209ENST00000545305 TRAT1Q6PIZ9 186 aa11.49□□□□□ -0.57
SCARB1-209ENST00000545305 ZNF295-AS1Q8N0V1 137 aa11.49□□□□□ -0.57
SCARB1-209ENST00000545305 DUSP18Q8NEJ0 188 aa11.49□□□□□ -0.57
SCARB1-209ENST00000545305 COQ2Q96H96 371 aa11.49□□□□□ -0.57
SCARB1-209ENST00000545305 TMEM246Q9BRR3 403 aa11.49□□□□□ -0.57
SCARB1-209ENST00000545305 SHARPINQ9H0F6 387 aa11.49□□□□□ -0.57
SCARB1-209ENST00000545305 NUBP2Q9Y5Y2 271 aa11.49□□□□□ -0.57
SCARB1-209ENST00000545305 HRNRQ86YZ3 2850 aaPredicted RBP11.49□□□□□ -0.57
SCARB1-209ENST00000545305 NDUFB3O43676 98 aa11.48□□□□□ -0.57
SCARB1-209ENST00000545305 TCRBP04435 133 aa11.48□□□□□ -0.57
SCARB1-209ENST00000545305 CTXN2P0C2S0 81 aa11.48□□□□□ -0.57
SCARB1-209ENST00000545305 SELLP14151 372 aa11.48□□□□□ -0.57
SCARB1-209ENST00000545305 COL8A1P27658 744 aa11.48□□□□□ -0.57
SCARB1-209ENST00000545305 GLIPR1P48060 266 aa11.48□□□□□ -0.57
SCARB1-209ENST00000545305 TMEM33P57088 247 aa11.48□□□□□ -0.57
SCARB1-209ENST00000545305 LRRC10Q5BKY1 277 aa11.48□□□□□ -0.57
SCARB1-209ENST00000545305 AVPI1Q5T686 147 aa11.48□□□□□ -0.57
SCARB1-209ENST00000545305 Q6ZNX1 250 aa11.48□□□□□ -0.57
SCARB1-209ENST00000545305 Q6ZPA2 131 aa11.48□□□□□ -0.57
SCARB1-209ENST00000545305 IDO2Q6ZQW0 420 aa11.48□□□□□ -0.57
SCARB1-209ENST00000545305 GLCCI1Q86VQ1 547 aa11.48□□□□□ -0.57
SCARB1-209ENST00000545305 SPICQ8N5J4 248 aa11.48□□□□□ -0.57
SCARB1-209ENST00000545305 OR4A4PQ8NGN8 299 aa11.48□□□□□ -0.57
SCARB1-209ENST00000545305 IGFBPL1Q8WX77 278 aa11.48□□□□□ -0.57
SCARB1-209ENST00000545305 CREB3L1Q96BA8 519 aa11.48□□□□□ -0.57
SCARB1-209ENST00000545305 SLC6A7Q99884 636 aa11.48□□□□□ -0.57
SCARB1-209ENST00000545305 MMP28Q9H239 520 aa11.48□□□□□ -0.57
SCARB1-209ENST00000545305 BARX1Q9HBU1 254 aaPredicted RBP11.48□□□□□ -0.57
SCARB1-209ENST00000545305 MBNL3Q9NUK0 354 aaKnown RBP11.48□□□□□ -0.57
SCARB1-209ENST00000545305 SLC2A8Q9NY64 477 aa11.48□□□□□ -0.57
SCARB1-209ENST00000545305 SLC25A10Q9UBX3 287 aaPredicted RBP11.48□□□□□ -0.57
SCARB1-209ENST00000545305 TRAV39A0A0B4J263 110 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 A0A1B0GW55 424 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 ODAMA1E959 279 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 SDCBPO00560 298 aaPredicted RBP11.47□□□□□ -0.57
SCARB1-209ENST00000545305 NDUFB6O95139 128 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 ZNF735P0CB33 412 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 GSTT2P0CG29 244 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 DUX4L2P0CJ85 424 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 DUX4L3P0CJ86 424 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 DUX4L4P0CJ87 422 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 DUX4L5P0CJ88 424 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 DUX4L6P0CJ89 424 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 DUX4L7P0CJ90 424 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 OR5H8P0DN80 308 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 RPS2P15880 293 aaKnown RBP11.47□□□□□ -0.57
SCARB1-209ENST00000545305 NDUFB7P17568 137 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 RCC1P18754 421 aaPredicted RBP11.47□□□□□ -0.57
SCARB1-209ENST00000545305 ERP29P30040 261 aaKnown RBP11.47□□□□□ -0.57
SCARB1-209ENST00000545305 GPR6P46095 362 aaPredicted RBP11.47□□□□□ -0.57
SCARB1-209ENST00000545305 SEC61A1P61619 476 aaKnown RBP11.47□□□□□ -0.57
SCARB1-209ENST00000545305 HMGN3Q15651 99 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 TMEM155Q4W5P6 130 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 DUX4L9Q6RFH8 374 aaPredicted RBP11.47□□□□□ -0.57
SCARB1-209ENST00000545305 BTN2A1Q7KYR7 527 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 OVCH2Q7RTZ1 564 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 ZNF554Q86TJ5 538 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 TPRX1Q8N7U7 411 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 GINS4Q9BRT9 223 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 C20orf85Q9H1P6 137 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 NCOR1P1Q9H4R4 102 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 RAB9BQ9NP90 201 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 NUDT15Q9NV35 164 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 OR6C3Q9NZP0 311 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 KAAG1Q9UBP8 84 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 DUX4Q9UBX2 424 aa11.47□□□□□ -0.57
SCARB1-209ENST00000545305 CEACAM18A8MTB9 384 aa11.46□□□□□ -0.57
SCARB1-209ENST00000545305 TNFRSF13BO14836 293 aaPredicted RBP11.46□□□□□ -0.57
SCARB1-209ENST00000545305 BET1O15155 118 aa11.46□□□□□ -0.57
SCARB1-209ENST00000545305 NDUFS7O75251 213 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms