RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 TIMM29Q9BSF4 260 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 UCK1Q9HA47 277 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 C12orf10Q9HB07 376 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 SLC17A7Q9P2U7 560 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 PSMD13Q9UNM6 376 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 RPL26L1Q9UNX3 145 aaKnown RBP2.37□□□□□ -2.03
SCFD1-207ENST00000544052 HEY1Q9Y5J3 304 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 MYO7BQ6PIF6 2116 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 NCKAP5O14513 1909 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 CELSR2Q9HCU4 2923 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 ZNF469Q96JG9 3925 aaPredicted RBP2.37□□□□□ -2.03
SCFD1-207ENST00000544052 IGKV1-8A0A0C4DH67 115 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 SLC22A20A6NK97 555 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 RP2O75695 350 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 POP7O75817 140 aaKnown RBP2.37□□□□□ -2.03
SCFD1-207ENST00000544052 SC5DO75845 299 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 SLC25A14O95258 325 aaPredicted RBP2.37□□□□□ -2.03
SCFD1-207ENST00000544052 HPRT1P00492 218 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 CATP04040 527 aaKnown RBP2.37□□□□□ -2.03
SCFD1-207ENST00000544052 KRT7P08729 469 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 NELFEP18615 380 aaKnown RBP2.37□□□□□ -2.03
SCFD1-207ENST00000544052 TCN2P20062 427 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 RAB3AP20336 220 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 IL12BP29460 328 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 PEBP1P30086 187 aaKnown RBP2.37□□□□□ -2.03
SCFD1-207ENST00000544052 CDKN2DP55273 166 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 UBE2G2P60604 165 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 UBE2NP61088 152 aaKnown RBP2.37□□□□□ -2.03
SCFD1-207ENST00000544052 CACNG7P62955 275 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 DEFB116Q30KQ4 102 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 LCE3EQ5T5B0 92 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 AP1ARQ63HQ0 302 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 PPP1R2P3Q6NXS1 205 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 ULK3Q6PHR2 472 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 FAM151BQ6UXP7 276 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 LINC00336Q6ZUF6 198 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 PID1Q7Z2X4 250 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 SH2D6Q7Z4S9 175 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 NT5DC3Q86UY8 548 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 CYP4Z1Q86W10 505 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 ST13P4Q8IZP2 240 aaPredicted RBP2.37□□□□□ -2.03
SCFD1-207ENST00000544052 OR10G6Q8NH81 332 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 ABHD3Q8WU67 409 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 BAALCQ8WXS3 180 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 SGTBQ96EQ0 304 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 QKIQ96PU8 341 aaKnown RBP eCLIP2.37□□□□□ -2.038e-7■■■■■ 54.9
SCFD1-207ENST00000544052 TIMM17AQ99595 171 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 NUDT9Q9BW91 350 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 MAP1LC3CQ9BXW4 147 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 BEX2Q9BXY8 128 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 ULBP3Q9BZM4 244 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 SLIRPQ9GZT3 109 aaKnown RBP2.37□□□□□ -2.03
SCFD1-207ENST00000544052 PATZ1Q9HBE1 687 aaKnown RBP2.37□□□□□ -2.03
SCFD1-207ENST00000544052 FAM60AQ9NP50 221 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 LHX9Q9NQ69 397 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 CLEC2DQ9UHP7 191 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 MRM2Q9UI43 246 aaKnown RBP2.37□□□□□ -2.03
SCFD1-207ENST00000544052 ZNF222Q9UK12 451 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 ARL5AQ9Y689 179 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 PDZD2O15018 2839 aa2.37□□□□□ -2.03
SCFD1-207ENST00000544052 TEP1Q99973 2627 aaKnown RBP2.36□□□□□ -2.03
SCFD1-207ENST00000544052 LRBAP50851 2863 aa2.36□□□□□ -2.03
SCFD1-207ENST00000544052 IGLV3-16A0A075B6K0 115 aa2.36□□□□□ -2.03
SCFD1-207ENST00000544052 A0A0J9YXV3 536 aa2.36□□□□□ -2.03
SCFD1-207ENST00000544052 OR51F1A6NGY5 319 aa2.36□□□□□ -2.03
SCFD1-207ENST00000544052 CST8O60676 142 aa2.36□□□□□ -2.03
SCFD1-207ENST00000544052 SLC19A2O60779 497 aa2.36□□□□□ -2.03
SCFD1-207ENST00000544052 SPAM1P38567 509 aa2.36□□□□□ -2.03
SCFD1-207ENST00000544052 ZNF140P52738 457 aaPredicted RBP2.36□□□□□ -2.03
SCFD1-207ENST00000544052 OR2B6P58173 313 aa2.36□□□□□ -2.03
SCFD1-207ENST00000544052 TNXAQ16473 311 aa2.36□□□□□ -2.03
SCFD1-207ENST00000544052 C5orf64Q2M2E5 130 aa2.36□□□□□ -2.03
SCFD1-207ENST00000544052 PRSS58Q8IYP2 241 aa2.36□□□□□ -2.03
SCFD1-207ENST00000544052 PIFOQ8TCI5 191 aa2.36□□□□□ -2.03
SCFD1-207ENST00000544052 RGP1Q92546 391 aaPredicted RBP2.36□□□□□ -2.03
SCFD1-207ENST00000544052 FAM104AQ969W3 186 aa2.36□□□□□ -2.03
SCFD1-207ENST00000544052 FAM210AQ96ND0 272 aa2.36□□□□□ -2.03
SCFD1-207ENST00000544052 NDEL1Q9GZM8 345 aa2.36□□□□□ -2.03
SCFD1-207ENST00000544052 OR52A5Q9H2C5 316 aa2.36□□□□□ -2.03
SCFD1-207ENST00000544052 FAM96AQ9H5X1 160 aa2.36□□□□□ -2.03
SCFD1-207ENST00000544052 WDR55Q9H6Y2 383 aaPredicted RBP2.36□□□□□ -2.03
SCFD1-207ENST00000544052 BTRCQ9Y297 605 aa2.36□□□□□ -2.03
SCFD1-207ENST00000544052 CENPEQ02224 2701 aa2.36□□□□□ -2.03
SCFD1-207ENST00000544052 FREM3P0C091 2139 aa2.36□□□□□ -2.03
SCFD1-207ENST00000544052 ABCA12Q86UK0 2595 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 SMIM26A0A096LP01 95 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 ARGFXA6NJG6 315 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 OR5K4A6NMS3 321 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 ANKRD65E5RJM6 399 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 TOX3O15405 576 aaPredicted RBP2.35□□□□□ -2.03
SCFD1-207ENST00000544052 ALOX12BO75342 701 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 KLF7O75840 302 aaPredicted RBP2.35□□□□□ -2.03
SCFD1-207ENST00000544052 SSTR5P35346 364 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 KIR3DL2P43630 455 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 HAAOP46952 286 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 PRLHRP49683 370 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 ARG2P78540 354 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 DEFB110Q30KQ9 67 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 ORMDL2Q53FV1 153 aa2.35□□□□□ -2.03
SCFD1-207ENST00000544052 WDR82Q6UXN9 313 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms