RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 A0A1W2PRV1 198 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 FOXI3A8MTJ6 420 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 ZNF701M0R085 212 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 RAB27BO00194 218 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 ZNF728P0DKX0 622 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 GNB3P16520 340 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 HNF1AP20823 631 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 GLP1RP43220 463 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 PAX5Q02548 391 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 PLAC9Q5JTB6 97 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 FAM120AOSQ5T036 256 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 ZNF497Q6ZNH5 498 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 TCF23Q7RTU1 214 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 RTN4RL2Q86UN3 420 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 KIR3DL3Q8N743 410 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 OR4K15Q8NH41 348 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 CCDC107Q8WV48 283 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 SLC25A38Q96DW6 304 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 CYYR1Q96J86 154 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 ZMAT3Q9HA38 289 aaKnown RBP11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 CHMP1AQ9HD42 196 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 CCDC59Q9P031 241 aaKnown RBP11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 TRAPPC2LQ9UL33 140 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 HIVEP1P15822 2718 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 CSPG4Q6UVK1 2322 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 M0R1W7 72 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 CA11O75493 328 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 AVPP01185 164 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 MT-ND4P03905 459 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 MRPS15P82914 257 aaKnown RBP11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 DYNC1I2Q13409 638 aaKnown RBP11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 IL17RELQ6ZVW7 336 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 DGCR14Q96DF8 476 aaKnown RBP11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 S100A16Q96FQ6 103 aaKnown RBP11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 DCUN1D5Q9BTE7 237 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 SIRPDQ9H106 197 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 GAL3ST2Q9H3Q3 398 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 NCOR1P1Q9H4R4 102 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 DIABLOQ9NR28 239 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 SIRT7Q9NRC8 400 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 TMEM160Q9NX00 188 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 AK3Q9UIJ7 227 aa11.91□□□□□ -0.5
TNFRSF1A-216ENST00000543995 TRAV39A0A0B4J263 110 aa11.9□□□□□ -0.5
TNFRSF1A-216ENST00000543995 INAFM1C9JVW0 142 aa11.9□□□□□ -0.5
TNFRSF1A-216ENST00000543995 RGS5O15539 181 aa11.9□□□□□ -0.5
TNFRSF1A-216ENST00000543995 HPGDSO60760 199 aa11.9□□□□□ -0.5
TNFRSF1A-216ENST00000543995 HIST1H1DP16402 221 aaKnown RBP11.9□□□□□ -0.5
TNFRSF1A-216ENST00000543995 ARL6IP1Q15041 203 aa11.9□□□□□ -0.5
TNFRSF1A-216ENST00000543995 VMO1Q7Z5L0 202 aa11.9□□□□□ -0.5
TNFRSF1A-216ENST00000543995 OR13A1Q8NGR1 328 aa11.9□□□□□ -0.5
TNFRSF1A-216ENST00000543995 SETD6Q8TBK2 473 aa11.9□□□□□ -0.5
TNFRSF1A-216ENST00000543995 MRGPRDQ8TDS7 321 aa11.9□□□□□ -0.5
TNFRSF1A-216ENST00000543995 CORO2AQ92828 525 aa11.9□□□□□ -0.5
TNFRSF1A-216ENST00000543995 CMSS1Q9BQ75 279 aaKnown RBP11.9□□□□□ -0.5
TNFRSF1A-216ENST00000543995 ABCG5Q9H222 651 aa11.9□□□□□ -0.5
TNFRSF1A-216ENST00000543995 METTL8Q9H825 291 aaKnown RBP11.9□□□□□ -0.5
TNFRSF1A-216ENST00000543995 TAS2R3Q9NYW6 316 aa11.9□□□□□ -0.5
TNFRSF1A-216ENST00000543995 ZNF729A6NN14 1252 aaPredicted RBP11.89□□□□□ -0.51
TNFRSF1A-216ENST00000543995 FAM25AB3EWG3 89 aa11.89□□□□□ -0.51
TNFRSF1A-216ENST00000543995 FAM25CB3EWG5 89 aa11.89□□□□□ -0.51
TNFRSF1A-216ENST00000543995 FAM25GB3EWG6 89 aa11.89□□□□□ -0.51
TNFRSF1A-216ENST00000543995 EIF4EP06730 217 aaKnown RBP11.89□□□□□ -0.51
TNFRSF1A-216ENST00000543995 CD3GP09693 182 aa11.89□□□□□ -0.51
TNFRSF1A-216ENST00000543995 MMP9P14780 707 aa11.89□□□□□ -0.51
TNFRSF1A-216ENST00000543995 SRP14P37108 136 aaKnown RBP11.89□□□□□ -0.51
TNFRSF1A-216ENST00000543995 ARFRP1Q13795 201 aa11.89□□□□□ -0.51
TNFRSF1A-216ENST00000543995 OLFML2AQ68BL7 652 aa11.89□□□□□ -0.51
TNFRSF1A-216ENST00000543995 C1orf122Q6ZSJ8 110 aa11.89□□□□□ -0.51
TNFRSF1A-216ENST00000543995 TEX29Q8N6K0 151 aa11.89□□□□□ -0.51
TNFRSF1A-216ENST00000543995 Q8N7P7 452 aa11.89□□□□□ -0.51
TNFRSF1A-216ENST00000543995 DTX3Q8N9I9 347 aa11.89□□□□□ -0.51
TNFRSF1A-216ENST00000543995 NANPQ8TBE9 248 aa11.89□□□□□ -0.51
TNFRSF1A-216ENST00000543995 CMTM3Q96MX0 182 aa11.89□□□□□ -0.51
TNFRSF1A-216ENST00000543995 TBX15Q96SF7 602 aa11.89□□□□□ -0.51
TNFRSF1A-216ENST00000543995 BEX2Q9BXY8 128 aa11.89□□□□□ -0.51
TNFRSF1A-216ENST00000543995 BATF3Q9NR55 127 aa11.89□□□□□ -0.51
TNFRSF1A-216ENST00000543995 OPN4Q9UHM6 478 aa11.89□□□□□ -0.51
TNFRSF1A-216ENST00000543995 KCNK7Q9Y2U2 307 aa11.89□□□□□ -0.51
TNFRSF1A-216ENST00000543995 ZANQ9Y493 2812 aa11.89□□□□□ -0.51
TNFRSF1A-216ENST00000543995 TRAV18A0A075B6X5 111 aa11.88□□□□□ -0.51
TNFRSF1A-216ENST00000543995 A0A0A6YYH2 397 aa11.88□□□□□ -0.51
TNFRSF1A-216ENST00000543995 TRAV40A0A0B4J280 105 aa11.88□□□□□ -0.51
TNFRSF1A-216ENST00000543995 A6NJ64 397 aa11.88□□□□□ -0.51
TNFRSF1A-216ENST00000543995 SERPINE3A8MV23 424 aa11.88□□□□□ -0.51
TNFRSF1A-216ENST00000543995 C17orf98A8MV24 154 aa11.88□□□□□ -0.51
TNFRSF1A-216ENST00000543995 MFNGO00587 321 aa11.88□□□□□ -0.51
TNFRSF1A-216ENST00000543995 CLPXO76031 633 aa11.88□□□□□ -0.51
TNFRSF1A-216ENST00000543995 APOA1P02647 267 aa11.88□□□□□ -0.51
TNFRSF1A-216ENST00000543995 CDK2P24941 298 aa11.88□□□□□ -0.51
TNFRSF1A-216ENST00000543995 DLX1P56177 255 aa11.88□□□□□ -0.51
TNFRSF1A-216ENST00000543995 DLX6P56179 175 aa11.88□□□□□ -0.51
TNFRSF1A-216ENST00000543995 ERVFRD-1P60508 538 aa11.88□□□□□ -0.51
TNFRSF1A-216ENST00000543995 PRB3Q04118 309 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF1A-216ENST00000543995 CDNFQ49AH0 187 aa11.88□□□□□ -0.51
TNFRSF1A-216ENST00000543995 ZNF782Q6ZMW2 699 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF1A-216ENST00000543995 C1orf229Q6ZS94 237 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF1A-216ENST00000543995 MRPL30Q8TCC3 161 aaKnown RBP11.88□□□□□ -0.51
TNFRSF1A-216ENST00000543995 LHX4Q969G2 390 aa11.88□□□□□ -0.51
TNFRSF1A-216ENST00000543995 UPRTQ96BW1 309 aa11.88□□□□□ -0.51
TNFRSF1A-216ENST00000543995 HDHD3Q9BSH5 251 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms