RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 IL36GQ9NZH8 169 aa10.47□□□□□ -0.73
RTN3-213ENST00000543552 CKLFQ9UBR5 152 aa10.47□□□□□ -0.73
RTN3-213ENST00000543552 TRAV24A0A0B4J272 114 aa10.46□□□□□ -0.73
RTN3-213ENST00000543552 ZNF780AO75290 641 aaPredicted RBP10.46□□□□□ -0.73
RTN3-213ENST00000543552 OR7C1O76099 320 aaPredicted RBP10.46□□□□□ -0.73
RTN3-213ENST00000543552 PRB2P02812 416 aaPredicted RBP10.46□□□□□ -0.73
RTN3-213ENST00000543552 LIMS3P0CW19 117 aa10.46□□□□□ -0.73
RTN3-213ENST00000543552 LIMS4P0CW20 117 aa10.46□□□□□ -0.73
RTN3-213ENST00000543552 LOXL3P58215 753 aa10.46□□□□□ -0.73
RTN3-213ENST00000543552 HES1Q14469 280 aa10.46□□□□□ -0.73
RTN3-213ENST00000543552 NHLRC3Q5JS37 347 aa10.46□□□□□ -0.73
RTN3-213ENST00000543552 OSR2Q8N2R0 312 aa10.46□□□□□ -0.73
RTN3-213ENST00000543552 WFDC9Q8NEX5 89 aa10.46□□□□□ -0.73
RTN3-213ENST00000543552 Q8NFD4 153 aa10.46□□□□□ -0.73
RTN3-213ENST00000543552 OR13A1Q8NGR1 328 aa10.46□□□□□ -0.73
RTN3-213ENST00000543552 OR56B4Q8NH76 319 aa10.46□□□□□ -0.73
RTN3-213ENST00000543552 MYDGFQ969H8 173 aa10.46□□□□□ -0.73
RTN3-213ENST00000543552 DPCDQ9BVM2 203 aaPredicted RBP10.46□□□□□ -0.73
RTN3-213ENST00000543552 GPR61Q9BZJ8 451 aa10.46□□□□□ -0.73
RTN3-213ENST00000543552 IFT22Q9H7X7 185 aa10.46□□□□□ -0.73
RTN3-213ENST00000543552 RAB9BQ9NP90 201 aa10.46□□□□□ -0.73
RTN3-213ENST00000543552 CHCHD3Q9NX63 227 aaKnown RBP10.46□□□□□ -0.73
RTN3-213ENST00000543552 SMPD3Q9NY59 655 aaPredicted RBP10.46□□□□□ -0.73
RTN3-213ENST00000543552 ST3GAL6Q9Y274 331 aa10.46□□□□□ -0.73
RTN3-213ENST00000543552 TMEM30CPA0ZSE6 113 aa10.45□□□□□ -0.74
RTN3-213ENST00000543552 NPIPB11E5RHQ5 1161 aa10.45□□□□□ -0.74
RTN3-213ENST00000543552 HTR3BO95264 441 aa10.45□□□□□ -0.74
RTN3-213ENST00000543552 SNRNP70P08621 437 aaKnown RBP10.45□□□□□ -0.74
RTN3-213ENST00000543552 CGB3P0DN86 165 aa10.45□□□□□ -0.74
RTN3-213ENST00000543552 CGB7P0DN87 165 aa10.45□□□□□ -0.74
RTN3-213ENST00000543552 TMEM11P17152 192 aa10.45□□□□□ -0.74
RTN3-213ENST00000543552 GZMHP20718 246 aa10.45□□□□□ -0.74
RTN3-213ENST00000543552 BDKRB2P30411 391 aa10.45□□□□□ -0.74
RTN3-213ENST00000543552 ZNF93P35789 620 aaPredicted RBP10.45□□□□□ -0.74
RTN3-213ENST00000543552 GTF2A1P52655 376 aaPredicted RBP10.45□□□□□ -0.74
RTN3-213ENST00000543552 RBM11P57052 281 aaKnown RBP10.45□□□□□ -0.74
RTN3-213ENST00000543552 MPV17LQ2QL34 196 aa10.45□□□□□ -0.74
RTN3-213ENST00000543552 PIGYQ3MUY2 71 aa10.45□□□□□ -0.74
RTN3-213ENST00000543552 DDI2Q5TDH0 399 aa10.45□□□□□ -0.74
RTN3-213ENST00000543552 RSBN1Q5VWQ0 802 aaPredicted RBP10.45□□□□□ -0.74
RTN3-213ENST00000543552 ASCL4Q6XD76 172 aa10.45□□□□□ -0.74
RTN3-213ENST00000543552 OR51D1Q8NGF3 324 aa10.45□□□□□ -0.74
RTN3-213ENST00000543552 OR51A2Q8NGJ7 313 aa10.45□□□□□ -0.74
RTN3-213ENST00000543552 OR10K1Q8NGX5 313 aa10.45□□□□□ -0.74
RTN3-213ENST00000543552 OR52N1Q8NH53 320 aa10.45□□□□□ -0.74
RTN3-213ENST00000543552 MRGPRDQ8TDS7 321 aa10.45□□□□□ -0.74
RTN3-213ENST00000543552 APH1BQ8WW43 257 aa10.45□□□□□ -0.74
RTN3-213ENST00000543552 RGP1Q92546 391 aaPredicted RBP10.45□□□□□ -0.74
RTN3-213ENST00000543552 SMIM19Q96E16 107 aa10.45□□□□□ -0.74
RTN3-213ENST00000543552 RCC1LQ96I51 464 aaKnown RBP10.45□□□□□ -0.74
RTN3-213ENST00000543552 SLC29A1Q99808 456 aa10.45□□□□□ -0.74
RTN3-213ENST00000543552 SPACA1Q9HBV2 294 aa10.45□□□□□ -0.74
RTN3-213ENST00000543552 PSG11Q9UQ72 335 aa10.45□□□□□ -0.74
RTN3-213ENST00000543552 ZNF281Q9Y2X9 895 aa10.45□□□□□ -0.74
RTN3-213ENST00000543552 EXOSC1Q9Y3B2 195 aaKnown RBP10.45□□□□□ -0.74
RTN3-213ENST00000543552 A0A1W2PPI3 338 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 PSMB11A5LHX3 300 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 FAM90A18PA6NE21 464 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 FAM90A16PA6NEW6 464 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 FAM90A20PA6NIJ5 464 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 FAM90A9PA6NNJ1 464 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 FAM90A12PA8MX19 464 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 FAM90A5PA8MXJ8 464 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 FGF16O43320 207 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 BAG2O95816 211 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 AMY1AP04745 511 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 AMY2AP04746 511 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 FAM90A15PP0C7V4 464 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 FAM90A13PP0C7W8 464 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 FAM90A14PP0C7W9 464 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 FAM90A24PP0C7X0 464 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 SLC6A1P30531 599 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 SSTR5P35346 364 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 GNG10P50151 68 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 RIPK1Q13546 671 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 GPR176Q14439 515 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 LTC4SQ16873 150 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 TCTEX1D4Q5JR98 221 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 STX19Q8N4C7 294 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 DRAM1Q8N682 238 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 SUMF2Q8NBJ7 301 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 SETD9Q8NE22 299 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 CHPT1Q8WUD6 406 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 DPF1Q92782 380 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 C8orf4Q9NR00 106 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 AURKAIP1Q9NWT8 199 aaPredicted RBP10.44□□□□□ -0.74
RTN3-213ENST00000543552 BABAM2Q9NXR7 383 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 ING4Q9UNL4 249 aa10.44□□□□□ -0.74
RTN3-213ENST00000543552 DIMT1Q9UNQ2 313 aaKnown RBP10.44□□□□□ -0.74
RTN3-213ENST00000543552 EBAG9O00559 213 aa10.43□□□□□ -0.74
RTN3-213ENST00000543552 HSD17B6O14756 317 aa10.43□□□□□ -0.74
RTN3-213ENST00000543552 WBP4O75554 376 aaKnown RBP10.43□□□□□ -0.74
RTN3-213ENST00000543552 CDRT1O95170 752 aa10.43□□□□□ -0.74
RTN3-213ENST00000543552 GTF2F2P13984 249 aa10.43□□□□□ -0.74
RTN3-213ENST00000543552 IGLL1P15814 213 aa10.43□□□□□ -0.74
RTN3-213ENST00000543552 SERPINA2P20848 420 aa10.43□□□□□ -0.74
RTN3-213ENST00000543552 IL3RAP26951 378 aa10.43□□□□□ -0.74
RTN3-213ENST00000543552 ETV1P50549 477 aa10.43□□□□□ -0.74
RTN3-213ENST00000543552 SLC35B1P78383 322 aa10.43□□□□□ -0.74
RTN3-213ENST00000543552 SMN1Q16637 294 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms