RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 TPPPO94811 219 aa10.04□□□□□ -0.8
DDX55-210ENST00000543016 APOA1P02647 267 aa10.04□□□□□ -0.8
DDX55-210ENST00000543016 MT-ND4P03905 459 aa10.04□□□□□ -0.8
DDX55-210ENST00000543016 GSTP1P09211 210 aaKnown RBP10.04□□□□□ -0.8
DDX55-210ENST00000543016 ZNF728P0DKX0 622 aa10.04□□□□□ -0.8
DDX55-210ENST00000543016 EFNB2P52799 333 aa10.04□□□□□ -0.8
DDX55-210ENST00000543016 ATXN7L3Q14CW9 347 aaPredicted RBP10.04□□□□□ -0.8
DDX55-210ENST00000543016 ZNF497Q6ZNH5 498 aa10.04□□□□□ -0.8
DDX55-210ENST00000543016 FGFRL1Q8N441 504 aa10.04□□□□□ -0.8
DDX55-210ENST00000543016 BPIFB2Q8N4F0 458 aa10.04□□□□□ -0.8
DDX55-210ENST00000543016 SAMD12Q8N8I0 201 aa10.04□□□□□ -0.8
DDX55-210ENST00000543016 COQ2Q96H96 371 aa10.04□□□□□ -0.8
DDX55-210ENST00000543016 ZNF714Q96N38 554 aa10.04□□□□□ -0.8
DDX55-210ENST00000543016 GAL3ST2Q9H3Q3 398 aa10.04□□□□□ -0.8
DDX55-210ENST00000543016 METTL8Q9H825 291 aaKnown RBP10.04□□□□□ -0.8
DDX55-210ENST00000543016 C19orf12Q9NSK7 152 aa10.04□□□□□ -0.8
DDX55-210ENST00000543016 MGAT4AQ9UM21 535 aa10.04□□□□□ -0.8
DDX55-210ENST00000543016 A0A075B6Q4 140 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 TRBV6-6A0A0A6YYG2 114 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 DPPA5A6NC42 116 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 ZNF729A6NN14 1252 aaPredicted RBP10.03□□□□□ -0.8
DDX55-210ENST00000543016 C17orf98A8MV24 154 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 ORC5O43913 435 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 HIST1H1DP16402 221 aaKnown RBP10.03□□□□□ -0.8
DDX55-210ENST00000543016 PRTN3P24158 256 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 GLIPR1P48060 266 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 TMEM50BP56557 158 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 BPIFB3P59826 476 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 MRPS15P82914 257 aaKnown RBP10.03□□□□□ -0.8
DDX55-210ENST00000543016 PITPNAQ00169 270 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 SCGB2A2Q13296 93 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 PNLIPRP3Q17RR3 467 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 TMEM30BQ3MIR4 351 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 C6orf183Q5T699 404 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 NCR3LG1Q68D85 454 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 METAP1DQ6UB28 335 aaPredicted RBP10.03□□□□□ -0.8
DDX55-210ENST00000543016 MOB1BQ7L9L4 216 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 C6orf201Q7Z4U5 140 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 TRAPPC6BQ86SZ2 158 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 OR4M1Q8NGD0 313 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 OR10A7Q8NGE5 316 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 OR5H6Q8NGV6 325 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 UPRTQ96BW1 309 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 ARHGAP5-AS1Q96IT6 56 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 WDFY2Q96P53 400 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 SULT4A1Q9BR01 284 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 FAAP24Q9BTP7 215 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 PECRQ9BY49 303 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 TMPRSS13Q9BYE2 586 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 LINC00574Q9H8X3 128 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 KIF25Q9UIL4 384 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 ADAM30Q9UKF2 790 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 A3GALT2U3KPV4 340 aa10.03□□□□□ -0.8
DDX55-210ENST00000543016 UBE2QL1A1L167 161 aa10.02□□□□□ -0.81
DDX55-210ENST00000543016 MFNGO00587 321 aa10.02□□□□□ -0.81
DDX55-210ENST00000543016 XRCC3O43542 346 aa10.02□□□□□ -0.81
DDX55-210ENST00000543016 TOX4O94842 621 aa10.02□□□□□ -0.81
DDX55-210ENST00000543016 ERVFRD-1P60508 538 aa10.02□□□□□ -0.81
DDX55-210ENST00000543016 ARF6P62330 175 aa10.02□□□□□ -0.81
DDX55-210ENST00000543016 PLA2G7Q13093 441 aa10.02□□□□□ -0.81
DDX55-210ENST00000543016 PLAC9Q5JTB6 97 aa10.02□□□□□ -0.81
DDX55-210ENST00000543016 OR52W1Q6IF63 320 aa10.02□□□□□ -0.81
DDX55-210ENST00000543016 NANPQ8TBE9 248 aa10.02□□□□□ -0.81
DDX55-210ENST00000543016 PLPPR1Q8TBJ4 325 aa10.02□□□□□ -0.81
DDX55-210ENST00000543016 C15orf40Q8WUR7 153 aa10.02□□□□□ -0.81
DDX55-210ENST00000543016 SLC25A38Q96DW6 304 aa10.02□□□□□ -0.81
DDX55-210ENST00000543016 SMR3AQ99954 134 aa10.02□□□□□ -0.81
DDX55-210ENST00000543016 SIRPDQ9H106 197 aa10.02□□□□□ -0.81
DDX55-210ENST00000543016 HEXA-AS1Q9H8Q6 139 aa10.02□□□□□ -0.81
DDX55-210ENST00000543016 C12orf4Q9NQ89 552 aa10.02□□□□□ -0.81
DDX55-210ENST00000543016 KCNIP1Q9NZI2 227 aa10.02□□□□□ -0.81
DDX55-210ENST00000543016 ZNF581Q9P0T4 197 aa10.02□□□□□ -0.81
DDX55-210ENST00000543016 ONECUT1Q9UBC0 465 aa10.02□□□□□ -0.81
DDX55-210ENST00000543016 COMMD3Q9UBI1 195 aa10.02□□□□□ -0.81
DDX55-210ENST00000543016 RABL2AQ9UBK7 228 aaPredicted RBP10.02□□□□□ -0.81
DDX55-210ENST00000543016 CDC42EP3Q9UKI2 254 aa10.02□□□□□ -0.81
DDX55-210ENST00000543016 TRAPPC2LQ9UL33 140 aa10.02□□□□□ -0.81
DDX55-210ENST00000543016 RABL2BQ9UNT1 228 aa10.02□□□□□ -0.81
DDX55-210ENST00000543016 ARHGAP32A7KAX9 2087 aa10.02□□□□□ -0.81
DDX55-210ENST00000543016 VPS13CQ709C8 3753 aa10.01□□□□□ -0.81
DDX55-210ENST00000543016 KBTBD11-OT1A0A1B0GTJ5 212 aa10.01□□□□□ -0.81
DDX55-210ENST00000543016 A6NHS1 94 aa10.01□□□□□ -0.81
DDX55-210ENST00000543016 CLPXO76031 633 aa10.01□□□□□ -0.81
DDX55-210ENST00000543016 NAPSAO96009 420 aa10.01□□□□□ -0.81
DDX55-210ENST00000543016 CD3GP09693 182 aa10.01□□□□□ -0.81
DDX55-210ENST00000543016 CGB3P0DN86 165 aa10.01□□□□□ -0.81
DDX55-210ENST00000543016 CGB7P0DN87 165 aa10.01□□□□□ -0.81
DDX55-210ENST00000543016 MMP9P14780 707 aa10.01□□□□□ -0.81
DDX55-210ENST00000543016 DLX6P56179 175 aa10.01□□□□□ -0.81
DDX55-210ENST00000543016 GUCA2AQ02747 115 aa10.01□□□□□ -0.81
DDX55-210ENST00000543016 ZNF273Q14593 569 aa10.01□□□□□ -0.81
DDX55-210ENST00000543016 SRSF7Q16629 238 aaKnown RBP eCLIP10.01□□□□□ -0.81
DDX55-210ENST00000543016 CDNFQ49AH0 187 aa10.01□□□□□ -0.81
DDX55-210ENST00000543016 FAM120AOSQ5T036 256 aa10.01□□□□□ -0.81
DDX55-210ENST00000543016 BRICD5Q6PL45 260 aa10.01□□□□□ -0.81
DDX55-210ENST00000543016 HEPN1Q6WQI6 88 aa10.01□□□□□ -0.81
DDX55-210ENST00000543016 TPRX1Q8N7U7 411 aa10.01□□□□□ -0.81
DDX55-210ENST00000543016 CMSS1Q9BQ75 279 aaKnown RBP10.01□□□□□ -0.81
DDX55-210ENST00000543016 SLIRPQ9GZT3 109 aaKnown RBP10.01□□□□□ -0.81
DDX55-210ENST00000543016 NXF2Q9GZY0 626 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms