RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 FAM25CB3EWG5 89 aa17.13■□□□□ 0.33
OTUB1-211ENST00000543004 FAM25GB3EWG6 89 aa17.13■□□□□ 0.33
OTUB1-211ENST00000543004 GLAP06280 429 aa17.13■□□□□ 0.33
OTUB1-211ENST00000543004 KCNJ3P48549 501 aa17.13■□□□□ 0.33
OTUB1-211ENST00000543004 ARF6P62330 175 aa17.13■□□□□ 0.33
OTUB1-211ENST00000543004 ZNF260Q3ZCT1 412 aa17.13■□□□□ 0.33
OTUB1-211ENST00000543004 SLC35E4Q6ICL7 350 aa17.13■□□□□ 0.33
OTUB1-211ENST00000543004 PHF21AQ96BD5 680 aa17.13■□□□□ 0.33
OTUB1-211ENST00000543004 TRAV20A0A0B4J274 112 aa17.12■□□□□ 0.33
OTUB1-211ENST00000543004 TMEM30CPA0ZSE6 113 aa17.12■□□□□ 0.33
OTUB1-211ENST00000543004 TMEM235A6NFC5 223 aa17.12■□□□□ 0.33
OTUB1-211ENST00000543004 ENSAO43768 121 aaKnown RBP17.12■□□□□ 0.33
OTUB1-211ENST00000543004 LY6G6DO95868 133 aa17.12■□□□□ 0.33
OTUB1-211ENST00000543004 PAX5Q02548 391 aa17.12■□□□□ 0.33
OTUB1-211ENST00000543004 PRB3Q04118 309 aaPredicted RBP17.12■□□□□ 0.33
OTUB1-211ENST00000543004 DCAF12L2Q5VW00 463 aa17.12■□□□□ 0.33
OTUB1-211ENST00000543004 GLCCI1Q86VQ1 547 aa17.12■□□□□ 0.33
OTUB1-211ENST00000543004 MRPL30Q8TCC3 161 aaKnown RBP17.12■□□□□ 0.33
OTUB1-211ENST00000543004 MRGPRDQ8TDS7 321 aa17.12■□□□□ 0.33
OTUB1-211ENST00000543004 GCDHQ92947 438 aaPredicted RBP17.12■□□□□ 0.33
OTUB1-211ENST00000543004 CMTM3Q96MX0 182 aa17.12■□□□□ 0.33
OTUB1-211ENST00000543004 GSX1Q9H4S2 264 aaPredicted RBP17.12■□□□□ 0.33
OTUB1-211ENST00000543004 DIABLOQ9NR28 239 aa17.12■□□□□ 0.33
OTUB1-211ENST00000543004 ONECUT1Q9UBC0 465 aa17.12■□□□□ 0.33
OTUB1-211ENST00000543004 H3BUI4 141 aa17.11■□□□□ 0.33
OTUB1-211ENST00000543004 XRCC3O43542 346 aa17.11■□□□□ 0.33
OTUB1-211ENST00000543004 RCC1P18754 421 aaPredicted RBP17.11■□□□□ 0.33
OTUB1-211ENST00000543004 DVL1P1P54792 670 aaPredicted RBP17.11■□□□□ 0.33
OTUB1-211ENST00000543004 FAHD2BQ6P2I3 314 aaPredicted RBP17.11■□□□□ 0.33
OTUB1-211ENST00000543004 TRAPPC6BQ86SZ2 158 aa17.11■□□□□ 0.33
OTUB1-211ENST00000543004 GAPTQ8N292 157 aa17.11■□□□□ 0.33
OTUB1-211ENST00000543004 UBALD1Q8TB05 177 aa17.11■□□□□ 0.33
OTUB1-211ENST00000543004 FAHD2AQ96GK7 314 aa17.11■□□□□ 0.33
OTUB1-211ENST00000543004 EXTL2Q9UBQ6 330 aa17.11■□□□□ 0.33
OTUB1-211ENST00000543004 hADV38S2A0JD32 116 aa17.1■□□□□ 0.33
OTUB1-211ENST00000543004 CD5LO43866 347 aa17.1■□□□□ 0.33
OTUB1-211ENST00000543004 AVPP01185 164 aa17.1■□□□□ 0.33
OTUB1-211ENST00000543004 LIPFP07098 398 aa17.1■□□□□ 0.33
OTUB1-211ENST00000543004 GLP1RP43220 463 aa17.1■□□□□ 0.33
OTUB1-211ENST00000543004 TAS2R20P59543 309 aa17.1■□□□□ 0.33
OTUB1-211ENST00000543004 MEF2CQ06413 473 aaPredicted RBP17.1■□□□□ 0.33
OTUB1-211ENST00000543004 TMEM69Q5SWH9 247 aa17.1■□□□□ 0.33
OTUB1-211ENST00000543004 CNIH2Q6PI25 160 aa17.1■□□□□ 0.33
OTUB1-211ENST00000543004 NUDCD2Q8WVJ2 157 aa17.1■□□□□ 0.33
OTUB1-211ENST00000543004 CMSS1Q9BQ75 279 aaKnown RBP17.1■□□□□ 0.33
OTUB1-211ENST00000543004 MMP27Q9H306 513 aa17.1■□□□□ 0.33
OTUB1-211ENST00000543004 MRPS7Q9Y2R9 242 aaKnown RBP17.1■□□□□ 0.33
OTUB1-211ENST00000543004 LINC00312Q9Y6C7 94 aa17.1■□□□□ 0.33
OTUB1-211ENST00000543004 SONP18583 2426 aaKnown RBP17.1■□□□□ 0.33
OTUB1-211ENST00000543004 ANK3Q12955 4377 aaKnown RBP17.1■□□□□ 0.33
OTUB1-211ENST00000543004 A0A0A6YYH2 397 aa17.1■□□□□ 0.33
OTUB1-211ENST00000543004 FUOMA2VDF0 154 aa17.1■□□□□ 0.33
OTUB1-211ENST00000543004 A6NJ64 397 aa17.1■□□□□ 0.33
OTUB1-211ENST00000543004 SCGNO76038 276 aa17.1■□□□□ 0.33
OTUB1-211ENST00000543004 NAPSAO96009 420 aa17.1■□□□□ 0.33
OTUB1-211ENST00000543004 DLX6P56179 175 aa17.1■□□□□ 0.33
OTUB1-211ENST00000543004 C11orf91Q3C1V1 193 aa17.1■□□□□ 0.33
OTUB1-211ENST00000543004 BTNL3Q6UXE8 466 aa17.1■□□□□ 0.33
OTUB1-211ENST00000543004 Q71RC1 249 aaPredicted RBP17.1■□□□□ 0.33
OTUB1-211ENST00000543004 C11orf42Q8N5U0 333 aa17.1■□□□□ 0.33
OTUB1-211ENST00000543004 Q8N7P7 452 aa17.1■□□□□ 0.33
OTUB1-211ENST00000543004 TMPRSS13Q9BYE2 586 aa17.1■□□□□ 0.33
OTUB1-211ENST00000543004 AUNIPQ9H7T9 357 aa17.1■□□□□ 0.33
OTUB1-211ENST00000543004 CHMP1AQ9HD42 196 aaPredicted RBP17.1■□□□□ 0.33
OTUB1-211ENST00000543004 TRAPPC2LQ9UL33 140 aa17.1■□□□□ 0.33
OTUB1-211ENST00000543004 TRGV10A0A0A0MS01 117 aa17.09■□□□□ 0.33
OTUB1-211ENST00000543004 A0A0G2JMP0 313 aa17.09■□□□□ 0.33
OTUB1-211ENST00000543004 A0A0X1KG70 313 aa17.09■□□□□ 0.33
OTUB1-211ENST00000543004 MMP23AO75900 390 aa17.09■□□□□ 0.33
OTUB1-211ENST00000543004 HLA-DQB1P01920 261 aa17.09■□□□□ 0.33
OTUB1-211ENST00000543004 FOSL1P15407 271 aa17.09■□□□□ 0.33
OTUB1-211ENST00000543004 OMGP23515 440 aa17.09■□□□□ 0.33
OTUB1-211ENST00000543004 TNFSF8P32971 234 aa17.09■□□□□ 0.33
OTUB1-211ENST00000543004 SSTR5P35346 364 aa17.09■□□□□ 0.33
OTUB1-211ENST00000543004 GUCA2AQ02747 115 aa17.09■□□□□ 0.33
OTUB1-211ENST00000543004 PAX8Q06710 450 aa17.09■□□□□ 0.33
OTUB1-211ENST00000543004 ARFRP1Q13795 201 aa17.09■□□□□ 0.33
OTUB1-211ENST00000543004 HACD4Q5VWC8 232 aa17.09■□□□□ 0.33
OTUB1-211ENST00000543004 OR4M2Q8NGB6 313 aa17.09■□□□□ 0.33
OTUB1-211ENST00000543004 SETD6Q8TBK2 473 aa17.09■□□□□ 0.33
OTUB1-211ENST00000543004 C7orf69Q9H7B7 122 aa17.09■□□□□ 0.33
OTUB1-211ENST00000543004 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.09■□□□□ 0.33
OTUB1-211ENST00000543004 ZNF230Q9UIE0 474 aaPredicted RBP17.09■□□□□ 0.33
OTUB1-211ENST00000543004 SERPINE3A8MV23 424 aa17.08■□□□□ 0.32
OTUB1-211ENST00000543004 SSX5O60225 188 aa17.08■□□□□ 0.32
OTUB1-211ENST00000543004 CA11O75493 328 aa17.08■□□□□ 0.32
OTUB1-211ENST00000543004 GSTP1P09211 210 aaKnown RBP17.08■□□□□ 0.32
OTUB1-211ENST00000543004 CD3GP09693 182 aa17.08■□□□□ 0.32
OTUB1-211ENST00000543004 CGB3P0DN86 165 aa17.08■□□□□ 0.32
OTUB1-211ENST00000543004 CGB7P0DN87 165 aa17.08■□□□□ 0.32
OTUB1-211ENST00000543004 C17orf58Q2M2W7 97 aa17.08■□□□□ 0.32
OTUB1-211ENST00000543004 C1orf229Q6ZS94 237 aaPredicted RBP17.08■□□□□ 0.32
OTUB1-211ENST00000543004 MAFIPQ8WZ33 124 aa17.08■□□□□ 0.32
OTUB1-211ENST00000543004 CORO2AQ92828 525 aa17.08■□□□□ 0.32
OTUB1-211ENST00000543004 DIRAS2Q96HU8 199 aa17.08■□□□□ 0.32
OTUB1-211ENST00000543004 ZNF714Q96N38 554 aa17.08■□□□□ 0.32
OTUB1-211ENST00000543004 SIRPDQ9H106 197 aa17.08■□□□□ 0.32
OTUB1-211ENST00000543004 YAE1D1Q9NRH1 226 aa17.08■□□□□ 0.32
OTUB1-211ENST00000543004 OR6C3Q9NZP0 311 aa17.08■□□□□ 0.32
OTUB1-211ENST00000543004 A3GALT2U3KPV4 340 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms