RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 LYZL2Q7Z4W2 148 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 C1orf174Q8IYL3 243 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 S100PBPQ96BU1 408 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 PHYHIPLQ96FC7 376 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 TP53TG5Q9Y2B4 290 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 SVILO95425 2214 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 IGHV3-64DA0A0J9YX35 117 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 MFSD2BA6NFX1 497 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 SIRPB1O00241 398 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 NXPH2O95156 264 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 DIRAS3O95661 229 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 GRPP07492 148 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 HOXD4P09016 255 aaPredicted RBP11.97□□□□□ -0.49
LDB3-207ENST00000542786 ZNF44P15621 663 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 AANATQ16613 207 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 ZNF718Q3SXZ3 478 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 PAN3Q58A45 887 aaKnown RBP11.97□□□□□ -0.49
LDB3-207ENST00000542786 TOR2AQ5JU69 321 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 ZNF818PQ6ZRF7 136 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 ZNF826PQ6ZT77 177 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 MOB1BQ7L9L4 216 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 OR5T2Q8NGG2 359 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 USB1Q9BQ65 265 aaKnown RBP11.97□□□□□ -0.49
LDB3-207ENST00000542786 SYT3Q9BQG1 590 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 SCNM1Q9BWG6 230 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 GSKIPQ9P0R6 139 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 FZR1Q9UM11 496 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 PCDHB10Q9UN67 800 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 MEMO1Q9Y316 297 aa11.97□□□□□ -0.49
LDB3-207ENST00000542786 PTPRZ1P23471 2315 aaPredicted RBP11.96□□□□□ -0.49
LDB3-207ENST00000542786 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.96□□□□□ -0.49
LDB3-207ENST00000542786 hCG_1807616A0A1W2PRN6 198 aa11.96□□□□□ -0.49
LDB3-207ENST00000542786 WNT9BO14905 357 aa11.96□□□□□ -0.49
LDB3-207ENST00000542786 TIMM8AO60220 97 aaPredicted RBP11.96□□□□□ -0.49
LDB3-207ENST00000542786 PTBP3O95758 552 aaKnown RBP11.96□□□□□ -0.49
LDB3-207ENST00000542786 LMO1P25800 156 aa11.96□□□□□ -0.49
LDB3-207ENST00000542786 P2RX3P56373 397 aa11.96□□□□□ -0.49
LDB3-207ENST00000542786 NKX6-1P78426 367 aaPredicted RBP11.96□□□□□ -0.49
LDB3-207ENST00000542786 TBR1Q16650 682 aa11.96□□□□□ -0.49
LDB3-207ENST00000542786 FAM180AQ6UWF9 173 aa11.96□□□□□ -0.49
LDB3-207ENST00000542786 WDR82Q6UXN9 313 aa11.96□□□□□ -0.49
LDB3-207ENST00000542786 LGI3Q8N145 548 aa11.96□□□□□ -0.49
LDB3-207ENST00000542786 TMEM56Q96MV1 263 aa11.96□□□□□ -0.49
LDB3-207ENST00000542786 ZNF471Q9BX82 626 aaPredicted RBP11.96□□□□□ -0.49
LDB3-207ENST00000542786 SLC5A7Q9GZV3 580 aa11.96□□□□□ -0.49
LDB3-207ENST00000542786 SHARPINQ9H0F6 387 aa11.96□□□□□ -0.49
LDB3-207ENST00000542786 TMEM222Q9H0R3 208 aa11.96□□□□□ -0.49
LDB3-207ENST00000542786 SLC25A32Q9H2D1 315 aa11.96□□□□□ -0.49
LDB3-207ENST00000542786 MBNL3Q9NUK0 354 aaKnown RBP11.96□□□□□ -0.49
LDB3-207ENST00000542786 TMEM56-RWDD3S4R434 201 aa11.96□□□□□ -0.49
LDB3-207ENST00000542786 SPENQ96T58 3664 aaKnown RBP11.96□□□□□ -0.5
LDB3-207ENST00000542786 C3orf85A0A1B0GTC6 90 aa11.95□□□□□ -0.5
LDB3-207ENST00000542786 GPR31O00270 319 aa11.95□□□□□ -0.5
LDB3-207ENST00000542786 DEDDO75618 318 aa11.95□□□□□ -0.5
LDB3-207ENST00000542786 IFNA21P01568 189 aa11.95□□□□□ -0.5
LDB3-207ENST00000542786 FABP6P51161 128 aa11.95□□□□□ -0.5
LDB3-207ENST00000542786 ZNF83P51522 516 aa11.95□□□□□ -0.5
LDB3-207ENST00000542786 HOXA4Q00056 320 aaPredicted RBP11.95□□□□□ -0.5
LDB3-207ENST00000542786 PRAMEF6Q5VXH4 476 aa11.95□□□□□ -0.5
LDB3-207ENST00000542786 SPERTQ8NA61 448 aa11.95□□□□□ -0.5
LDB3-207ENST00000542786 RELL2Q8NC24 303 aaPredicted RBP11.95□□□□□ -0.5
LDB3-207ENST00000542786 BARX1Q9HBU1 254 aaPredicted RBP11.95□□□□□ -0.5
LDB3-207ENST00000542786 MSL2Q9HCI7 577 aa11.95□□□□□ -0.5
LDB3-207ENST00000542786 WIPI2Q9Y4P8 454 aa11.95□□□□□ -0.5
LDB3-207ENST00000542786 F5H0A9 414 aaPredicted RBP11.95□□□□□ -0.5
LDB3-207ENST00000542786 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.95□□□□□ -0.5
LDB3-207ENST00000542786 SH2D1BO14796 132 aa11.95□□□□□ -0.5
LDB3-207ENST00000542786 PHF1O43189 567 aaPredicted RBP11.95□□□□□ -0.5
LDB3-207ENST00000542786 HAND1O96004 215 aa11.95□□□□□ -0.5
LDB3-207ENST00000542786 MBPP02686 304 aaPredicted RBP11.95□□□□□ -0.5
LDB3-207ENST00000542786 WNT2P09544 360 aa11.95□□□□□ -0.5
LDB3-207ENST00000542786 PET100P0DJ07 73 aa11.95□□□□□ -0.5
LDB3-207ENST00000542786 HKR1P10072 659 aa11.95□□□□□ -0.5
LDB3-207ENST00000542786 ZNF250P15622 560 aa11.95□□□□□ -0.5
LDB3-207ENST00000542786 HMGN3Q15651 99 aa11.95□□□□□ -0.5
LDB3-207ENST00000542786 FAM74A1Q5RGS3 127 aa11.95□□□□□ -0.5
LDB3-207ENST00000542786 TBC1D26Q86UD7 250 aa11.95□□□□□ -0.5
LDB3-207ENST00000542786 LILRB1Q8NHL6 650 aaPredicted RBP11.95□□□□□ -0.5
LDB3-207ENST00000542786 PRR7Q8TB68 274 aa11.95□□□□□ -0.5
LDB3-207ENST00000542786 SECTM1Q8WVN6 248 aa11.95□□□□□ -0.5
LDB3-207ENST00000542786 CCL28Q9NRJ3 127 aa11.95□□□□□ -0.5
LDB3-207ENST00000542786 OR1A1Q9P1Q5 309 aa11.95□□□□□ -0.5
LDB3-207ENST00000542786 OR2W1Q9Y3N9 320 aa11.95□□□□□ -0.5
LDB3-207ENST00000542786 TRAV39A0A0B4J263 110 aa11.94□□□□□ -0.5
LDB3-207ENST00000542786 A8MXE2 369 aa11.94□□□□□ -0.5
LDB3-207ENST00000542786 K7ENP7 123 aa11.94□□□□□ -0.5
LDB3-207ENST00000542786 PSPNO60542 156 aa11.94□□□□□ -0.5
LDB3-207ENST00000542786 CCKARP32238 428 aa11.94□□□□□ -0.5
LDB3-207ENST00000542786 CEBPDP49716 269 aaPredicted RBP11.94□□□□□ -0.5
LDB3-207ENST00000542786 S100A10P60903 97 aa11.94□□□□□ -0.5
LDB3-207ENST00000542786 NHLH1Q02575 133 aa11.94□□□□□ -0.5
LDB3-207ENST00000542786 TESK1Q15569 626 aa11.94□□□□□ -0.5
LDB3-207ENST00000542786 ACP7Q6ZNF0 438 aa11.94□□□□□ -0.5
LDB3-207ENST00000542786 C22orf34Q6ZV56 151 aa11.94□□□□□ -0.5
LDB3-207ENST00000542786 LRP11Q86VZ4 500 aa11.94□□□□□ -0.5
LDB3-207ENST00000542786 DOLPP1Q86YN1 238 aa11.94□□□□□ -0.5
LDB3-207ENST00000542786 SLC35G3Q8N808 338 aa11.94□□□□□ -0.5
LDB3-207ENST00000542786 ANGPTL6Q8NI99 470 aa11.94□□□□□ -0.5
LDB3-207ENST00000542786 KIRREL1Q96J84 757 aa11.94□□□□□ -0.5
LDB3-207ENST00000542786 C11orf1Q9H5F2 150 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms