RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 C19orf12Q9NSK7 152 aa11.63□□□□□ -0.55
PTPN1-202ENST00000541713 NSG2Q9Y328 171 aa11.63□□□□□ -0.55
PTPN1-202ENST00000541713 TRBV6-7A0A0A0MS04 114 aa11.63□□□□□ -0.55
PTPN1-202ENST00000541713 MPZP25189 248 aa11.63□□□□□ -0.55
PTPN1-202ENST00000541713 RAB13P51153 203 aa11.63□□□□□ -0.55
PTPN1-202ENST00000541713 ARG2P78540 354 aa11.63□□□□□ -0.55
PTPN1-202ENST00000541713 EWSR1Q01844 656 aaKnown RBP eCLIP11.63□□□□□ -0.55
PTPN1-202ENST00000541713 PLP2Q04941 152 aa11.63□□□□□ -0.55
PTPN1-202ENST00000541713 ZFP36L1Q07352 338 aaKnown RBP11.63□□□□□ -0.55
PTPN1-202ENST00000541713 BEND4Q6ZU67 534 aa11.63□□□□□ -0.55
PTPN1-202ENST00000541713 RFESDQ8TAC1 157 aa11.63□□□□□ -0.55
PTPN1-202ENST00000541713 APH1AQ96BI3 265 aa11.63□□□□□ -0.55
PTPN1-202ENST00000541713 PRELID3BQ9Y3B1 194 aa11.63□□□□□ -0.55
PTPN1-202ENST00000541713 IGSF23A1L1A6 192 aa11.62□□□□□ -0.55
PTPN1-202ENST00000541713 C7orf77A4D0Y5 90 aa11.62□□□□□ -0.55
PTPN1-202ENST00000541713 ZFP92A6NM28 416 aa11.62□□□□□ -0.55
PTPN1-202ENST00000541713 NQO2P16083 231 aa11.62□□□□□ -0.55
PTPN1-202ENST00000541713 DYNLT3P51808 116 aa11.62□□□□□ -0.55
PTPN1-202ENST00000541713 EIF5AP63241 154 aaKnown RBP11.62□□□□□ -0.55
PTPN1-202ENST00000541713 HPSE2Q8WWQ2 592 aa11.62□□□□□ -0.55
PTPN1-202ENST00000541713 SULT1A2P50226 295 aa11.62□□□□□ -0.55
PTPN1-202ENST00000541713 ELLP55199 621 aaPredicted RBP11.62□□□□□ -0.55
PTPN1-202ENST00000541713 SHEQ5VZ18 495 aa11.62□□□□□ -0.55
PTPN1-202ENST00000541713 ZNF826PQ6ZT77 177 aa11.62□□□□□ -0.55
PTPN1-202ENST00000541713 OR2M7Q8NG81 312 aa11.62□□□□□ -0.55
PTPN1-202ENST00000541713 LUZP4Q9P127 313 aa11.62□□□□□ -0.55
PTPN1-202ENST00000541713 DEFB108AA8MXU0 73 aa11.62□□□□□ -0.55
PTPN1-202ENST00000541713 AGFG2O95081 481 aa11.62□□□□□ -0.55
PTPN1-202ENST00000541713 CTSSP25774 331 aa11.62□□□□□ -0.55
PTPN1-202ENST00000541713 ATP6V0CP27449 155 aa11.62□□□□□ -0.55
PTPN1-202ENST00000541713 ZNF343Q6P1L6 599 aa11.62□□□□□ -0.55
PTPN1-202ENST00000541713 THNSL2Q86YJ6 484 aa11.62□□□□□ -0.55
PTPN1-202ENST00000541713 OR2C3Q8N628 320 aa11.62□□□□□ -0.55
PTPN1-202ENST00000541713 TMEM251Q8N6I4 163 aa11.62□□□□□ -0.55
PTPN1-202ENST00000541713 MSI2Q96DH6 328 aaKnown RBP11.62□□□□□ -0.55
PTPN1-202ENST00000541713 TMEM100Q9NV29 134 aa11.62□□□□□ -0.55
PTPN1-202ENST00000541713 BOKQ9UMX3 212 aaPredicted RBP11.62□□□□□ -0.55
PTPN1-202ENST00000541713 ZNF724A8MTY0 619 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 C9orf172C9J069 976 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 SERPINE2P07093 398 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 PCBD1P61457 104 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 NCMAPQ5T1S8 102 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 OR8G2PQ6IF36 304 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 ZDHHC23Q8IYP9 409 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 CPNE4Q96A23 557 aaPredicted RBP11.61□□□□□ -0.55
PTPN1-202ENST00000541713 AKAP6Q13023 2319 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 CD300LBA8K4G0 201 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 CDIPTO14735 213 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 SLC34A2O95436 690 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 METTL15P1P0C7V9 234 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 PSG2P11465 335 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 DEFA4P12838 97 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 MPLP40238 635 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 IL15RAQ13261 267 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 HERPUD1Q15011 391 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 UQCC3Q6UW78 93 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 LINC00518Q8N0U6 118 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 RSG1Q9BU20 258 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 TTTY12Q9BZ98 90 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 IGHV3-43A0A0B4J1X8 118 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 A0A0G2JRQ6 117 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 LNP1A1A4G5 178 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 NTN3O00634 580 aaPredicted RBP11.61□□□□□ -0.55
PTPN1-202ENST00000541713 NEURL1O76050 574 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 TMEM50AO95807 157 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 IGLV3-1P01715 115 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 IGHV3-43DP0DP04 118 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 RPS10P46783 165 aaKnown RBP11.61□□□□□ -0.55
PTPN1-202ENST00000541713 NAAAQ02083 359 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 C4orf17Q53FE4 359 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 TMEM171Q8WVE6 324 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 USB1Q9BQ65 265 aaKnown RBP11.61□□□□□ -0.55
PTPN1-202ENST00000541713 SEC11CQ9BY50 192 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 DNAJB11Q9UBS4 358 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 TRAPPC2LQ9UL33 140 aa11.61□□□□□ -0.55
PTPN1-202ENST00000541713 ZNF98A6NK75 572 aa11.6□□□□□ -0.55
PTPN1-202ENST00000541713 H0YL77 283 aa11.6□□□□□ -0.55
PTPN1-202ENST00000541713 ARL6IP1Q15041 203 aa11.6□□□□□ -0.55
PTPN1-202ENST00000541713 BTNL8Q6UX41 500 aa11.6□□□□□ -0.55
PTPN1-202ENST00000541713 SMIM8Q96KF7 97 aa11.6□□□□□ -0.55
PTPN1-202ENST00000541713 A0A1W2PNU3 283 aaPredicted RBP11.6□□□□□ -0.55
PTPN1-202ENST00000541713 TNFSF15O95150 251 aa11.6□□□□□ -0.55
PTPN1-202ENST00000541713 FLI1Q01543 452 aaPredicted RBP11.6□□□□□ -0.55
PTPN1-202ENST00000541713 FOXO1Q12778 655 aa11.6□□□□□ -0.55
PTPN1-202ENST00000541713 SUMF2Q8NBJ7 301 aa11.6□□□□□ -0.55
PTPN1-202ENST00000541713 DMBX1Q8NFW5 382 aa11.6□□□□□ -0.55
PTPN1-202ENST00000541713 GLRX2Q9NS18 164 aa11.6□□□□□ -0.55
PTPN1-202ENST00000541713 IGKV1-6A0A0C4DH72 117 aa11.59□□□□□ -0.55
PTPN1-202ENST00000541713 SLC22A20A6NK97 555 aa11.59□□□□□ -0.55
PTPN1-202ENST00000541713 KIAA1324LA8MWY0 1029 aaPredicted RBP11.59□□□□□ -0.55
PTPN1-202ENST00000541713 SERPINA7P05543 415 aa11.59□□□□□ -0.55
PTPN1-202ENST00000541713 FKBP2P26885 142 aaKnown RBP11.59□□□□□ -0.55
PTPN1-202ENST00000541713 DVL1P1P54792 670 aaPredicted RBP11.59□□□□□ -0.55
PTPN1-202ENST00000541713 HIST1H3AP68431 136 aa11.59□□□□□ -0.55
PTPN1-202ENST00000541713 SOHLH1Q5JUK2 328 aa11.59□□□□□ -0.55
PTPN1-202ENST00000541713 HIST2H3PS2Q5TEC6 136 aa11.59□□□□□ -0.55
PTPN1-202ENST00000541713 IL34Q6ZMJ4 242 aa11.59□□□□□ -0.55
PTPN1-202ENST00000541713 HIST2H3AQ71DI3 136 aa11.59□□□□□ -0.55
PTPN1-202ENST00000541713 CCDC71LQ8N9Z2 235 aa11.59□□□□□ -0.55
PTPN1-202ENST00000541713 GNG13Q9P2W3 67 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms