RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 OR11L1Q8NGX0 322 aa23.23■■□□□ 1.31
CCM2-218ENST00000541586 MRPL30Q8TCC3 161 aaKnown RBP23.23■■□□□ 1.31
CCM2-218ENST00000541586 BEX2Q9BXY8 128 aa23.23■■□□□ 1.31
CCM2-218ENST00000541586 BEX1Q9HBH7 125 aa23.23■■□□□ 1.31
CCM2-218ENST00000541586 Q9N2K0 584 aa23.23■■□□□ 1.31
CCM2-218ENST00000541586 CYB5R3P00387 301 aaPredicted RBP23.22■■□□□ 1.31
CCM2-218ENST00000541586 TSPAN5P62079 268 aa23.22■■□□□ 1.31
CCM2-218ENST00000541586 PLPPR1Q8TBJ4 325 aa23.22■■□□□ 1.31
CCM2-218ENST00000541586 GIMAP1Q8WWP7 306 aa23.22■■□□□ 1.31
CCM2-218ENST00000541586 CCL17Q92583 94 aa23.22■■□□□ 1.31
CCM2-218ENST00000541586 MRGPRFQ96AM1 343 aa23.22■■□□□ 1.31
CCM2-218ENST00000541586 MBD6Q96DN6 1003 aa23.22■■□□□ 1.31
CCM2-218ENST00000541586 IGHV3OR15-7A0A075B7D8 119 aa23.22■■□□□ 1.31
CCM2-218ENST00000541586 OR2AT4A6NND4 320 aa23.22■■□□□ 1.31
CCM2-218ENST00000541586 SRSF7Q16629 238 aaKnown RBP eCLIP23.22■■□□□ 1.31
CCM2-218ENST00000541586 FAM201AQ5SY85 155 aa23.22■■□□□ 1.31
CCM2-218ENST00000541586 Q6ZS49 121 aa23.22■■□□□ 1.31
CCM2-218ENST00000541586 CD177Q8N6Q3 437 aa23.22■■□□□ 1.31
CCM2-218ENST00000541586 NEURL2Q9BR09 285 aa23.22■■□□□ 1.31
CCM2-218ENST00000541586 METRNQ9UJH8 293 aa23.22■■□□□ 1.31
CCM2-218ENST00000541586 IGKV1D-17A0A075B6S4 117 aa23.21■■□□□ 1.31
CCM2-218ENST00000541586 TRBV6-6A0A0A6YYG2 114 aa23.21■■□□□ 1.31
CCM2-218ENST00000541586 A0A0A6YYJ9 748 aa23.21■■□□□ 1.31
CCM2-218ENST00000541586 IGHV1-69-2A0A0G2JMI3 117 aa23.21■■□□□ 1.31
CCM2-218ENST00000541586 PAX1P15863 534 aa23.21■■□□□ 1.31
CCM2-218ENST00000541586 ANXA7P20073 488 aaKnown RBP23.21■■□□□ 1.31
CCM2-218ENST00000541586 PRDX2P32119 198 aa23.21■■□□□ 1.31
CCM2-218ENST00000541586 CD80P33681 288 aa23.21■■□□□ 1.31
CCM2-218ENST00000541586 COL10A1Q03692 680 aa23.21■■□□□ 1.31
CCM2-218ENST00000541586 ATXN7L3Q14CW9 347 aaPredicted RBP23.21■■□□□ 1.31
CCM2-218ENST00000541586 ING3Q9NXR8 418 aa23.21■■□□□ 1.31
CCM2-218ENST00000541586 ITGB1BP2Q9UKP3 347 aa23.21■■□□□ 1.31
CCM2-218ENST00000541586 PDZD2O15018 2839 aa23.21■■□□□ 1.31
CCM2-218ENST00000541586 C7orf66A4D0T2 115 aa23.2■■□□□ 1.3
CCM2-218ENST00000541586 RLN1P04808 185 aa23.2■■□□□ 1.3
CCM2-218ENST00000541586 IRF2P14316 349 aa23.2■■□□□ 1.3
CCM2-218ENST00000541586 MECP2P51608 486 aaKnown RBP23.2■■□□□ 1.3
CCM2-218ENST00000541586 ZNF497Q6ZNH5 498 aa23.2■■□□□ 1.3
CCM2-218ENST00000541586 TMEM17Q86X19 198 aa23.2■■□□□ 1.3
CCM2-218ENST00000541586 ZNF525Q8N782 197 aa23.2■■□□□ 1.3
CCM2-218ENST00000541586 TERB2Q8NHR7 220 aa23.2■■□□□ 1.3
CCM2-218ENST00000541586 CHAC2Q8WUX2 184 aa23.2■■□□□ 1.3
CCM2-218ENST00000541586 BARX1Q9HBU1 254 aaPredicted RBP23.2■■□□□ 1.3
CCM2-218ENST00000541586 NECAP2Q9NVZ3 263 aa23.2■■□□□ 1.3
CCM2-218ENST00000541586 DCAF16Q9NXF7 216 aa23.2■■□□□ 1.3
CCM2-218ENST00000541586 DYSFO75923 2080 aa23.19■■□□□ 1.3
CCM2-218ENST00000541586 GSTT2P0CG29 244 aa23.19■■□□□ 1.3
CCM2-218ENST00000541586 GRK1Q15835 563 aa23.19■■□□□ 1.3
CCM2-218ENST00000541586 HPS1Q92902 700 aa23.19■■□□□ 1.3
CCM2-218ENST00000541586 GHITMQ9H3K2 345 aa23.19■■□□□ 1.3
CCM2-218ENST00000541586 SEBOXQ9HB31 216 aaPredicted RBP23.19■■□□□ 1.3
CCM2-218ENST00000541586 TMEM82A0PJX8 343 aa23.19■■□□□ 1.3
CCM2-218ENST00000541586 ZNF880Q6PDB4 577 aa23.19■■□□□ 1.3
CCM2-218ENST00000541586 C17orf107Q6ZR85 190 aa23.19■■□□□ 1.3
CCM2-218ENST00000541586 GAPTQ8N292 157 aa23.19■■□□□ 1.3
CCM2-218ENST00000541586 LRRC30A6NM36 301 aa23.18■■□□□ 1.3
CCM2-218ENST00000541586 PRAF2O60831 178 aa23.18■■□□□ 1.3
CCM2-218ENST00000541586 ZNF205O95201 554 aa23.18■■□□□ 1.3
CCM2-218ENST00000541586 OR5H8P0DN80 308 aa23.18■■□□□ 1.3
CCM2-218ENST00000541586 HFEQ30201 348 aa23.18■■□□□ 1.3
CCM2-218ENST00000541586 ATPAF1Q5TC12 328 aaPredicted RBP23.18■■□□□ 1.3
CCM2-218ENST00000541586 LHFPL1Q86WI0 220 aa23.18■■□□□ 1.3
CCM2-218ENST00000541586 VSIG4Q9Y279 399 aa23.18■■□□□ 1.3
CCM2-218ENST00000541586 SETXQ7Z333 2677 aaKnown RBP23.18■■□□□ 1.3
CCM2-218ENST00000541586 H7C1Q1 480 aa23.17■■□□□ 1.3
CCM2-218ENST00000541586 OR3A1P47881 315 aa23.17■■□□□ 1.3
CCM2-218ENST00000541586 LRRC75A-AS1Q8N1F1 130 aa23.17■■□□□ 1.3
CCM2-218ENST00000541586 ASCC1Q8N9N2 400 aaKnown RBP23.17■■□□□ 1.3
CCM2-218ENST00000541586 ZNF222Q9UK12 451 aa23.17■■□□□ 1.3
CCM2-218ENST00000541586 RCC1P18754 421 aaPredicted RBP23.16■■□□□ 1.3
CCM2-218ENST00000541586 GABRA2P47869 451 aa23.16■■□□□ 1.3
CCM2-218ENST00000541586 C5orf24Q7Z6I8 188 aa23.16■■□□□ 1.3
CCM2-218ENST00000541586 ANGPTL6Q8NI99 470 aa23.16■■□□□ 1.3
CCM2-218ENST00000541586 SHARPINQ9H0F6 387 aa23.16■■□□□ 1.3
CCM2-218ENST00000541586 KIR2DS1A0A191URI9 304 aa23.16■■□□□ 1.3
CCM2-218ENST00000541586 POM121CA8CG34 1229 aa23.16■■□□□ 1.3
CCM2-218ENST00000541586 TRDCB7Z8K6 153 aa23.16■■□□□ 1.3
CCM2-218ENST00000541586 VSIG10L2P0DP72 767 aa23.16■■□□□ 1.3
CCM2-218ENST00000541586 KIR2DS4P43632 304 aa23.16■■□□□ 1.3
CCM2-218ENST00000541586 NPY4RP50391 375 aa23.16■■□□□ 1.3
CCM2-218ENST00000541586 CBX3Q13185 183 aa23.16■■□□□ 1.3
CCM2-218ENST00000541586 KIR2DS1Q14954 304 aa23.16■■□□□ 1.3
CCM2-218ENST00000541586 AADACL3Q5VUY0 350 aa23.16■■□□□ 1.3
CCM2-218ENST00000541586 GLDNQ6ZMI3 551 aaPredicted RBP23.16■■□□□ 1.3
CCM2-218ENST00000541586 SLC36A1Q7Z2H8 476 aa23.16■■□□□ 1.3
CCM2-218ENST00000541586 ZDHHC22Q8N966 263 aa23.16■■□□□ 1.3
CCM2-218ENST00000541586 OR6F1Q8NGZ6 308 aa23.16■■□□□ 1.3
CCM2-218ENST00000541586 CCDC107Q8WV48 283 aa23.16■■□□□ 1.3
CCM2-218ENST00000541586 DACT3Q96B18 629 aaPredicted RBP23.16■■□□□ 1.3
CCM2-218ENST00000541586 HMX3A6NHT5 357 aa23.15■■□□□ 1.3
CCM2-218ENST00000541586 FABP7O15540 132 aa23.15■■□□□ 1.3
CCM2-218ENST00000541586 ZNF737O75373 536 aa23.15■■□□□ 1.3
CCM2-218ENST00000541586 SCTP09683 121 aa23.15■■□□□ 1.3
CCM2-218ENST00000541586 KCNJ3P48549 501 aa23.15■■□□□ 1.3
CCM2-218ENST00000541586 IGSF11Q5DX21 431 aa23.15■■□□□ 1.3
CCM2-218ENST00000541586 ZNF660Q6AZW8 331 aaPredicted RBP23.15■■□□□ 1.3
CCM2-218ENST00000541586 TMED4Q7Z7H5 227 aa23.15■■□□□ 1.3
CCM2-218ENST00000541586 MARCH1Q8TCQ1 289 aa23.15■■□□□ 1.3
CCM2-218ENST00000541586 SEC22CQ9BRL7 303 aa23.15■■□□□ 1.3
CCM2-218ENST00000541586 ZNF2Q9BSG1 426 aaPredicted RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms