RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 LRRC25Q8N386 305 aaPredicted RBP5.38□□□□□ -1.55
LMO3-225ENST00000541295 STAG3L4Q8TBR4 150 aa5.38□□□□□ -1.55
LMO3-225ENST00000541295 PNPLA2Q96AD5 504 aa5.38□□□□□ -1.55
LMO3-225ENST00000541295 SARAFQ96BY9 339 aa5.38□□□□□ -1.55
LMO3-225ENST00000541295 SLAMF6Q96DU3 332 aa5.38□□□□□ -1.55
LMO3-225ENST00000541295 IP6K3Q96PC2 410 aa5.38□□□□□ -1.55
LMO3-225ENST00000541295 CDX2Q99626 313 aaPredicted RBP5.38□□□□□ -1.55
LMO3-225ENST00000541295 SPATA25Q9BR10 227 aa5.38□□□□□ -1.55
LMO3-225ENST00000541295 ELL3Q9HB65 397 aaPredicted RBP5.38□□□□□ -1.55
LMO3-225ENST00000541295 CLEC1BQ9P126 229 aa5.38□□□□□ -1.55
LMO3-225ENST00000541295 AK3Q9UIJ7 227 aa5.38□□□□□ -1.55
LMO3-225ENST00000541295 SIGLEC7Q9Y286 467 aa5.38□□□□□ -1.55
LMO3-225ENST00000541295 SOX21Q9Y651 276 aaPredicted RBP5.38□□□□□ -1.55
LMO3-225ENST00000541295 UNC80Q8N2C7 3258 aa5.38□□□□□ -1.55
LMO3-225ENST00000541295 A0A087WX48 190 aa5.38□□□□□ -1.55
LMO3-225ENST00000541295 ZNF670-ZNF695F2Z2N8 137 aa5.38□□□□□ -1.55
LMO3-225ENST00000541295 GEMIN2O14893 280 aaKnown RBP5.38□□□□□ -1.55
LMO3-225ENST00000541295 OR2A4O95047 310 aa5.38□□□□□ -1.55
LMO3-225ENST00000541295 GAPDHP04406 335 aaKnown RBP5.38□□□□□ -1.55
LMO3-225ENST00000541295 ATF1P18846 271 aa5.38□□□□□ -1.55
LMO3-225ENST00000541295 SLC6A9P48067 706 aa5.38□□□□□ -1.55
LMO3-225ENST00000541295 CSRP3P50461 194 aa5.38□□□□□ -1.55
LMO3-225ENST00000541295 ADIRFQ15847 76 aa5.38□□□□□ -1.55
LMO3-225ENST00000541295 TP53I3Q53FA7 332 aa5.38□□□□□ -1.55
LMO3-225ENST00000541295 OR5A1Q8NGJ0 315 aa5.38□□□□□ -1.55
LMO3-225ENST00000541295 OR51A4Q8NGJ6 313 aa5.38□□□□□ -1.55
LMO3-225ENST00000541295 NEU4Q8WWR8 484 aaPredicted RBP5.38□□□□□ -1.55
LMO3-225ENST00000541295 FRZBQ92765 325 aa5.38□□□□□ -1.55
LMO3-225ENST00000541295 APOBEC3DQ96AK3 386 aaPredicted RBP5.38□□□□□ -1.55
LMO3-225ENST00000541295 OR2A7Q96R45 310 aa5.38□□□□□ -1.55
LMO3-225ENST00000541295 SERTAD4Q9NUC0 356 aa5.38□□□□□ -1.55
LMO3-225ENST00000541295 MRPS18AQ9NVS2 196 aaKnown RBP5.38□□□□□ -1.55
LMO3-225ENST00000541295 KLHL13Q9P2N7 655 aa5.38□□□□□ -1.55
LMO3-225ENST00000541295 IL36AQ9UHA7 158 aa5.38□□□□□ -1.55
LMO3-225ENST00000541295 HELZP42694 1942 aaKnown RBP5.37□□□□□ -1.55
LMO3-225ENST00000541295 FEZF1A0PJY2 475 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 C7orf71A4D174 169 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 MBD3L4A6NDZ8 208 aaPredicted RBP5.37□□□□□ -1.55
LMO3-225ENST00000541295 MBD3L3A6NE82 208 aaPredicted RBP5.37□□□□□ -1.55
LMO3-225ENST00000541295 MBD3L5A6NJ08 208 aaPredicted RBP5.37□□□□□ -1.55
LMO3-225ENST00000541295 IDSB3KWA1 339 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 UMAD1C9J7I0 102 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 M0R1X1 148 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 PLPP1O14494 284 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 GAPDHSO14556 408 aaPredicted RBP5.37□□□□□ -1.55
LMO3-225ENST00000541295 NKX2-2O95096 273 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 KLK1P06870 262 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 SPINK8P0C7L1 97 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 IDSP22304 550 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 ACRV1P26436 265 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 RPL3P39023 403 aaKnown RBP5.37□□□□□ -1.55
LMO3-225ENST00000541295 GDF5P43026 501 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 ZNF83P51522 516 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 MANFP55145 182 aaKnown RBP5.37□□□□□ -1.55
LMO3-225ENST00000541295 ID3Q02535 119 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 C3AR1Q16581 482 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 TDRG1Q3Y452 100 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 ZNF678Q5SXM1 525 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 IL17RELQ6ZVW7 336 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 HSD11B1LQ7Z5J1 315 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 ABHD6Q9BV23 337 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 SPANXB1Q9NS25 103 aaPredicted RBP5.37□□□□□ -1.55
LMO3-225ENST00000541295 MBNL3Q9NUK0 354 aaKnown RBP5.37□□□□□ -1.55
LMO3-225ENST00000541295 TRIOBPQ9H2D6 2365 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 TRAV36DV7A0A075B6V5 113 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 ODAMA1E959 279 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 FOXI3A8MTJ6 420 aaPredicted RBP5.37□□□□□ -1.55
LMO3-225ENST00000541295 VIPP01282 170 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 CD33P20138 364 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 POLR2LP62875 67 aaKnown RBP5.37□□□□□ -1.55
LMO3-225ENST00000541295 GNG5P63218 68 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 COA6Q5JTJ3 125 aaKnown RBP5.37□□□□□ -1.55
LMO3-225ENST00000541295 LY6G6FQ5SQ64 297 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 GLIPR1L1Q6UWM5 242 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 IL22RA1Q8N6P7 574 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 NEIL3Q8TAT5 605 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 PP6455Q8WZ26 134 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 SLC25A46Q96AG3 418 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 LIN37Q96GY3 246 aaPredicted RBP5.37□□□□□ -1.55
LMO3-225ENST00000541295 DPY30Q9C005 99 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 DNAJC27Q9NZQ0 273 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 HDGFL3Q9Y3E1 203 aa5.37□□□□□ -1.55
LMO3-225ENST00000541295 GOLGA4Q13439 2230 aaKnown RBP5.37□□□□□ -1.55
LMO3-225ENST00000541295 A0A1W2PRD5 423 aa5.36□□□□□ -1.55
LMO3-225ENST00000541295 SNRPGP15A8MWD9 76 aa5.36□□□□□ -1.55
LMO3-225ENST00000541295 F2RL2O00254 374 aa5.36□□□□□ -1.55
LMO3-225ENST00000541295 ZNF195O14628 629 aa5.36□□□□□ -1.55
LMO3-225ENST00000541295 FCGR3BO75015 233 aa5.36□□□□□ -1.55
LMO3-225ENST00000541295 REM1O75628 298 aa5.36□□□□□ -1.55
LMO3-225ENST00000541295 P04436 131 aa5.36□□□□□ -1.55
LMO3-225ENST00000541295 IGLC1P0CG04 106 aa5.36□□□□□ -1.55
LMO3-225ENST00000541295 PRTN3P24158 256 aa5.36□□□□□ -1.55
LMO3-225ENST00000541295 KIR2DL2P43627 348 aaPredicted RBP5.36□□□□□ -1.55
LMO3-225ENST00000541295 P2RY1P47900 373 aa5.36□□□□□ -1.55
LMO3-225ENST00000541295 FOXG1P55316 489 aaPredicted RBP5.36□□□□□ -1.55
LMO3-225ENST00000541295 FOXA1P55317 472 aa5.36□□□□□ -1.55
LMO3-225ENST00000541295 YBX1P67809 324 aaKnown RBP5.36□□□□□ -1.55
LMO3-225ENST00000541295 FOXL1Q12952 345 aa5.36□□□□□ -1.55
LMO3-225ENST00000541295 ADAMTSL5Q6ZMM2 481 aa5.36□□□□□ -1.55
LMO3-225ENST00000541295 C20orf196Q8IYI0 205 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms