RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 MEIS3P1A6NDR6 274 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 CYSRT1A8MQ03 144 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 MGST3O14880 152 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 PHF1O43189 567 aaPredicted RBP7.73□□□□□ -1.17
DDX55-208ENST00000541259 MT-ND4P03905 459 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 GLAP06280 429 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 FCER2P06734 321 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 MELTFP08582 738 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 GSTP1P09211 210 aaKnown RBP7.73□□□□□ -1.17
DDX55-208ENST00000541259 INHBBP09529 407 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 SLC25A16P16260 332 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 ZFP36P26651 326 aaKnown RBP7.73□□□□□ -1.17
DDX55-208ENST00000541259 ETV6P41212 452 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 MNDAP41218 407 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 DGCR2P98153 550 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 ARFRP1Q13795 201 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 RBM39Q14498 530 aaKnown RBP7.73□□□□□ -1.17
DDX55-208ENST00000541259 PNLIPRP3Q17RR3 467 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 LRRC10Q5BKY1 277 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 KRBOX4Q5JUW0 171 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 SPANXN2Q5MJ10 180 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 HACD4Q5VWC8 232 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 SHEQ5VZ18 495 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 WDR25Q64LD2 544 aaPredicted RBP7.73□□□□□ -1.17
DDX55-208ENST00000541259 ZNF497Q6ZNH5 498 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 LINC00299Q6ZSB3 139 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 MAPK1IP1LQ8NDC0 245 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 OR8B3Q8NGG8 313 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 OR5D13Q8NGL4 314 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 OR4K15Q8NH41 348 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 MRPL30Q8TCC3 161 aaKnown RBP7.73□□□□□ -1.17
DDX55-208ENST00000541259 CCDC107Q8WV48 283 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 MAFIPQ8WZ33 124 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 OR8B2Q96RD0 313 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 SDHCQ99643 169 aaPredicted RBP7.73□□□□□ -1.17
DDX55-208ENST00000541259 CMSS1Q9BQ75 279 aaKnown RBP7.73□□□□□ -1.17
DDX55-208ENST00000541259 FAM234AQ9H0X4 552 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 C19orf12Q9NSK7 152 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 ZNF230Q9UIE0 474 aaPredicted RBP7.73□□□□□ -1.17
DDX55-208ENST00000541259 KIF25Q9UIL4 384 aa7.73□□□□□ -1.17
DDX55-208ENST00000541259 ABCA1O95477 2261 aa7.72□□□□□ -1.17
DDX55-208ENST00000541259 SERPINE3A8MV23 424 aa7.72□□□□□ -1.17
DDX55-208ENST00000541259 FAM157AC9JC47 383 aa7.72□□□□□ -1.17
DDX55-208ENST00000541259 H3BUI4 141 aa7.72□□□□□ -1.17
DDX55-208ENST00000541259 NAPSAO96009 420 aa7.72□□□□□ -1.17
DDX55-208ENST00000541259 CSN2P05814 226 aa7.72□□□□□ -1.17
DDX55-208ENST00000541259 CD3GP09693 182 aa7.72□□□□□ -1.17
DDX55-208ENST00000541259 USF1P22415 310 aaPredicted RBP7.72□□□□□ -1.17
DDX55-208ENST00000541259 PRSS3P35030 304 aa7.72□□□□□ -1.17
DDX55-208ENST00000541259 EDDM3BP56851 147 aa7.72□□□□□ -1.17
DDX55-208ENST00000541259 GNG2P59768 71 aa7.72□□□□□ -1.17
DDX55-208ENST00000541259 PYDC2Q56P42 97 aa7.72□□□□□ -1.17
DDX55-208ENST00000541259 SLC35E4Q6ICL7 350 aa7.72□□□□□ -1.17
DDX55-208ENST00000541259 PYHIN1Q6K0P9 492 aa7.72□□□□□ -1.17
DDX55-208ENST00000541259 BAIAP2L2Q6UXY1 529 aa7.72□□□□□ -1.17
DDX55-208ENST00000541259 BTN2A1Q7KYR7 527 aa7.72□□□□□ -1.17
DDX55-208ENST00000541259 GDPD3Q7L5L3 318 aa7.72□□□□□ -1.17
DDX55-208ENST00000541259 NLRC3Q7RTR2 1065 aa7.72□□□□□ -1.17
DDX55-208ENST00000541259 TRAPPC6BQ86SZ2 158 aa7.72□□□□□ -1.17
DDX55-208ENST00000541259 GAPTQ8N292 157 aa7.72□□□□□ -1.17
DDX55-208ENST00000541259 GVQW1Q8N7I0 195 aa7.72□□□□□ -1.17
DDX55-208ENST00000541259 OR52I2Q8NH67 350 aa7.72□□□□□ -1.17
DDX55-208ENST00000541259 PPP1R35Q8TAP8 253 aa7.72□□□□□ -1.17
DDX55-208ENST00000541259 H1FXQ92522 213 aaKnown RBP7.72□□□□□ -1.17
DDX55-208ENST00000541259 REG4Q9BYZ8 158 aa7.72□□□□□ -1.17
DDX55-208ENST00000541259 SRRQ9GZT4 340 aa7.72□□□□□ -1.17
DDX55-208ENST00000541259 CLN8Q9UBY8 286 aa7.72□□□□□ -1.17
DDX55-208ENST00000541259 ZANQ9Y493 2812 aa7.71□□□□□ -1.17
DDX55-208ENST00000541259 FLNAP21333 2647 aaKnown RBP7.71□□□□□ -1.17
DDX55-208ENST00000541259 IGKV1D-8A0A087WSZ0 117 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 MEIKINA0A087WXM9 373 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 TMEM30CPA0ZSE6 113 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 ODAMA1E959 279 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 KIAA1324LA8MWY0 1029 aaPredicted RBP7.71□□□□□ -1.18
DDX55-208ENST00000541259 C22orf46C9J442 243 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 J3QRK9 145 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 CTDSPLO15194 276 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 LANCL1O43813 399 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 CA11O75493 328 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 TPPPO94811 219 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 FCGR3AP08637 254 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 RCC1P18754 421 aaPredicted RBP7.71□□□□□ -1.18
DDX55-208ENST00000541259 PTBP1P26599 531 aaKnown RBP eCLIP7.71□□□□□ -1.18
DDX55-208ENST00000541259 ERP29P30040 261 aaKnown RBP7.71□□□□□ -1.18
DDX55-208ENST00000541259 KCNJ3P48549 501 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 P2RX3P56373 397 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 GNB2P62879 340 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 LCN2P80188 198 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 PITPNAQ00169 270 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 ZNF45Q02386 682 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 ARL6IP1Q15041 203 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 ESCO2Q56NI9 601 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 TMEM200BQ69YZ2 307 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 ZNF880Q6PDB4 577 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 TCF23Q7RTU1 214 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 CIARTQ8N365 385 aaPredicted RBP7.71□□□□□ -1.18
DDX55-208ENST00000541259 OR13A1Q8NGR1 328 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 UBALD1Q8TB05 177 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 SETD6Q8TBK2 473 aa7.71□□□□□ -1.18
DDX55-208ENST00000541259 GPX8Q8TED1 209 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms