RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 LINC00574Q9H8X3 128 aa15.4■□□□□ 0.06
VPS33A-205ENST00000541169 PLEKHJ1Q9NW61 149 aa15.4■□□□□ 0.06
VPS33A-205ENST00000541169 ETAA1Q9NY74 926 aa15.4■□□□□ 0.06
VPS33A-205ENST00000541169 ABRACLQ9P1F3 81 aa15.4■□□□□ 0.06
VPS33A-205ENST00000541169 KIF25Q9UIL4 384 aa15.4■□□□□ 0.06
VPS33A-205ENST00000541169 CENPVL3A0A0U1RRI6 287 aa15.39■□□□□ 0.05
VPS33A-205ENST00000541169 TMEM272A0A1B0GTI8 110 aa15.39■□□□□ 0.05
VPS33A-205ENST00000541169 KBTBD11-OT1A0A1B0GTJ5 212 aa15.39■□□□□ 0.05
VPS33A-205ENST00000541169 CLPXO76031 633 aa15.39■□□□□ 0.05
VPS33A-205ENST00000541169 MXD1Q05195 221 aa15.39■□□□□ 0.05
VPS33A-205ENST00000541169 MIDNQ504T8 468 aa15.39■□□□□ 0.05
VPS33A-205ENST00000541169 SIGIRRQ6IA17 410 aa15.39■□□□□ 0.05
VPS33A-205ENST00000541169 OR10K2Q6IF99 312 aa15.39■□□□□ 0.05
VPS33A-205ENST00000541169 RBMS3Q6XE24 437 aaKnown RBP15.39■□□□□ 0.05
VPS33A-205ENST00000541169 C11orf42Q8N5U0 333 aa15.39■□□□□ 0.05
VPS33A-205ENST00000541169 TPRX1Q8N7U7 411 aa15.39■□□□□ 0.05
VPS33A-205ENST00000541169 LHX4Q969G2 390 aa15.39■□□□□ 0.05
VPS33A-205ENST00000541169 KCTD12Q96CX2 325 aaKnown RBP15.39■□□□□ 0.05
VPS33A-205ENST00000541169 NIPBLQ6KC79 2804 aaeCLIP15.38■□□□□ 0.05
VPS33A-205ENST00000541169 ORC5O43913 435 aa15.38■□□□□ 0.05
VPS33A-205ENST00000541169 MT-ND4P03905 459 aa15.38■□□□□ 0.05
VPS33A-205ENST00000541169 IGHV1-8P0DP01 117 aa15.38■□□□□ 0.05
VPS33A-205ENST00000541169 CCL3L1P16619 93 aa15.38■□□□□ 0.05
VPS33A-205ENST00000541169 HOXB4P17483 251 aaPredicted RBP15.38■□□□□ 0.05
VPS33A-205ENST00000541169 TMBIM6P55061 237 aa15.38■□□□□ 0.05
VPS33A-205ENST00000541169 DYNC1I2Q13409 638 aaKnown RBP15.38■□□□□ 0.05
VPS33A-205ENST00000541169 C6orf183Q5T699 404 aa15.38■□□□□ 0.05
VPS33A-205ENST00000541169 SLC16A12Q6ZSM3 486 aa15.38■□□□□ 0.05
VPS33A-205ENST00000541169 TCF23Q7RTU1 214 aa15.38■□□□□ 0.05
VPS33A-205ENST00000541169 RTN4RL2Q86UN3 420 aa15.38■□□□□ 0.05
VPS33A-205ENST00000541169 PLPPR1Q8TBJ4 325 aa15.38■□□□□ 0.05
VPS33A-205ENST00000541169 RAB2BQ8WUD1 216 aa15.38■□□□□ 0.05
VPS33A-205ENST00000541169 TNFRSF14Q92956 283 aa15.38■□□□□ 0.05
VPS33A-205ENST00000541169 RNF167Q9H6Y7 350 aa15.38■□□□□ 0.05
VPS33A-205ENST00000541169 SIRT7Q9NRC8 400 aa15.38■□□□□ 0.05
VPS33A-205ENST00000541169 MGAT4AQ9UM21 535 aa15.38■□□□□ 0.05
VPS33A-205ENST00000541169 SESN1Q9Y6P5 492 aa15.38■□□□□ 0.05
VPS33A-205ENST00000541169 NOL3O60936 208 aaKnown RBP15.37■□□□□ 0.05
VPS33A-205ENST00000541169 CGB3P0DN86 165 aa15.37■□□□□ 0.05
VPS33A-205ENST00000541169 CGB7P0DN87 165 aa15.37■□□□□ 0.05
VPS33A-205ENST00000541169 IGHV4-38-2P0DP08 117 aa15.37■□□□□ 0.05
VPS33A-205ENST00000541169 LSM3P62310 102 aaKnown RBP15.37■□□□□ 0.05
VPS33A-205ENST00000541169 NKAPLQ5M9Q1 402 aa15.37■□□□□ 0.05
VPS33A-205ENST00000541169 IDNKQ5T6J7 187 aa15.37■□□□□ 0.05
VPS33A-205ENST00000541169 GPR107Q5VW38 600 aa15.37■□□□□ 0.05
VPS33A-205ENST00000541169 Q6ZTK2 550 aa15.37■□□□□ 0.05
VPS33A-205ENST00000541169 SLC25A46Q96AG3 418 aa15.37■□□□□ 0.05
VPS33A-205ENST00000541169 PHF21AQ96BD5 680 aa15.37■□□□□ 0.05
VPS33A-205ENST00000541169 KCNIP1Q9NZI2 227 aa15.37■□□□□ 0.05
VPS33A-205ENST00000541169 TRAPPC2LQ9UL33 140 aa15.37■□□□□ 0.05
VPS33A-205ENST00000541169 A0A0A6YYH2 397 aa15.36■□□□□ 0.05
VPS33A-205ENST00000541169 A6NJ64 397 aa15.36■□□□□ 0.05
VPS33A-205ENST00000541169 SERPINE3A8MV23 424 aa15.36■□□□□ 0.05
VPS33A-205ENST00000541169 RNASEK-C17orf49H0YIS7 233 aa15.36■□□□□ 0.05
VPS33A-205ENST00000541169 SLC2A2P11168 524 aaPredicted RBP15.36■□□□□ 0.05
VPS33A-205ENST00000541169 RPS19P39019 145 aaKnown RBP15.36■□□□□ 0.05
VPS33A-205ENST00000541169 GLP1RP43220 463 aa15.36■□□□□ 0.05
VPS33A-205ENST00000541169 VEGFCP49767 419 aa15.36■□□□□ 0.05
VPS33A-205ENST00000541169 CTF1Q16619 201 aa15.36■□□□□ 0.05
VPS33A-205ENST00000541169 TUSC1Q2TAM9 212 aa15.36■□□□□ 0.05
VPS33A-205ENST00000541169 MOB1BQ7L9L4 216 aa15.36■□□□□ 0.05
VPS33A-205ENST00000541169 OR11H6Q8NGC7 330 aa15.36■□□□□ 0.05
VPS33A-205ENST00000541169 ACOT12Q8WYK0 555 aa15.36■□□□□ 0.05
VPS33A-205ENST00000541169 CREB3L1Q96BA8 519 aa15.36■□□□□ 0.05
VPS33A-205ENST00000541169 RAB3CQ96E17 227 aa15.36■□□□□ 0.05
VPS33A-205ENST00000541169 NICN1Q9BSH3 213 aa15.36■□□□□ 0.05
VPS33A-205ENST00000541169 OCEL1Q9H607 264 aa15.36■□□□□ 0.05
VPS33A-205ENST00000541169 SPATA2Q9UM82 520 aa15.36■□□□□ 0.05
VPS33A-205ENST00000541169 A0A087X0M5 115 aa15.35■□□□□ 0.05
VPS33A-205ENST00000541169 A0A1B0GX30 115 aa15.35■□□□□ 0.05
VPS33A-205ENST00000541169 NPIPB11E5RHQ5 1161 aa15.35■□□□□ 0.05
VPS33A-205ENST00000541169 NPFFO15130 113 aa15.35■□□□□ 0.05
VPS33A-205ENST00000541169 SPINT2O43291 252 aa15.35■□□□□ 0.05
VPS33A-205ENST00000541169 TCF21O43680 179 aa15.35■□□□□ 0.05
VPS33A-205ENST00000541169 CDK2P24941 298 aa15.35■□□□□ 0.05
VPS33A-205ENST00000541169 SERPINB10P48595 397 aa15.35■□□□□ 0.05
VPS33A-205ENST00000541169 RORCP51449 518 aa15.35■□□□□ 0.05
VPS33A-205ENST00000541169 LGALS4P56470 323 aa15.35■□□□□ 0.05
VPS33A-205ENST00000541169 VBP1P61758 197 aa15.35■□□□□ 0.05
VPS33A-205ENST00000541169 MRPS15P82914 257 aaKnown RBP15.35■□□□□ 0.05
VPS33A-205ENST00000541169 BRICD5Q6PL45 260 aa15.35■□□□□ 0.05
VPS33A-205ENST00000541169 C6orf201Q7Z4U5 140 aa15.35■□□□□ 0.05
VPS33A-205ENST00000541169 OR52M1Q8NGK5 317 aa15.35■□□□□ 0.05
VPS33A-205ENST00000541169 OR10R2Q8NGX6 335 aa15.35■□□□□ 0.05
VPS33A-205ENST00000541169 AP3S1Q92572 193 aa15.35■□□□□ 0.05
VPS33A-205ENST00000541169 FAAP24Q9BTP7 215 aa15.35■□□□□ 0.05
VPS33A-205ENST00000541169 ATG5Q9H1Y0 275 aa15.35■□□□□ 0.05
VPS33A-205ENST00000541169 TMEM133Q9H2Q1 129 aa15.35■□□□□ 0.05
VPS33A-205ENST00000541169 KCNK15Q9H427 330 aa15.35■□□□□ 0.05
VPS33A-205ENST00000541169 PRDM13Q9H4Q3 707 aa15.35■□□□□ 0.05
VPS33A-205ENST00000541169 ZMAT3Q9HA38 289 aaKnown RBP15.35■□□□□ 0.05
VPS33A-205ENST00000541169 ING3Q9NXR8 418 aa15.35■□□□□ 0.05
VPS33A-205ENST00000541169 CALYQ9NYX4 217 aa15.35■□□□□ 0.05
VPS33A-205ENST00000541169 ZNF581Q9P0T4 197 aa15.35■□□□□ 0.05
VPS33A-205ENST00000541169 ZNF69Q9UC07 566 aa15.35■□□□□ 0.05
VPS33A-205ENST00000541169 FAM96BQ9Y3D0 163 aa15.35■□□□□ 0.05
VPS33A-205ENST00000541169 TRBV6-6A0A0A6YYG2 114 aa15.34■□□□□ 0.05
VPS33A-205ENST00000541169 UBE2QL1A1L167 161 aa15.34■□□□□ 0.05
VPS33A-205ENST00000541169 SMIM30A4D0T7 59 aa15.34■□□□□ 0.05
VPS33A-205ENST00000541169 FOXI3A8MTJ6 420 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms