RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 PSG2P11465 335 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 LMO1P25800 156 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 CD80P33681 288 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 OR3A1P47881 315 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 SEC61A1P61619 476 aaKnown RBP10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 IL13RA1P78552 427 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 COL10A1Q03692 680 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 SRSF7Q16629 238 aaKnown RBP eCLIP10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 KCTD9Q7L273 389 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 ZBTB8BQ8NAP8 495 aaPredicted RBP10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 ZFAND1Q8TCF1 268 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 COQ2Q96H96 371 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 OR1A1Q9P1Q5 309 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 OPN4Q9UHM6 478 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 MGAT4AQ9UM21 535 aa10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 RAI1Q7Z5J4 1906 aaPredicted RBP10.3□□□□□ -0.76
AP003559.1-201ENST00000540906 TPD52L2O43399 206 aaKnown RBP10.29□□□□□ -0.76
AP003559.1-201ENST00000540906 CTSDP07339 412 aaPredicted RBP10.29□□□□□ -0.76
AP003559.1-201ENST00000540906 DNASE1P24855 282 aa10.29□□□□□ -0.76
AP003559.1-201ENST00000540906 ERP29P30040 261 aaKnown RBP10.29□□□□□ -0.76
AP003559.1-201ENST00000540906 HLA-DRB3P79483 266 aa10.29□□□□□ -0.76
AP003559.1-201ENST00000540906 TNFAIP6P98066 277 aaPredicted RBP10.29□□□□□ -0.76
AP003559.1-201ENST00000540906 TFF3Q07654 80 aa10.29□□□□□ -0.76
AP003559.1-201ENST00000540906 RBM39Q14498 530 aaKnown RBP10.29□□□□□ -0.76
AP003559.1-201ENST00000540906 PHLDA2Q53GA4 152 aa10.29□□□□□ -0.76
AP003559.1-201ENST00000540906 TMEM128Q5BJH2 165 aa10.29□□□□□ -0.76
AP003559.1-201ENST00000540906 SHEQ5VZ18 495 aa10.29□□□□□ -0.76
AP003559.1-201ENST00000540906 FAHD2BQ6P2I3 314 aaPredicted RBP10.29□□□□□ -0.76
AP003559.1-201ENST00000540906 TPRX1Q8N7U7 411 aa10.29□□□□□ -0.76
AP003559.1-201ENST00000540906 OR5M8Q8NGP6 311 aa10.29□□□□□ -0.76
AP003559.1-201ENST00000540906 MOB3AQ96BX8 217 aa10.29□□□□□ -0.76
AP003559.1-201ENST00000540906 FAHD2AQ96GK7 314 aa10.29□□□□□ -0.76
AP003559.1-201ENST00000540906 GPHA2Q96T91 129 aa10.29□□□□□ -0.76
AP003559.1-201ENST00000540906 SHARPINQ9H0F6 387 aa10.29□□□□□ -0.76
AP003559.1-201ENST00000540906 PARP12Q9H0J9 701 aaKnown RBP10.29□□□□□ -0.76
AP003559.1-201ENST00000540906 A0A1B0GW55 424 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 DBX1A6NMT0 343 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 MPTX1A8MV57 137 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 CYB5R3P00387 301 aaPredicted RBP10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 LHBP01229 141 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 PPYP01298 95 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 DUX4L2P0CJ85 424 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 DUX4L3P0CJ86 424 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 DUX4L4P0CJ87 422 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 DUX4L5P0CJ88 424 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 DUX4L6P0CJ89 424 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 DUX4L7P0CJ90 424 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 ZNF728P0DKX0 622 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 SELLP14151 372 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 TAS2R31P59538 309 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 AESQ08117 197 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 SURF2Q15527 256 aaPredicted RBP10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 DUX4L9Q6RFH8 374 aaPredicted RBP10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 LILRB1Q8NHL6 650 aaPredicted RBP10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 SEC22AQ96IW7 307 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 KIRREL1Q96J84 757 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 DCTN5Q9BTE1 182 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 TRAF4Q9BUZ4 470 aaPredicted RBP10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 GCM1Q9NP62 436 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 DUX4Q9UBX2 424 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 WIPI2Q9Y4P8 454 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 KIAA2026Q5HYC2 2103 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 HIVEP3Q5T1R4 2406 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 DSCAMO60469 2012 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 HCFC1P51610 2035 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 PKDREJQ9NTG1 2253 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 DYSFO75923 2080 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 TRAV14DV4A0A0A6YYC5 116 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 ADAP1O75689 374 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 TUSC2O75896 110 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 DUS4LO95620 317 aaKnown RBP10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 GNLYP22749 145 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 LOXP28300 417 aaPredicted RBP10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 GATA4P43694 442 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 SMIM21Q3B7S5 101 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 LGALSLQ3ZCW2 172 aaPredicted RBP10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 C11orf88Q6PI97 169 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 FAM219AQ8IW50 185 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 OR10Z1Q8NGY1 313 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 PRR7Q8TB68 274 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 RIMS4Q9H426 269 aaPredicted RBP10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 COQ3Q9NZJ6 369 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 KIF25Q9UIL4 384 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 C14orf166Q9Y224 244 aaKnown RBP10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 HSPB11Q9Y547 144 aa10.28□□□□□ -0.76
AP003559.1-201ENST00000540906 CRYM-AS1A6NIL9 109 aa10.27□□□□□ -0.77
AP003559.1-201ENST00000540906 ZNF737O75373 536 aa10.27□□□□□ -0.77
AP003559.1-201ENST00000540906 PRDX2P32119 198 aa10.27□□□□□ -0.77
AP003559.1-201ENST00000540906 CFHR2P36980 270 aa10.27□□□□□ -0.77
AP003559.1-201ENST00000540906 MDH2P40926 338 aaKnown RBP10.27□□□□□ -0.77
AP003559.1-201ENST00000540906 GLP1RP43220 463 aa10.27□□□□□ -0.77
AP003559.1-201ENST00000540906 GLIPR1P48060 266 aa10.27□□□□□ -0.77
AP003559.1-201ENST00000540906 KCNJ3P48549 501 aa10.27□□□□□ -0.77
AP003559.1-201ENST00000540906 PIGPP57054 158 aa10.27□□□□□ -0.77
AP003559.1-201ENST00000540906 RAP2BP61225 183 aa10.27□□□□□ -0.77
AP003559.1-201ENST00000540906 CCL8P80075 99 aa10.27□□□□□ -0.77
AP003559.1-201ENST00000540906 MZT1Q08AG7 82 aa10.27□□□□□ -0.77
AP003559.1-201ENST00000540906 MST1LQ2TV78 715 aa10.27□□□□□ -0.77
AP003559.1-201ENST00000540906 SP6Q3SY56 376 aa10.27□□□□□ -0.77
AP003559.1-201ENST00000540906 PRR18Q8N4B5 295 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms