RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 DIRAS3O95661 229 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 MT-ND4P03905 459 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 FCGR3AP08637 254 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 PTHLHP12272 177 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 S100A5P33763 92 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 ZNF45Q02386 682 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 MEF2CQ06413 473 aaPredicted RBP8.71□□□□□ -1.02
VPS33A-204ENST00000540669 KRTAP1-1Q07627 177 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 ATXN7L3Q14CW9 347 aaPredicted RBP8.71□□□□□ -1.02
VPS33A-204ENST00000540669 HMGN3Q15651 99 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 GRK1Q15835 563 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 CDNFQ49AH0 187 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 MOB1BQ7L9L4 216 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 IZUMO1Q8IYV9 350 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 ASCC1Q8N9N2 400 aaKnown RBP8.71□□□□□ -1.02
VPS33A-204ENST00000540669 OR8B3Q8NGG8 313 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 OR5D13Q8NGL4 314 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 C15orf40Q8WUR7 153 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 NUDCD2Q8WVJ2 157 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 SNAPC3Q92966 411 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 NEDD4LQ96PU5 975 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 OR8B2Q96RD0 313 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 OCSTAMPQ9BR26 566 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 HDHD3Q9BSH5 251 aaPredicted RBP8.71□□□□□ -1.02
VPS33A-204ENST00000540669 DCTN5Q9BTE1 182 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 FAAP24Q9BTP7 215 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 CHST6Q9GZX3 395 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 RIMS4Q9H426 269 aaPredicted RBP8.71□□□□□ -1.02
VPS33A-204ENST00000540669 ZMAT3Q9HA38 289 aaKnown RBP8.71□□□□□ -1.02
VPS33A-204ENST00000540669 PLEKHJ1Q9NW61 149 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 RPUSD1Q9UJJ7 312 aaKnown RBP8.71□□□□□ -1.02
VPS33A-204ENST00000540669 KIAA2026Q5HYC2 2103 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 ABCA1O95477 2261 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 SVEP1Q4LDE5 3571 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 TMEM30CPA0ZSE6 113 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 ISPDA4D126 451 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 FAM157AC9JC47 383 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 MCRIP1C9JLW8 97 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 NPIPB11E5RHQ5 1161 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 C15orf65H3BRN8 121 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 H7C1Q1 480 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 SMAD7O15105 426 aaKnown RBP8.7□□□□□ -1.02
VPS33A-204ENST00000540669 RBP4P02753 201 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 LPLP06858 475 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 USF1P22415 310 aaPredicted RBP8.7□□□□□ -1.02
VPS33A-204ENST00000540669 ZFP36P26651 326 aaKnown RBP8.7□□□□□ -1.02
VPS33A-204ENST00000540669 CD40LGP29965 261 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 TALDO1P37837 337 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 GABRA2P47869 451 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 GLIPR1P48060 266 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 PITPNAQ00169 270 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 SSBP1Q04837 148 aaKnown RBP8.7□□□□□ -1.02
VPS33A-204ENST00000540669 NKAPLQ5M9Q1 402 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 ATAD3CQ5T2N8 411 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 NLRC3Q7RTR2 1065 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 LURAP1LQ8IV03 231 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 BPIFB2Q8N4F0 458 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 C11orf42Q8N5U0 333 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 TMEM185AQ8NFB2 350 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 PPP1R35Q8TAP8 253 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 RAB39BQ96DA2 213 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 COX4I2Q96KJ9 171 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 CABLES2Q9BTV7 478 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 TOLLIPQ9H0E2 274 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 Q9N2K0 584 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 C19orf12Q9NSK7 152 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 ETAA1Q9NY74 926 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 LPAR3Q9UBY5 353 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 CLN8Q9UBY8 286 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 MTFP1Q9UDX5 166 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 OPN4Q9UHM6 478 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 ZNF107Q9UII5 783 aaPredicted RBP8.7□□□□□ -1.02
VPS33A-204ENST00000540669 KIF25Q9UIL4 384 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 LINC00312Q9Y6C7 94 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 WNK2Q9Y3S1 2297 aa8.7□□□□□ -1.02
VPS33A-204ENST00000540669 IGKV1D-8A0A087WSZ0 117 aa8.69□□□□□ -1.02
VPS33A-204ENST00000540669 FABP12A6NFH5 140 aa8.69□□□□□ -1.02
VPS33A-204ENST00000540669 FAM25AB3EWG3 89 aa8.69□□□□□ -1.02
VPS33A-204ENST00000540669 FAM25CB3EWG5 89 aa8.69□□□□□ -1.02
VPS33A-204ENST00000540669 FAM25GB3EWG6 89 aa8.69□□□□□ -1.02
VPS33A-204ENST00000540669 HSPB6O14558 160 aa8.69□□□□□ -1.02
VPS33A-204ENST00000540669 NDUFB3O43676 98 aa8.69□□□□□ -1.02
VPS33A-204ENST00000540669 ECDO95905 644 aaPredicted RBP8.69□□□□□ -1.02
VPS33A-204ENST00000540669 DGCR2P98153 550 aa8.69□□□□□ -1.02
VPS33A-204ENST00000540669 AESQ08117 197 aa8.69□□□□□ -1.02
VPS33A-204ENST00000540669 ZNF273Q14593 569 aa8.69□□□□□ -1.02
VPS33A-204ENST00000540669 C17orf58Q2M2W7 97 aa8.69□□□□□ -1.02
VPS33A-204ENST00000540669 LRRC10Q5BKY1 277 aa8.69□□□□□ -1.02
VPS33A-204ENST00000540669 SPANXN2Q5MJ10 180 aa8.69□□□□□ -1.02
VPS33A-204ENST00000540669 KIR3DL3Q8N743 410 aa8.69□□□□□ -1.02
VPS33A-204ENST00000540669 GDPD1Q8N9F7 314 aa8.69□□□□□ -1.02
VPS33A-204ENST00000540669 DTX3Q8N9I9 347 aa8.69□□□□□ -1.02
VPS33A-204ENST00000540669 OR13A1Q8NGR1 328 aa8.69□□□□□ -1.02
VPS33A-204ENST00000540669 OR52I2Q8NH67 350 aa8.69□□□□□ -1.02
VPS33A-204ENST00000540669 S100ZQ8WXG8 99 aa8.69□□□□□ -1.02
VPS33A-204ENST00000540669 SSBP3Q9BWW4 388 aaPredicted RBP8.69□□□□□ -1.02
VPS33A-204ENST00000540669 REG4Q9BYZ8 158 aa8.69□□□□□ -1.02
VPS33A-204ENST00000540669 UNKLQ9H9P5 680 aaKnown RBP8.69□□□□□ -1.02
VPS33A-204ENST00000540669 CSPG4Q6UVK1 2322 aa8.69□□□□□ -1.02
VPS33A-204ENST00000540669 IGHV2-70DA0A0C4DH43 119 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms