RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 PROB1E7EW31 1015 aa11.7□□□□□ -0.54
BNIP3-202ENST00000540159 TRAPPC2LH3BP13 241 aa11.7□□□□□ -0.54
BNIP3-202ENST00000540159 GPR137BO60478 399 aa11.7□□□□□ -0.54
BNIP3-202ENST00000540159 ATP6V0CP27449 155 aa11.7□□□□□ -0.54
BNIP3-202ENST00000540159 VAMP2P63027 116 aa11.7□□□□□ -0.54
BNIP3-202ENST00000540159 TMEM267Q0VDI3 215 aaPredicted RBP11.7□□□□□ -0.54
BNIP3-202ENST00000540159 OR1C1Q15619 314 aa11.7□□□□□ -0.54
BNIP3-202ENST00000540159 OR2B11Q5JQS5 317 aa11.7□□□□□ -0.54
BNIP3-202ENST00000540159 C10orf91Q5T1B1 145 aa11.7□□□□□ -0.54
BNIP3-202ENST00000540159 ZNF100Q8IYN0 542 aa11.7□□□□□ -0.54
BNIP3-202ENST00000540159 SUCNR1Q9BXA5 334 aa11.7□□□□□ -0.54
BNIP3-202ENST00000540159 PLEKHA2Q9HB19 425 aa11.7□□□□□ -0.54
BNIP3-202ENST00000540159 LUZP4Q9P127 313 aa11.7□□□□□ -0.54
BNIP3-202ENST00000540159 LIPGQ9Y5X9 500 aa11.7□□□□□ -0.54
BNIP3-202ENST00000540159 A0A0G2JRQ6 117 aa11.7□□□□□ -0.54
BNIP3-202ENST00000540159 A0A1W2PNU3 283 aaPredicted RBP11.7□□□□□ -0.54
BNIP3-202ENST00000540159 ZNF727A8MUV8 499 aa11.7□□□□□ -0.54
BNIP3-202ENST00000540159 H7C1Q1 480 aa11.7□□□□□ -0.54
BNIP3-202ENST00000540159 CYTIPO60759 359 aa11.7□□□□□ -0.54
BNIP3-202ENST00000540159 ERVS71-1P61550 626 aa11.7□□□□□ -0.54
BNIP3-202ENST00000540159 GCNT2Q8N0V5 402 aa11.7□□□□□ -0.54
BNIP3-202ENST00000540159 GALNT14Q96FL9 552 aa11.7□□□□□ -0.54
BNIP3-202ENST00000540159 GLRX2Q9NS18 164 aa11.7□□□□□ -0.54
BNIP3-202ENST00000540159 SLC22A20A6NK97 555 aa11.69□□□□□ -0.54
BNIP3-202ENST00000540159 C9orf172C9J069 976 aa11.69□□□□□ -0.54
BNIP3-202ENST00000540159 FAM157AC9JC47 383 aa11.69□□□□□ -0.54
BNIP3-202ENST00000540159 SIRPB1O00241 398 aa11.69□□□□□ -0.54
BNIP3-202ENST00000540159 DANCRP0C864 163 aa11.69□□□□□ -0.54
BNIP3-202ENST00000540159 P2RY1P47900 373 aa11.69□□□□□ -0.54
BNIP3-202ENST00000540159 DYNLT3P51808 116 aa11.69□□□□□ -0.54
BNIP3-202ENST00000540159 C1orf210Q8IVY1 113 aa11.69□□□□□ -0.54
BNIP3-202ENST00000540159 ZDHHC23Q8IYP9 409 aa11.69□□□□□ -0.54
BNIP3-202ENST00000540159 OR1K1Q8NGR3 316 aa11.69□□□□□ -0.54
BNIP3-202ENST00000540159 OR1A1Q9P1Q5 309 aa11.69□□□□□ -0.54
BNIP3-202ENST00000540159 PPP1R3CQ9UQK1 317 aa11.69□□□□□ -0.54
BNIP3-202ENST00000540159 HEATR1Q9H583 2144 aaKnown RBP11.69□□□□□ -0.54
BNIP3-202ENST00000540159 IAPPP10997 89 aa11.69□□□□□ -0.54
BNIP3-202ENST00000540159 ECI1P42126 302 aa11.69□□□□□ -0.54
BNIP3-202ENST00000540159 CEBPDP49716 269 aaPredicted RBP11.69□□□□□ -0.54
BNIP3-202ENST00000540159 SLC25A24Q6NUK1 477 aa11.69□□□□□ -0.54
BNIP3-202ENST00000540159 CCDC71LQ8N9Z2 235 aa11.69□□□□□ -0.54
BNIP3-202ENST00000540159 BOD1Q96IK1 185 aa11.69□□□□□ -0.54
BNIP3-202ENST00000540159 TTTY12Q9BZ98 90 aa11.69□□□□□ -0.54
BNIP3-202ENST00000540159 DECR2Q9NUI1 292 aa11.69□□□□□ -0.54
BNIP3-202ENST00000540159 ERRFI1Q9UJM3 462 aaPredicted RBP11.69□□□□□ -0.54
BNIP3-202ENST00000540159 MMP24Q9Y5R2 645 aa11.69□□□□□ -0.54
BNIP3-202ENST00000540159 PCNX1Q96RV3 2341 aa11.69□□□□□ -0.54
BNIP3-202ENST00000540159 CHD3Q12873 2000 aaKnown RBP11.69□□□□□ -0.54
BNIP3-202ENST00000540159 NDUFA2O43678 99 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 CHST1O43916 411 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 SERPINA7P05543 415 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 CELA3BP08861 270 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 LHX2P50458 406 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 MCEMP1Q8IX19 187 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 HIST1H2AAQ96QV6 131 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 C1QTNF5Q9BXJ0 243 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 KCNJ16Q9NPI9 418 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 BOKQ9UMX3 212 aaPredicted RBP11.68□□□□□ -0.54
BNIP3-202ENST00000540159 POLEQ07864 2286 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 RPL36A-HNRNPH2H7BZ11 118 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 GAPDHP04406 335 aaKnown RBP11.68□□□□□ -0.54
BNIP3-202ENST00000540159 S100A6P06703 90 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 PMP22Q01453 160 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 HABP2Q14520 560 aaPredicted RBP11.68□□□□□ -0.54
BNIP3-202ENST00000540159 DHRS13Q6UX07 377 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 TMEM251Q8N6I4 163 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 LILRB1Q8NHL6 650 aaPredicted RBP11.68□□□□□ -0.54
BNIP3-202ENST00000540159 SFT2D1Q8WV19 159 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 HIST1H2BAQ96A08 127 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 APH1AQ96BI3 265 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 TMEM222Q9H0R3 208 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 ZNF703Q9H7S9 590 aaPredicted RBP11.68□□□□□ -0.54
BNIP3-202ENST00000540159 KCNS2Q9ULS6 477 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 CD300LBA8K4G0 201 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 HSPA12AO43301 675 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 SYNGR4O95473 234 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 RD3LP0DJH9 198 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 SSPNQ14714 243 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 MKXQ8IYA7 352 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 SUMF2Q8NBJ7 301 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 PLPPR2Q96GM1 343 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 SMCO4Q9NRQ5 59 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 OR14J1Q9UGF5 321 aa11.68□□□□□ -0.54
BNIP3-202ENST00000540159 TRDCB7Z8K6 153 aa11.67□□□□□ -0.54
BNIP3-202ENST00000540159 TXNL1O43396 289 aa11.67□□□□□ -0.54
BNIP3-202ENST00000540159 CA11O75493 328 aa11.67□□□□□ -0.54
BNIP3-202ENST00000540159 WISP2O76076 250 aa11.67□□□□□ -0.54
BNIP3-202ENST00000540159 PSG2P11465 335 aa11.67□□□□□ -0.54
BNIP3-202ENST00000540159 ZNF14P17017 642 aaPredicted RBP11.67□□□□□ -0.54
BNIP3-202ENST00000540159 CLDN18P56856 261 aa11.67□□□□□ -0.54
BNIP3-202ENST00000540159 ALKBH6Q3KRA9 238 aa11.67□□□□□ -0.54
BNIP3-202ENST00000540159 SELENOHQ8IZQ5 122 aaKnown RBP11.67□□□□□ -0.54
BNIP3-202ENST00000540159 TMEM252Q8N6L7 170 aa11.67□□□□□ -0.54
BNIP3-202ENST00000540159 OR4D5Q8NGN0 318 aa11.67□□□□□ -0.54
BNIP3-202ENST00000540159 REPIN1Q9BWE0 567 aaKnown RBP11.67□□□□□ -0.54
BNIP3-202ENST00000540159 BIN3Q9NQY0 253 aa11.67□□□□□ -0.54
BNIP3-202ENST00000540159 WDR1O75083 606 aa11.67□□□□□ -0.54
BNIP3-202ENST00000540159 ZNF806P0C7X5 589 aa11.67□□□□□ -0.54
BNIP3-202ENST00000540159 TRA2AQ13595 282 aaKnown RBP eCLIP11.67□□□□□ -0.54
BNIP3-202ENST00000540159 Q6ZSR3 168 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms