RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 GFI1BQ5VTD9 330 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 STAC2Q6ZMT1 411 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 PECRQ9BY49 303 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 SLC2A8Q9NY64 477 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 NINQ8N4C6 2090 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 H3BVH4 76 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 ORM1P02763 201 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 HOXC12P31275 282 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 ZNF93P35789 620 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-214ENST00000540109 SRSF3P84103 164 aaKnown RBP5.34□□□□□ -1.55
PTPRD-214ENST00000540109 ZNF750Q32MQ0 723 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 TTC32Q5I0X7 151 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 DMRTC2Q8IXT2 367 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-214ENST00000540109 RPS4Y2Q8TD47 263 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 SLC25A43Q8WUT9 341 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-214ENST00000540109 RTN4IP1Q8WWV3 396 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-214ENST00000540109 WFDC12Q8WWY7 111 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 PRSS27Q9BQR3 290 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 ADGRL4Q9HBW9 690 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 DNAJB12Q9NXW2 375 aaKnown RBP5.34□□□□□ -1.55
PTPRD-214ENST00000540109 PRSS50Q9UI38 385 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 ZNF253O75346 499 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 NEURL1O76050 574 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 ONECUT2O95948 504 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 BLVRBP30043 206 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-214ENST00000540109 APLNRP35414 380 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 GPM6AP51674 278 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 HLA-DRB5Q30154 266 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 MESTQ5EB52 335 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 TPTE2P1Q5T6R2 138 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 DMKNQ6E0U4 476 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-214ENST00000540109 LINC00114Q6XXX2 140 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 BPIFA4PQ86YQ2 179 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 ADAMTS17Q8TE56 1095 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 NPDC1Q9NQX5 325 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-214ENST00000540109 TMEM167BQ9NRX6 74 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 ZFP30Q9Y2G7 519 aa5.34□□□□□ -1.55
PTPRD-214ENST00000540109 ZNF860A6NHJ4 632 aa5.34□□□□□ -1.56
PTPRD-214ENST00000540109 VAMP5O95183 116 aa5.34□□□□□ -1.56
PTPRD-214ENST00000540109 VSIG10L2P0DP72 767 aa5.34□□□□□ -1.56
PTPRD-214ENST00000540109 CLEC18BQ6UXF7 455 aa5.34□□□□□ -1.56
PTPRD-214ENST00000540109 C16orf82Q7Z2V1 217 aa5.34□□□□□ -1.56
PTPRD-214ENST00000540109 PTPMT1Q8WUK0 201 aaPredicted RBP5.34□□□□□ -1.56
PTPRD-214ENST00000540109 ORAOV1Q8WV07 137 aa5.34□□□□□ -1.56
PTPRD-214ENST00000540109 DNASE2BQ8WZ79 361 aa5.34□□□□□ -1.56
PTPRD-214ENST00000540109 OR2V2Q96R30 315 aa5.34□□□□□ -1.56
PTPRD-214ENST00000540109 PSMG3Q9BT73 122 aaPredicted RBP5.34□□□□□ -1.56
PTPRD-214ENST00000540109 DUSP15Q9H1R2 295 aaPredicted RBP5.34□□□□□ -1.56
PTPRD-214ENST00000540109 KCNK15Q9H427 330 aa5.34□□□□□ -1.56
PTPRD-214ENST00000540109 GLRX2Q9NS18 164 aa5.34□□□□□ -1.56
PTPRD-214ENST00000540109 SLC45A2Q9UMX9 530 aa5.34□□□□□ -1.56
PTPRD-214ENST00000540109 A0A1B0GWA3 101 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 H0YL77 283 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 MPDU1O75352 247 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 LYPD3O95274 346 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 EMDP50402 254 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 POC1AQ8NBT0 407 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 CLDN23Q96B33 292 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 SIGLEC7Q9Y286 467 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 H3BP45 60 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 HBZP02008 142 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 LCATP04180 440 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 SUMO3P55854 103 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-214ENST00000540109 VAX1Q5SQQ9 334 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 ROBO4Q8WZ75 1007 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 NRSN2Q9GZP1 204 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 GTSF1LQ9H1H1 148 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 AURKAIP1Q9NWT8 199 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-214ENST00000540109 F13BP05160 661 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 PVRP15151 417 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 CLDN15P56746 228 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 HIKESHIQ53FT3 197 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 D2HGDHQ8N465 521 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 CYB561D1Q8N8Q1 229 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 IL1F10Q8WWZ1 152 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 ZNF48Q96MX3 618 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-214ENST00000540109 RTL8AQ9BWD3 113 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 WDR61Q9GZS3 305 aaKnown RBP5.33□□□□□ -1.56
PTPRD-214ENST00000540109 TAS2R4Q9NYW5 299 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 A0A087WUJ7 227 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 LDB3O75112 727 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 WNT11O96014 354 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 GYPAP02724 150 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 AGAP20933 346 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 SPSB1Q96BD6 273 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 ZG16BQ96DA0 208 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 MMABQ96EY8 250 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-214ENST00000540109 SIGMAR1Q99720 223 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 NTNG1Q9Y2I2 539 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 OR2M5A3KFT3 312 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 FAM221AA4D161 298 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 C7orf71A4D174 169 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 F5H5K5 113 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 FOXS1O43638 330 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 IGFBP4P22692 258 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 LPAR6P43657 344 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 GLIPR1P48060 266 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 GAS1P54826 345 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 ZP1P60852 638 aa5.33□□□□□ -1.56
PTPRD-214ENST00000540109 PSG6Q00889 435 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms