RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 IFNA21P01568 189 aa12.51□□□□□ -0.41
ATL3-203ENST00000538786 LMO1P25800 156 aa12.51□□□□□ -0.41
ATL3-203ENST00000538786 GNRHRP30968 328 aa12.51□□□□□ -0.41
ATL3-203ENST00000538786 CCKARP32238 428 aa12.51□□□□□ -0.41
ATL3-203ENST00000538786 KCNJ3P48549 501 aa12.51□□□□□ -0.41
ATL3-203ENST00000538786 RBPJQ06330 500 aa12.51□□□□□ -0.41
ATL3-203ENST00000538786 PCSK4Q6UW60 755 aa12.51□□□□□ -0.41
ATL3-203ENST00000538786 SLC51BQ86UW2 128 aa12.51□□□□□ -0.41
ATL3-203ENST00000538786 ZNF565Q8N9K5 539 aa12.51□□□□□ -0.41
ATL3-203ENST00000538786 INO80EQ8NBZ0 244 aaPredicted RBP12.51□□□□□ -0.41
ATL3-203ENST00000538786 OR11L1Q8NGX0 322 aa12.51□□□□□ -0.41
ATL3-203ENST00000538786 CABLES2Q9BTV7 478 aa12.51□□□□□ -0.41
ATL3-203ENST00000538786 RNF126Q9BV68 326 aa12.51□□□□□ -0.41
ATL3-203ENST00000538786 TUBD1Q9UJT1 453 aa12.51□□□□□ -0.41
ATL3-203ENST00000538786 SPENQ96T58 3664 aaKnown RBP12.51□□□□□ -0.41
ATL3-203ENST00000538786 CD200P41217 278 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 KLF3P57682 345 aaPredicted RBP12.5□□□□□ -0.41
ATL3-203ENST00000538786 RPS23P62266 143 aaKnown RBP12.5□□□□□ -0.41
ATL3-203ENST00000538786 SP6Q3SY56 376 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 CLLU1Q5K131 121 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 ACP7Q6ZNF0 438 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 LRP11Q86VZ4 500 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 LDLRAD3Q86YD5 345 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 OR2Z1Q8NG97 314 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 UFSP2Q9NUQ7 469 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 OR14J1Q9UGF5 321 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 MGAQ8IWI9 3026 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 SVILO95425 2214 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 IGLV3-9A0A075B6K5 115 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 NPIPB11E5RHQ5 1161 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 ATP6V1G2-DDX39BF2Z307 99 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 C16orf97H3BN30 126 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 WNT9BO14905 357 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 MPPED1O15442 326 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 B3GALNT1O75752 331 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 PTBP3O95758 552 aaKnown RBP12.5□□□□□ -0.41
ATL3-203ENST00000538786 PET100P0DJ07 73 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 LYL1P12980 280 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 RND3P61587 244 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 PRSS54Q6PEW0 395 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 LIAT1Q6ZQX7 453 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 C22orf34Q6ZV56 151 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 OR10J5Q8NHC4 309 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 PRR7Q8TB68 274 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 TMEM171Q8WVE6 324 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 SECTM1Q8WVN6 248 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 GSX2Q9BZM3 304 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 MBNL3Q9NUK0 354 aaKnown RBP12.5□□□□□ -0.41
ATL3-203ENST00000538786 JKAMPQ9P055 326 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 TAAR3PQ9P1P4 343 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 SH3BGRL2Q9UJC5 107 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 TRAPPC2LQ9UL33 140 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 WIPI2Q9Y4P8 454 aa12.5□□□□□ -0.41
ATL3-203ENST00000538786 RPS10-NUDT3A0A1W2PQS6 291 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 hCG_1807616A0A1W2PRN6 198 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 TUBAL3A6NHL2 446 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 H0YIZ8 118 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 GPR31O00270 319 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 BCL2L11O43521 198 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 CD40P25942 277 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 RAB14P61106 215 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 IAH1Q2TAA2 248 aaPredicted RBP12.49□□□□□ -0.41
ATL3-203ENST00000538786 GGNBP1Q5YKI7 109 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 H1FOOQ8IZA3 346 aaPredicted RBP12.49□□□□□ -0.41
ATL3-203ENST00000538786 LGI3Q8N145 548 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 GLYATL2Q8WU03 294 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 DCUN1D4Q92564 292 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 MRPL24Q96A35 216 aaKnown RBP12.49□□□□□ -0.41
ATL3-203ENST00000538786 MSI2Q96DH6 328 aaKnown RBP12.49□□□□□ -0.41
ATL3-203ENST00000538786 C18orf12Q96KH6 178 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 SLC5A7Q9GZV3 580 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 GSKIPQ9P0R6 139 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 IGKV1D-13A0A0B4J2D9 117 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 C3orf85A0A1B0GTC6 90 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 KANTRA0A1W2PQU2 76 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 LINC00862A6NCI5 91 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 ZSCAN5BA6NJL1 495 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 PHF1O43189 567 aaPredicted RBP12.49□□□□□ -0.41
ATL3-203ENST00000538786 PSPNO60542 156 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 IGKV1-13P0DP09 117 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 CEBPDP49716 269 aaPredicted RBP12.49□□□□□ -0.41
ATL3-203ENST00000538786 RAB32Q13637 225 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 SMIM21Q3B7S5 101 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 ZNF818PQ6ZRF7 136 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 RELL2Q8NC24 303 aaPredicted RBP12.49□□□□□ -0.41
ATL3-203ENST00000538786 KIRREL1Q96J84 757 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 OR2W1Q9Y3N9 320 aa12.49□□□□□ -0.41
ATL3-203ENST00000538786 IFNL4K9M1U5 179 aa12.48□□□□□ -0.41
ATL3-203ENST00000538786 SRPXP78539 464 aa12.48□□□□□ -0.41
ATL3-203ENST00000538786 VHLLQ6RSH7 139 aa12.48□□□□□ -0.41
ATL3-203ENST00000538786 SSX8Q7RTT4 187 aa12.48□□□□□ -0.41
ATL3-203ENST00000538786 OR10Z1Q8NGY1 313 aa12.48□□□□□ -0.41
ATL3-203ENST00000538786 SCARB1Q8WTV0 552 aa12.48□□□□□ -0.41
ATL3-203ENST00000538786 LRRC29Q8WV35 223 aa12.48□□□□□ -0.41
ATL3-203ENST00000538786 TP53RKQ96S44 253 aa12.48□□□□□ -0.41
ATL3-203ENST00000538786 FBXO9Q9UK97 447 aaPredicted RBP12.48□□□□□ -0.41
ATL3-203ENST00000538786 ESPL1Q14674 2120 aa12.47□□□□□ -0.41
ATL3-203ENST00000538786 TMEM30CPA0ZSE6 113 aa12.47□□□□□ -0.41
ATL3-203ENST00000538786 CFHR2P36980 270 aa12.47□□□□□ -0.41
ATL3-203ENST00000538786 SELENOVP59797 346 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms