RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 FAM90A9PA6NNJ1 464 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 FAM90A12PA8MX19 464 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 FAM90A5PA8MXJ8 464 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 J3QR06 171 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 GABRPO00591 440 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 WBP4O75554 376 aaKnown RBP6.88□□□□□ -1.31
DDB1-212ENST00000538470 AMY1AP04745 511 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 AMY2AP04746 511 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 FAM90A15PP0C7V4 464 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 FAM90A13PP0C7W8 464 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 FAM90A14PP0C7W9 464 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 FAM90A24PP0C7X0 464 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 IGLL1P15814 213 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 CD24P25063 80 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 NFYBP25208 207 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 SLC6A1P30531 599 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 ADARB1P78563 741 aaKnown RBP6.88□□□□□ -1.31
DDB1-212ENST00000538470 MADCAM1Q13477 382 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 NHLRC3Q5JS37 347 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 KHDC1LQ5JSQ8 128 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 RSBN1Q5VWQ0 802 aaPredicted RBP6.88□□□□□ -1.31
DDB1-212ENST00000538470 RNF144BQ7Z419 303 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 LINC00596Q86U02 117 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 LHFPL3Q86UP9 236 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 SETD9Q8NE22 299 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 Q8NFD4 153 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 GPR148Q8TDV2 347 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 CHPT1Q8WUD6 406 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 TNFAIP8L1Q8WVP5 186 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 GPER1Q99527 375 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 PDCD1LG2Q9BQ51 273 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 ZNF649Q9BS31 505 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 IFT22Q9H7X7 185 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 ISG20L2Q9H9L3 353 aaKnown RBP6.88□□□□□ -1.31
DDB1-212ENST00000538470 IDI2-AS1Q9NZ38 188 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 KIF25Q9UIL4 384 aa6.88□□□□□ -1.31
DDB1-212ENST00000538470 RPL36Q9Y3U8 105 aaKnown RBP6.88□□□□□ -1.31
DDB1-212ENST00000538470 TRAV24A0A0B4J272 114 aa6.87□□□□□ -1.31
DDB1-212ENST00000538470 IRGMA1A4Y4 181 aa6.87□□□□□ -1.31
DDB1-212ENST00000538470 PSMB11A5LHX3 300 aa6.87□□□□□ -1.31
DDB1-212ENST00000538470 NPIPB11E5RHQ5 1161 aa6.87□□□□□ -1.31
DDB1-212ENST00000538470 E9PI62 339 aa6.87□□□□□ -1.31
DDB1-212ENST00000538470 HSPB6O14558 160 aa6.87□□□□□ -1.31
DDB1-212ENST00000538470 ATP6V1G2O95670 118 aa6.87□□□□□ -1.31
DDB1-212ENST00000538470 SNRNP70P08621 437 aaKnown RBP6.87□□□□□ -1.31
DDB1-212ENST00000538470 PPP3R1P63098 170 aa6.87□□□□□ -1.31
DDB1-212ENST00000538470 RSU1Q15404 277 aa6.87□□□□□ -1.31
DDB1-212ENST00000538470 CCDC58Q4VC31 144 aa6.87□□□□□ -1.31
DDB1-212ENST00000538470 KLHL22Q53GT1 634 aa6.87□□□□□ -1.31
DDB1-212ENST00000538470 ASCL4Q6XD76 172 aa6.87□□□□□ -1.31
DDB1-212ENST00000538470 C8orf59Q8N0T1 100 aaPredicted RBP6.87□□□□□ -1.31
DDB1-212ENST00000538470 COMMD1Q8N668 190 aa6.87□□□□□ -1.31
DDB1-212ENST00000538470 OR52I1Q8NGK6 324 aa6.87□□□□□ -1.31
DDB1-212ENST00000538470 OR13A1Q8NGR1 328 aa6.87□□□□□ -1.31
DDB1-212ENST00000538470 OR56B4Q8NH76 319 aa6.87□□□□□ -1.31
DDB1-212ENST00000538470 DPF1Q92782 380 aa6.87□□□□□ -1.31
DDB1-212ENST00000538470 FAM192AQ9GZU8 254 aa6.87□□□□□ -1.31
DDB1-212ENST00000538470 PAK1IP1Q9NWT1 392 aaPredicted RBP6.87□□□□□ -1.31
DDB1-212ENST00000538470 ING3Q9NXR8 418 aa6.87□□□□□ -1.31
DDB1-212ENST00000538470 TMEM30CPA0ZSE6 113 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 HSD17B6O14756 317 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 ZNF780AO75290 641 aaPredicted RBP6.86□□□□□ -1.31
DDB1-212ENST00000538470 LIMS3P0CW19 117 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 LIMS4P0CW20 117 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 TMEM11P17152 192 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 SSTR5P35346 364 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 RBM11P57052 281 aaKnown RBP6.86□□□□□ -1.31
DDB1-212ENST00000538470 RPL23AP62750 156 aaKnown RBP6.86□□□□□ -1.31
DDB1-212ENST00000538470 SLC35B1P78383 322 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 ZNF816Q0VGE8 651 aaPredicted RBP6.86□□□□□ -1.31
DDB1-212ENST00000538470 DCTN2Q13561 401 aaKnown RBP6.86□□□□□ -1.31
DDB1-212ENST00000538470 HES1Q14469 280 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 MPV17LQ2QL34 196 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 TMEM30BQ3MIR4 351 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 PIGYQ3MUY2 71 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 Q3ZCU0 254 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 C9orf152Q5JTZ5 239 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 RPL22L1Q6P5R6 122 aaKnown RBP6.86□□□□□ -1.31
DDB1-212ENST00000538470 IZUMO2Q6UXV1 221 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 TMPRSS11AQ6ZMR5 421 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 IZUMO1Q8IYV9 350 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 DRAM1Q8N682 238 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 C5orf56Q8N8D9 126 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 LINC00482Q8N8I6 264 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 C8orf31Q8N9H6 132 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 OR51A2Q8NGJ7 313 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 OR52M1Q8NGK5 317 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 OR10X1Q8NGY0 326 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 PLPPR1Q8TBJ4 325 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 MRGPRDQ8TDS7 321 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 RGP1Q92546 391 aaPredicted RBP6.86□□□□□ -1.31
DDB1-212ENST00000538470 NR1H4Q96RI1 486 aaPredicted RBP6.86□□□□□ -1.31
DDB1-212ENST00000538470 MCRIP2Q9BUT9 160 aaKnown RBP6.86□□□□□ -1.31
DDB1-212ENST00000538470 DPCDQ9BVM2 203 aaPredicted RBP6.86□□□□□ -1.31
DDB1-212ENST00000538470 METTL9Q9H1A3 318 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 VCX3BQ9H321 246 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 RAB9BQ9NP90 201 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 FGF20Q9NP95 211 aaPredicted RBP6.86□□□□□ -1.31
DDB1-212ENST00000538470 TMEM138Q9NPI0 162 aa6.86□□□□□ -1.31
DDB1-212ENST00000538470 TAS2R4Q9NYW5 299 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms