RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 EFNB1P98172 346 aa10.95□□□□□ -0.66
SMARCA4-206ENST00000538456 CDK5R1Q15078 307 aa10.95□□□□□ -0.66
SMARCA4-206ENST00000538456 ZFAND6Q6FIF0 208 aa10.95□□□□□ -0.66
SMARCA4-206ENST00000538456 ZFP1Q6P2D0 407 aa10.95□□□□□ -0.66
SMARCA4-206ENST00000538456 SPATA24Q86W54 205 aa10.95□□□□□ -0.66
SMARCA4-206ENST00000538456 TGIF2LXQ8IUE1 241 aa10.95□□□□□ -0.66
SMARCA4-206ENST00000538456 AQP12AQ8IXF9 295 aa10.95□□□□□ -0.66
SMARCA4-206ENST00000538456 ZNF565Q8N9K5 539 aa10.95□□□□□ -0.66
SMARCA4-206ENST00000538456 OR51T1Q8NGJ9 327 aa10.95□□□□□ -0.66
SMARCA4-206ENST00000538456 OR13C9Q8NGT0 318 aa10.95□□□□□ -0.66
SMARCA4-206ENST00000538456 MRGPRDQ8TDS7 321 aa10.95□□□□□ -0.66
SMARCA4-206ENST00000538456 C4orf3Q8WVX3 66 aa10.95□□□□□ -0.66
SMARCA4-206ENST00000538456 EAF1Q96JC9 268 aaPredicted RBP10.95□□□□□ -0.66
SMARCA4-206ENST00000538456 OSBPL10Q9BXB5 764 aa10.95□□□□□ -0.66
SMARCA4-206ENST00000538456 ABCG5Q9H222 651 aa10.95□□□□□ -0.66
SMARCA4-206ENST00000538456 KRT84Q9NSB2 600 aa10.95□□□□□ -0.66
SMARCA4-206ENST00000538456 LIN7CQ9NUP9 197 aaKnown RBP10.95□□□□□ -0.66
SMARCA4-206ENST00000538456 DNAH1Q9P2D7 4330 aa10.94□□□□□ -0.66
SMARCA4-206ENST00000538456 CSMD3Q7Z407 3707 aa10.94□□□□□ -0.66
SMARCA4-206ENST00000538456 TRAV39A0A0B4J263 110 aa10.94□□□□□ -0.66
SMARCA4-206ENST00000538456 TCRBV3S1A0A5B6 114 aa10.94□□□□□ -0.66
SMARCA4-206ENST00000538456 ZAR1LA6NP61 321 aa10.94□□□□□ -0.66
SMARCA4-206ENST00000538456 H0YJX3 145 aa10.94□□□□□ -0.66
SMARCA4-206ENST00000538456 CCRL2O00421 344 aa10.94□□□□□ -0.66
SMARCA4-206ENST00000538456 ELANEP08246 267 aa10.94□□□□□ -0.66
SMARCA4-206ENST00000538456 C21orf33P30042 268 aaPredicted RBP10.94□□□□□ -0.66
SMARCA4-206ENST00000538456 ATP6V1E1P36543 226 aa10.94□□□□□ -0.66
SMARCA4-206ENST00000538456 FHL3Q13643 280 aa10.94□□□□□ -0.66
SMARCA4-206ENST00000538456 PAN3Q58A45 887 aaKnown RBP10.94□□□□□ -0.66
SMARCA4-206ENST00000538456 C12orf73Q69YU5 71 aa10.94□□□□□ -0.66
SMARCA4-206ENST00000538456 Q8N9W7 124 aa10.94□□□□□ -0.66
SMARCA4-206ENST00000538456 OR11H1Q8NG94 326 aa10.94□□□□□ -0.66
SMARCA4-206ENST00000538456 OR10AC1Q8NH08 325 aa10.94□□□□□ -0.66
SMARCA4-206ENST00000538456 NR1H4Q96RI1 486 aaPredicted RBP10.94□□□□□ -0.66
SMARCA4-206ENST00000538456 S100A14Q9HCY8 104 aa10.94□□□□□ -0.66
SMARCA4-206ENST00000538456 WARS2Q9UGM6 360 aaKnown RBP10.94□□□□□ -0.66
SMARCA4-206ENST00000538456 SIRT4Q9Y6E7 314 aaPredicted RBP10.94□□□□□ -0.66
SMARCA4-206ENST00000538456 IGHV1-3A0A0C4DH29 117 aa10.93□□□□□ -0.66
SMARCA4-206ENST00000538456 TMEM225BP0DP42 221 aa10.93□□□□□ -0.66
SMARCA4-206ENST00000538456 HOXB6P17509 224 aaKnown RBP10.93□□□□□ -0.66
SMARCA4-206ENST00000538456 HTR1FP30939 366 aa10.93□□□□□ -0.66
SMARCA4-206ENST00000538456 RCN1Q15293 331 aa10.93□□□□□ -0.66
SMARCA4-206ENST00000538456 TMEM244Q5VVB8 128 aa10.93□□□□□ -0.66
SMARCA4-206ENST00000538456 Q8N6K4 173 aa10.93□□□□□ -0.66
SMARCA4-206ENST00000538456 RNF152Q8N8N0 203 aa10.93□□□□□ -0.66
SMARCA4-206ENST00000538456 OR51A4Q8NGJ6 313 aa10.93□□□□□ -0.66
SMARCA4-206ENST00000538456 OR13C3Q8NGS6 347 aa10.93□□□□□ -0.66
SMARCA4-206ENST00000538456 OR2G2Q8NGZ5 317 aa10.93□□□□□ -0.66
SMARCA4-206ENST00000538456 RNF166Q96A37 237 aaPredicted RBP10.93□□□□□ -0.66
SMARCA4-206ENST00000538456 RBMXL1Q96E39 390 aaKnown RBP10.93□□□□□ -0.66
SMARCA4-206ENST00000538456 HSPB9Q9BQS6 159 aa10.93□□□□□ -0.66
SMARCA4-206ENST00000538456 HYDINQ4G0P3 5121 aa10.93□□□□□ -0.66
SMARCA4-206ENST00000538456 TRAV24A0A0B4J272 114 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 NPIPB11E5RHQ5 1161 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 MPZL2O60487 215 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 IGHG4P01861 327 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 GAPDHP04406 335 aaKnown RBP10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 HCKP08631 526 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 FRMD6-AS1P0C7T7 363 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 VDAC1P21796 283 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 ISL1P61371 349 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 CFHR3Q02985 330 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 ZNF85Q03923 595 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 ZNF816Q0VGE8 651 aaPredicted RBP10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 EBI3Q14213 229 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 FAM27D1Q5T7N8 215 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 IZUMO1Q8IYV9 350 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 SAXO1Q8IYX7 474 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 OR2T10Q8NGZ9 312 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 PLPPR1Q8TBJ4 325 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 PYDC1Q8WXC3 89 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 RNFT2Q96EX2 444 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 NRBF2Q96F24 287 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 OR5B12Q96R08 314 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 MBOAT4Q96T53 435 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 RASL11BQ9BPW5 248 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 BARHL1Q9BZE3 327 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 LINC00574Q9H8X3 128 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 RHOFQ9HBH0 211 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 ISYNA1Q9NPH2 558 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 FRRS1LQ9P0K9 344 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 MYRFQ9Y2G1 1151 aa10.92□□□□□ -0.66
SMARCA4-206ENST00000538456 H3BNX3 289 aa10.91□□□□□ -0.66
SMARCA4-206ENST00000538456 MT-ND2P03891 347 aa10.91□□□□□ -0.66
SMARCA4-206ENST00000538456 PSMB8P28062 276 aa10.91□□□□□ -0.66
SMARCA4-206ENST00000538456 INSL3P51460 131 aa10.91□□□□□ -0.66
SMARCA4-206ENST00000538456 NANOS3P60323 173 aaKnown RBP10.91□□□□□ -0.66
SMARCA4-206ENST00000538456 ASPHD1Q5U4P2 390 aa10.91□□□□□ -0.66
SMARCA4-206ENST00000538456 RSBN1Q5VWQ0 802 aaPredicted RBP10.91□□□□□ -0.66
SMARCA4-206ENST00000538456 LPCAT4Q643R3 524 aa10.91□□□□□ -0.66
SMARCA4-206ENST00000538456 FAM53AQ6NSI3 398 aaPredicted RBP10.91□□□□□ -0.66
SMARCA4-206ENST00000538456 UBALD1Q8TB05 177 aa10.91□□□□□ -0.66
SMARCA4-206ENST00000538456 CNIH3Q8TBE1 160 aa10.91□□□□□ -0.66
SMARCA4-206ENST00000538456 S1PR3Q99500 378 aa10.91□□□□□ -0.66
SMARCA4-206ENST00000538456 ZMAT4Q9H898 229 aa10.91□□□□□ -0.66
SMARCA4-206ENST00000538456 GNB4Q9HAV0 340 aa10.91□□□□□ -0.66
SMARCA4-206ENST00000538456 PLSCR3Q9NRY6 295 aa10.91□□□□□ -0.66
SMARCA4-206ENST00000538456 NKX1-2Q9UD57 310 aaPredicted RBP10.91□□□□□ -0.66
SMARCA4-206ENST00000538456 ZNF736B4DX44 427 aaPredicted RBP10.9□□□□□ -0.66
SMARCA4-206ENST00000538456 MOSP00540 346 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms