RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 RPL7P18124 248 aaKnown RBP14.73□□□□□ -0.05
SCARB1-205ENST00000538291 ID1P41134 155 aa14.73□□□□□ -0.05
SCARB1-205ENST00000538291 TMEM33P57088 247 aa14.73□□□□□ -0.05
SCARB1-205ENST00000538291 SEC11CQ9BY50 192 aa14.73□□□□□ -0.05
SCARB1-205ENST00000538291 SF3B6Q9Y3B4 125 aaKnown RBP14.73□□□□□ -0.05
SCARB1-205ENST00000538291 STRCQ7RTU9 1775 aa14.72□□□□□ -0.05
SCARB1-205ENST00000538291 TRBV23-1A0A0A0MS06 115 aa14.72□□□□□ -0.05
SCARB1-205ENST00000538291 SYNGR1O43759 233 aa14.72□□□□□ -0.05
SCARB1-205ENST00000538291 ERVFRD-1P60508 538 aa14.72□□□□□ -0.05
SCARB1-205ENST00000538291 COL13A1Q5TAT6 717 aaPredicted RBP14.72□□□□□ -0.05
SCARB1-205ENST00000538291 OR2W1Q9Y3N9 320 aa14.72□□□□□ -0.05
SCARB1-205ENST00000538291 A0A1W2PNV4 684 aa14.72□□□□□ -0.05
SCARB1-205ENST00000538291 MBPP02686 304 aaPredicted RBP14.72□□□□□ -0.05
SCARB1-205ENST00000538291 PSG5Q15238 335 aa14.72□□□□□ -0.05
SCARB1-205ENST00000538291 FAM78BQ5VT40 261 aa14.72□□□□□ -0.05
SCARB1-205ENST00000538291 TOMM20LQ6UXN7 152 aa14.72□□□□□ -0.05
SCARB1-205ENST00000538291 TMEM116Q8NCL8 245 aa14.72□□□□□ -0.05
SCARB1-205ENST00000538291 ZNF596Q8TC21 504 aa14.72□□□□□ -0.05
SCARB1-205ENST00000538291 OR2J1Q9GZK6 312 aa14.72□□□□□ -0.05
SCARB1-205ENST00000538291 RREB1Q92766 1687 aa14.72□□□□□ -0.05
SCARB1-205ENST00000538291 CHST5Q9GZS9 411 aa14.72□□□□□ -0.05
SCARB1-205ENST00000538291 CHST1O43916 411 aa14.72□□□□□ -0.05
SCARB1-205ENST00000538291 ADAP1O75689 374 aa14.72□□□□□ -0.05
SCARB1-205ENST00000538291 WASHC3Q9Y3C0 194 aa14.72□□□□□ -0.05
SCARB1-205ENST00000538291 DUXBA0A1W2PPF3 345 aa14.71□□□□□ -0.05
SCARB1-205ENST00000538291 HIST1H1EP10412 219 aaKnown RBP14.71□□□□□ -0.05
SCARB1-205ENST00000538291 CD40P25942 277 aa14.71□□□□□ -0.05
SCARB1-205ENST00000538291 ZNF273Q14593 569 aa14.71□□□□□ -0.05
SCARB1-205ENST00000538291 SLC25A42Q86VD7 318 aa14.71□□□□□ -0.05
SCARB1-205ENST00000538291 OR4X1Q8NH49 305 aa14.71□□□□□ -0.05
SCARB1-205ENST00000538291 DDA1Q9BW61 102 aa14.71□□□□□ -0.05
SCARB1-205ENST00000538291 J3KRW8 73 aa14.71□□□□□ -0.05
SCARB1-205ENST00000538291 BMPR1BO00238 502 aa14.71□□□□□ -0.05
SCARB1-205ENST00000538291 FDX2Q6P4F2 183 aa14.71□□□□□ -0.05
SCARB1-205ENST00000538291 CLEC18BQ6UXF7 455 aa14.71□□□□□ -0.05
SCARB1-205ENST00000538291 CLEC9AQ6UXN8 241 aa14.71□□□□□ -0.05
SCARB1-205ENST00000538291 PHYHIPLQ96FC7 376 aa14.71□□□□□ -0.05
SCARB1-205ENST00000538291 PARD6AQ9NPB6 346 aa14.71□□□□□ -0.05
SCARB1-205ENST00000538291 WIPI2Q9Y4P8 454 aa14.71□□□□□ -0.05
SCARB1-205ENST00000538291 ATXN7O15265 892 aaPredicted RBP14.71□□□□□ -0.05
SCARB1-205ENST00000538291 GGTLC2Q14390 218 aa14.71□□□□□ -0.05
SCARB1-205ENST00000538291 FAM214BQ7L5A3 538 aa14.71□□□□□ -0.05
SCARB1-205ENST00000538291 OR4P4Q8NGL7 312 aa14.71□□□□□ -0.05
SCARB1-205ENST00000538291 LINC00052Q96N35 136 aa14.71□□□□□ -0.05
SCARB1-205ENST00000538291 PLAC1Q9HBJ0 212 aa14.71□□□□□ -0.05
SCARB1-205ENST00000538291 IGSF23A1L1A6 192 aa14.71□□□□□ -0.06
SCARB1-205ENST00000538291 OR4C45A6NMZ5 311 aa14.71□□□□□ -0.06
SCARB1-205ENST00000538291 C10orf113Q5VZT2 155 aa14.71□□□□□ -0.06
SCARB1-205ENST00000538291 STXBP6Q8NFX7 210 aa14.71□□□□□ -0.06
SCARB1-205ENST00000538291 DCAF16Q9NXF7 216 aa14.71□□□□□ -0.06
SCARB1-205ENST00000538291 HPXP02790 462 aa14.7□□□□□ -0.06
SCARB1-205ENST00000538291 CCL8P80075 99 aa14.7□□□□□ -0.06
SCARB1-205ENST00000538291 ZNF154Q13106 437 aa14.7□□□□□ -0.06
SCARB1-205ENST00000538291 OR4D11Q8NGI4 311 aa14.7□□□□□ -0.06
SCARB1-205ENST00000538291 ZNF385AQ96PM9 386 aaKnown RBP14.7□□□□□ -0.06
SCARB1-205ENST00000538291 ABHD1Q96SE0 405 aa14.7□□□□□ -0.06
SCARB1-205ENST00000538291 VPS25Q9BRG1 176 aa14.7□□□□□ -0.06
SCARB1-205ENST00000538291 AHRRA9YTQ3 701 aa14.7□□□□□ -0.06
SCARB1-205ENST00000538291 AESQ08117 197 aa14.7□□□□□ -0.06
SCARB1-205ENST00000538291 WFDC3Q8IUB2 231 aa14.7□□□□□ -0.06
SCARB1-205ENST00000538291 EIF4E3Q8N5X7 224 aaKnown RBP14.7□□□□□ -0.06
SCARB1-205ENST00000538291 SSMEM1Q8WWF3 244 aa14.7□□□□□ -0.06
SCARB1-205ENST00000538291 MED19A0JLT2 244 aaPredicted RBP14.7□□□□□ -0.06
SCARB1-205ENST00000538291 RPL36A-HNRNPH2H7BZ11 118 aa14.7□□□□□ -0.06
SCARB1-205ENST00000538291 CTDSPLO15194 276 aa14.7□□□□□ -0.06
SCARB1-205ENST00000538291 PEBP1P30086 187 aaKnown RBP14.7□□□□□ -0.06
SCARB1-205ENST00000538291 LAMB2P55268 1798 aa14.7□□□□□ -0.06
SCARB1-205ENST00000538291 BCORQ6W2J9 1755 aa14.7□□□□□ -0.06
SCARB1-205ENST00000538291 PRSS1P07477 247 aa14.7□□□□□ -0.06
SCARB1-205ENST00000538291 AREGP15514 252 aa14.7□□□□□ -0.06
SCARB1-205ENST00000538291 MMP16P51512 607 aa14.7□□□□□ -0.06
SCARB1-205ENST00000538291 PIGYQ3MUY2 71 aa14.7□□□□□ -0.06
SCARB1-205ENST00000538291 TEX30Q5JUR7 227 aa14.7□□□□□ -0.06
SCARB1-205ENST00000538291 Q9N2K0 584 aa14.7□□□□□ -0.06
SCARB1-205ENST00000538291 ECM29Q5VYK3 1845 aa14.7□□□□□ -0.06
SCARB1-205ENST00000538291 FFAR1O14842 300 aa14.7□□□□□ -0.06
SCARB1-205ENST00000538291 P01737 135 aa14.7□□□□□ -0.06
SCARB1-205ENST00000538291 A0A0J9YW62 118 aa14.69□□□□□ -0.06
SCARB1-205ENST00000538291 PRDX2P32119 198 aa14.69□□□□□ -0.06
SCARB1-205ENST00000538291 IQCJQ1A5X6 159 aa14.69□□□□□ -0.06
SCARB1-205ENST00000538291 PLPPR5Q32ZL2 321 aa14.69□□□□□ -0.06
SCARB1-205ENST00000538291 CLRN3Q8NCR9 226 aa14.69□□□□□ -0.06
SCARB1-205ENST00000538291 OR10C1Q96KK4 312 aa14.69□□□□□ -0.06
SCARB1-205ENST00000538291 NKX2-8O15522 239 aa14.69□□□□□ -0.06
SCARB1-205ENST00000538291 COL8A1P27658 744 aa14.69□□□□□ -0.06
SCARB1-205ENST00000538291 ZNF658BQ4V348 819 aaPredicted RBP14.69□□□□□ -0.06
SCARB1-205ENST00000538291 TMEM251Q8N6I4 163 aa14.69□□□□□ -0.06
SCARB1-205ENST00000538291 ADAMTS17Q8TE56 1095 aa14.69□□□□□ -0.06
SCARB1-205ENST00000538291 CHAC2Q8WUX2 184 aa14.69□□□□□ -0.06
SCARB1-205ENST00000538291 TOLLIPQ9H0E2 274 aa14.69□□□□□ -0.06
SCARB1-205ENST00000538291 SIPA1L3O60292 1781 aaPredicted RBP14.69□□□□□ -0.06
SCARB1-205ENST00000538291 PRR33A8MZF0 331 aa14.69□□□□□ -0.06
SCARB1-205ENST00000538291 ARG1P05089 322 aa14.69□□□□□ -0.06
SCARB1-205ENST00000538291 NPY1RP25929 384 aa14.69□□□□□ -0.06
SCARB1-205ENST00000538291 RIGQ13278 110 aa14.69□□□□□ -0.06
SCARB1-205ENST00000538291 FAM222BQ8WU58 562 aa14.69□□□□□ -0.06
SCARB1-205ENST00000538291 LRRC3BQ96PB8 259 aa14.69□□□□□ -0.06
SCARB1-205ENST00000538291 OPN3Q9H1Y3 402 aaPredicted RBP14.69□□□□□ -0.06
SCARB1-205ENST00000538291 SLC2A9Q9NRM0 540 aa14.69□□□□□ -0.06
SCARB1-205ENST00000538291 NAT8Q9UHE5 227 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms