RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 RPL23AP62750 156 aaKnown RBP6.69□□□□□ -1.34
USP28-203ENST00000537490 EGFEM1PQ0D2K5 195 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 HES1Q14469 280 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 IL13RA2Q14627 380 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 PIGYQ3MUY2 71 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 VAX1Q5SQQ9 334 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 C11orf87Q6NUJ2 197 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 ZNF529Q6P280 563 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 ASCL4Q6XD76 172 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 SATL1Q86VE3 508 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 MRPL41Q8IXM3 137 aaKnown RBP6.69□□□□□ -1.34
USP28-203ENST00000537490 CBR4Q8N4T8 237 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 C5orf56Q8N8D9 126 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 Q8NFD4 153 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 OR52I1Q8NGK6 324 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 RHOXF1Q8NHV9 184 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 TNFAIP8L1Q8WVP5 186 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 TSEN15Q8WW01 171 aaKnown RBP6.69□□□□□ -1.34
USP28-203ENST00000537490 RGP1Q92546 391 aaPredicted RBP6.69□□□□□ -1.34
USP28-203ENST00000537490 MRPL48Q96GC5 212 aaKnown RBP6.69□□□□□ -1.34
USP28-203ENST00000537490 GPER1Q99527 375 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 SLC29A1Q99808 456 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 BARHL1Q9BZE3 327 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 PCDHB16Q9NRJ7 776 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 LINC00527Q9UJ94 153 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 AMMECR1Q9Y4X0 333 aaPredicted RBP6.69□□□□□ -1.34
USP28-203ENST00000537490 GMPPBQ9Y5P6 360 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 LINC01548A6NM66 108 aa6.68□□□□□ -1.34
USP28-203ENST00000537490 SERPINE3A8MV23 424 aa6.68□□□□□ -1.34
USP28-203ENST00000537490 CDRT1O95170 752 aa6.68□□□□□ -1.34
USP28-203ENST00000537490 HTR3BO95264 441 aa6.68□□□□□ -1.34
USP28-203ENST00000537490 CLIC3O95833 236 aa6.68□□□□□ -1.34
USP28-203ENST00000537490 FADS2O95864 444 aaKnown RBP6.68□□□□□ -1.34
USP28-203ENST00000537490 IGKV1D-33P01593 117 aa6.68□□□□□ -1.34
USP28-203ENST00000537490 IGKV1-33P01594 117 aa6.68□□□□□ -1.34
USP28-203ENST00000537490 CCDC159P0C7I6 412 aa6.68□□□□□ -1.34
USP28-203ENST00000537490 TMEM11P17152 192 aa6.68□□□□□ -1.34
USP28-203ENST00000537490 SSTR5P35346 364 aa6.68□□□□□ -1.34
USP28-203ENST00000537490 THBS3P49746 956 aa6.68□□□□□ -1.34
USP28-203ENST00000537490 RAB7AP51149 207 aa6.68□□□□□ -1.34
USP28-203ENST00000537490 GBX2P52951 348 aaPredicted RBP6.68□□□□□ -1.34
USP28-203ENST00000537490 MRPL28Q13084 256 aaKnown RBP6.68□□□□□ -1.34
USP28-203ENST00000537490 MADCAM1Q13477 382 aa6.68□□□□□ -1.34
USP28-203ENST00000537490 XAF1Q6GPH4 301 aa6.68□□□□□ -1.34
USP28-203ENST00000537490 FAM53AQ6NSI3 398 aaPredicted RBP6.68□□□□□ -1.34
USP28-203ENST00000537490 C8orf86Q6ZUL3 223 aa6.68□□□□□ -1.34
USP28-203ENST00000537490 OR2W3Q7Z3T1 314 aa6.68□□□□□ -1.34
USP28-203ENST00000537490 OR8H3Q8N146 312 aa6.68□□□□□ -1.34
USP28-203ENST00000537490 SUMF2Q8NBJ7 301 aa6.68□□□□□ -1.34
USP28-203ENST00000537490 HAVCR2Q8TDQ0 301 aa6.68□□□□□ -1.34
USP28-203ENST00000537490 APH1BQ8WW43 257 aa6.68□□□□□ -1.34
USP28-203ENST00000537490 JAM3Q9BX67 310 aa6.68□□□□□ -1.34
USP28-203ENST00000537490 FAM192AQ9GZU8 254 aa6.68□□□□□ -1.34
USP28-203ENST00000537490 MRPS18AQ9NVS2 196 aaKnown RBP6.68□□□□□ -1.34
USP28-203ENST00000537490 TAS2R4Q9NYW5 299 aa6.68□□□□□ -1.34
USP28-203ENST00000537490 ING4Q9UNL4 249 aa6.68□□□□□ -1.34
USP28-203ENST00000537490 IGHV3-72A0A0B4J1Y9 119 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 LOC100130705A0A1B0GUX0 176 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 C15orf65H3BRN8 121 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 MAGEB3O15480 346 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 FGF16O43320 207 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 MPZL2O60487 215 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 IGHG2P01859 326 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 RPSAP08865 295 aaKnown RBP6.67□□□□□ -1.34
USP28-203ENST00000537490 LIMS3P0CW19 117 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 LIMS4P0CW20 117 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 REG1BP48304 166 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 KCNJ3P48549 501 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 PAX5Q02548 391 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 RAB40BQ12829 278 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 EBI3Q14213 229 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 RSU1Q15404 277 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 ZFP1Q6P2D0 407 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 SLC16A12Q6ZSM3 486 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 SLC35E3Q7Z769 313 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 MOB3BQ86TA1 216 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 OR10A7Q8NGE5 316 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 OR51D1Q8NGF3 324 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 OR10X1Q8NGY0 326 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 UBALD1Q8TB05 177 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 CHPT1Q8WUD6 406 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 ORAI1Q96D31 301 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 RBMXL1Q96E39 390 aaKnown RBP6.67□□□□□ -1.34
USP28-203ENST00000537490 Q96MT0 163 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 DUX3Q96PT4 197 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 MYCBPQ99417 103 aaPredicted RBP6.67□□□□□ -1.34
USP28-203ENST00000537490 P2RX4Q99571 388 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 DPCDQ9BVM2 203 aaPredicted RBP6.67□□□□□ -1.34
USP28-203ENST00000537490 ZFP57Q9NU63 452 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 ST3GAL6Q9Y274 331 aa6.67□□□□□ -1.34
USP28-203ENST00000537490 SIRT4Q9Y6E7 314 aaPredicted RBP6.67□□□□□ -1.34
USP28-203ENST00000537490 IGHV1-3A0A0C4DH29 117 aa6.66□□□□□ -1.34
USP28-203ENST00000537490 A0A1W2PP11 408 aa6.66□□□□□ -1.34
USP28-203ENST00000537490 NUDT19A8MXV4 375 aa6.66□□□□□ -1.34
USP28-203ENST00000537490 CCRL2O00421 344 aa6.66□□□□□ -1.34
USP28-203ENST00000537490 HSD17B6O14756 317 aa6.66□□□□□ -1.34
USP28-203ENST00000537490 GEMIN2O14893 280 aaKnown RBP6.66□□□□□ -1.34
USP28-203ENST00000537490 OR7C1O76099 320 aaPredicted RBP6.66□□□□□ -1.34
USP28-203ENST00000537490 GAPDHP04406 335 aaKnown RBP6.66□□□□□ -1.34
USP28-203ENST00000537490 GZMHP20718 246 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms