RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 DMRTC1Q5HYR2 192 aa12.12□□□□□ -0.47
LIG1-203ENST00000536218 UEVLDQ8IX04 471 aa12.12□□□□□ -0.47
LIG1-203ENST00000536218 OR1L6Q8NGR2 347 aa12.12□□□□□ -0.47
LIG1-203ENST00000536218 KCNK17Q96T54 332 aa12.12□□□□□ -0.47
LIG1-203ENST00000536218 ALKBH4Q9NXW9 302 aa12.12□□□□□ -0.47
LIG1-203ENST00000536218 NXT1Q9UKK6 140 aaKnown RBP12.12□□□□□ -0.47
LIG1-203ENST00000536218 IGHV3-15A0A0B4J1V0 119 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 KIR2DL5BA0A0G2JN68 375 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 KIR2DL5BA0A0G2JPC4 375 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 LNP1A1A4G5 178 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 SLC33A1O00400 549 aaPredicted RBP12.11□□□□□ -0.47
LIG1-203ENST00000536218 ITGB1BP1O14713 200 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 TRAPPC6AO75865 159 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 NXPH2O95156 264 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 HSPB1P04792 205 aaKnown RBP12.11□□□□□ -0.47
LIG1-203ENST00000536218 CLRN1P58418 232 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 GABREP78334 506 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 ZNF468Q5VIY5 522 aaPredicted RBP12.11□□□□□ -0.47
LIG1-203ENST00000536218 ABLIM2Q6H8Q1 611 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 DNM1P34Q6PK57 102 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 KIR2DL5AQ8N109 375 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 C11orf40Q8WZ69 217 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 WDR54Q9H977 334 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 B3GAT1Q9P2W7 334 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 ZFP30Q9Y2G7 519 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 TRBV24-1A0A075B6N3 115 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 ONECUT2O95948 504 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 IL6RP08887 468 aaPredicted RBP12.11□□□□□ -0.47
LIG1-203ENST00000536218 H2BFMP0C1H6 154 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 TCN2P20062 427 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 OR10J1P30954 320 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 MPLP40238 635 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 FOLR3P41439 243 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 SNU13P55769 128 aaKnown RBP12.11□□□□□ -0.47
LIG1-203ENST00000536218 TDRG1Q3Y452 100 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 VAX1Q5SQQ9 334 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 C1orf100Q5SVJ3 147 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 COL5A1-AS1Q5SY13 56 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 RAET1LQ5VY80 246 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 RPS19BP1Q86WX3 136 aaKnown RBP12.11□□□□□ -0.47
LIG1-203ENST00000536218 SULF2Q8IWU5 870 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 NOXO1Q8NFA2 376 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 IMMP1LQ96LU5 166 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 SRD5A3Q9H8P0 318 aa12.11□□□□□ -0.47
LIG1-203ENST00000536218 A0A1B0GU03 582 aa12.1□□□□□ -0.47
LIG1-203ENST00000536218 B4DEV8 164 aa12.1□□□□□ -0.47
LIG1-203ENST00000536218 ZNF878C9JN71 531 aa12.1□□□□□ -0.47
LIG1-203ENST00000536218 RAD51DO75771 328 aa12.1□□□□□ -0.47
LIG1-203ENST00000536218 IGHMP01871 453 aa12.1□□□□□ -0.47
LIG1-203ENST00000536218 CCKARP32238 428 aa12.1□□□□□ -0.47
LIG1-203ENST00000536218 ZP4Q12836 540 aa12.1□□□□□ -0.47
LIG1-203ENST00000536218 ADIRFQ15847 76 aa12.1□□□□□ -0.47
LIG1-203ENST00000536218 PLAC9Q5JTB6 97 aa12.1□□□□□ -0.47
LIG1-203ENST00000536218 OR2Y1Q8NGV0 311 aa12.1□□□□□ -0.47
LIG1-203ENST00000536218 MS4A10Q96PG2 267 aa12.1□□□□□ -0.47
LIG1-203ENST00000536218 TUBG2Q9NRH3 451 aa12.1□□□□□ -0.47
LIG1-203ENST00000536218 SLC5A6Q9Y289 635 aa12.1□□□□□ -0.47
LIG1-203ENST00000536218 A0A1W2PP11 408 aa12.1□□□□□ -0.47
LIG1-203ENST00000536218 RND2P52198 227 aa12.1□□□□□ -0.47
LIG1-203ENST00000536218 TLE1Q04724 770 aa12.1□□□□□ -0.47
LIG1-203ENST00000536218 RNF144BQ7Z419 303 aa12.1□□□□□ -0.47
LIG1-203ENST00000536218 IL22RA1Q8N6P7 574 aa12.1□□□□□ -0.47
LIG1-203ENST00000536218 EMG1Q92979 244 aaKnown RBP12.1□□□□□ -0.47
LIG1-203ENST00000536218 PTX4Q96A99 478 aa12.1□□□□□ -0.47
LIG1-203ENST00000536218 ZNF205O95201 554 aa12.1□□□□□ -0.47
LIG1-203ENST00000536218 ZNF43P17038 809 aa12.1□□□□□ -0.47
LIG1-203ENST00000536218 MPV17LQ2QL34 196 aa12.1□□□□□ -0.47
LIG1-203ENST00000536218 CHRFAM7AQ494W8 412 aa12.1□□□□□ -0.47
LIG1-203ENST00000536218 PEAR1Q5VY43 1037 aaPredicted RBP12.1□□□□□ -0.47
LIG1-203ENST00000536218 ARHGAP5-AS1Q96IT6 56 aa12.1□□□□□ -0.47
LIG1-203ENST00000536218 ZNF701Q9NV72 531 aaPredicted RBP12.1□□□□□ -0.47
LIG1-203ENST00000536218 A0A1B0GUS0 222 aa12.09□□□□□ -0.47
LIG1-203ENST00000536218 CCL25O15444 150 aa12.09□□□□□ -0.47
LIG1-203ENST00000536218 SSR4P51571 173 aa12.09□□□□□ -0.47
LIG1-203ENST00000536218 RUNX1Q01196 453 aa12.09□□□□□ -0.47
LIG1-203ENST00000536218 FBXW12Q6X9E4 464 aa12.09□□□□□ -0.47
LIG1-203ENST00000536218 NUFIP2Q7Z417 695 aaKnown RBP12.09□□□□□ -0.47
LIG1-203ENST00000536218 GBGT1Q8N5D6 347 aa12.09□□□□□ -0.47
LIG1-203ENST00000536218 TOMM40LQ969M1 308 aa12.09□□□□□ -0.47
LIG1-203ENST00000536218 PCGF1Q9BSM1 259 aa12.09□□□□□ -0.47
LIG1-203ENST00000536218 PARD6GQ9BYG4 376 aaPredicted RBP12.09□□□□□ -0.47
LIG1-203ENST00000536218 TUBD1Q9UJT1 453 aa12.09□□□□□ -0.47
LIG1-203ENST00000536218 LOXL2Q9Y4K0 774 aa12.09□□□□□ -0.47
LIG1-203ENST00000536218 EP300Q09472 2414 aaPredicted RBP12.09□□□□□ -0.47
LIG1-203ENST00000536218 LOC102723996A0A087X1L8 192 aa12.09□□□□□ -0.47
LIG1-203ENST00000536218 FAM24AA6NFZ4 105 aa12.09□□□□□ -0.47
LIG1-203ENST00000536218 PRSS47A8MTI9 375 aa12.09□□□□□ -0.47
LIG1-203ENST00000536218 FSTP19883 344 aa12.09□□□□□ -0.47
LIG1-203ENST00000536218 ROM1Q03395 351 aa12.09□□□□□ -0.47
LIG1-203ENST00000536218 ZNF506Q5JVG8 444 aa12.09□□□□□ -0.47
LIG1-203ENST00000536218 DCAF12Q5T6F0 453 aa12.09□□□□□ -0.47
LIG1-203ENST00000536218 CATSPERDQ86XM0 798 aa12.09□□□□□ -0.47
LIG1-203ENST00000536218 NKAIN3Q8N8D7 197 aa12.09□□□□□ -0.47
LIG1-203ENST00000536218 FAM122AQ96E09 287 aa12.09□□□□□ -0.47
LIG1-203ENST00000536218 ALKBH3Q96Q83 286 aaPredicted RBP12.09□□□□□ -0.47
LIG1-203ENST00000536218 VPS25Q9BRG1 176 aa12.09□□□□□ -0.47
LIG1-203ENST00000536218 EXPH5Q8NEV8 1989 aa12.09□□□□□ -0.47
LIG1-203ENST00000536218 DKK1O94907 266 aa12.08□□□□□ -0.48
LIG1-203ENST00000536218 CDKN1BP46527 198 aa12.08□□□□□ -0.48
LIG1-203ENST00000536218 CARD18P57730 90 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms