RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 ELP2Q6IA86 826 aa10.57□□□□□ -0.72
CLSTN3-205ENST00000535452 SLC35E3Q7Z769 313 aa10.57□□□□□ -0.72
CLSTN3-205ENST00000535452 MOB3BQ86TA1 216 aa10.57□□□□□ -0.72
CLSTN3-205ENST00000535452 CBR4Q8N4T8 237 aa10.57□□□□□ -0.72
CLSTN3-205ENST00000535452 MRGPRDQ8TDS7 321 aa10.57□□□□□ -0.72
CLSTN3-205ENST00000535452 KIRREL1Q96J84 757 aa10.57□□□□□ -0.72
CLSTN3-205ENST00000535452 SPACA1Q9HBV2 294 aa10.57□□□□□ -0.72
CLSTN3-205ENST00000535452 KIF25Q9UIL4 384 aa10.57□□□□□ -0.72
CLSTN3-205ENST00000535452 PLXNB1O43157 2135 aa10.57□□□□□ -0.72
CLSTN3-205ENST00000535452 CCRL2O00421 344 aa10.56□□□□□ -0.72
CLSTN3-205ENST00000535452 TXNL1O43396 289 aa10.56□□□□□ -0.72
CLSTN3-205ENST00000535452 ZFPL1O95159 310 aa10.56□□□□□ -0.72
CLSTN3-205ENST00000535452 ZNF93P35789 620 aaPredicted RBP10.56□□□□□ -0.72
CLSTN3-205ENST00000535452 RAB25P57735 213 aa10.56□□□□□ -0.72
CLSTN3-205ENST00000535452 HNF4GQ14541 408 aa10.56□□□□□ -0.72
CLSTN3-205ENST00000535452 CCDC58Q4VC31 144 aa10.56□□□□□ -0.72
CLSTN3-205ENST00000535452 Q6P435 159 aa10.56□□□□□ -0.72
CLSTN3-205ENST00000535452 RPL22L1Q6P5R6 122 aaKnown RBP10.56□□□□□ -0.72
CLSTN3-205ENST00000535452 Q6ZS46 218 aa10.56□□□□□ -0.72
CLSTN3-205ENST00000535452 DRAM1Q8N682 238 aa10.56□□□□□ -0.72
CLSTN3-205ENST00000535452 OR51A2Q8NGJ7 313 aa10.56□□□□□ -0.72
CLSTN3-205ENST00000535452 OR10AC1Q8NH08 325 aa10.56□□□□□ -0.72
CLSTN3-205ENST00000535452 COQ2Q96H96 371 aa10.56□□□□□ -0.72
CLSTN3-205ENST00000535452 PDCD1LG2Q9BQ51 273 aa10.56□□□□□ -0.72
CLSTN3-205ENST00000535452 DPCDQ9BVM2 203 aaPredicted RBP10.56□□□□□ -0.72
CLSTN3-205ENST00000535452 PPIL3Q9H2H8 161 aaKnown RBP10.56□□□□□ -0.72
CLSTN3-205ENST00000535452 TMEM138Q9NPI0 162 aa10.56□□□□□ -0.72
CLSTN3-205ENST00000535452 ERVK13-1Q9NX77 482 aa10.56□□□□□ -0.72
CLSTN3-205ENST00000535452 ST3GAL6Q9Y274 331 aa10.56□□□□□ -0.72
CLSTN3-205ENST00000535452 ADARB2-AS1A8MUL3 147 aa10.55□□□□□ -0.72
CLSTN3-205ENST00000535452 HSD17B6O14756 317 aa10.55□□□□□ -0.72
CLSTN3-205ENST00000535452 SPINT2O43291 252 aa10.55□□□□□ -0.72
CLSTN3-205ENST00000535452 IGKV1D-33P01593 117 aa10.55□□□□□ -0.72
CLSTN3-205ENST00000535452 IGKV1-33P01594 117 aa10.55□□□□□ -0.72
CLSTN3-205ENST00000535452 GTF2F2P13984 249 aa10.55□□□□□ -0.72
CLSTN3-205ENST00000535452 BDKRB2P30411 391 aa10.55□□□□□ -0.72
CLSTN3-205ENST00000535452 ZP1P60852 638 aa10.55□□□□□ -0.72
CLSTN3-205ENST00000535452 MPV17LQ2QL34 196 aa10.55□□□□□ -0.72
CLSTN3-205ENST00000535452 CXorf66Q5JRM2 361 aaPredicted RBP10.55□□□□□ -0.72
CLSTN3-205ENST00000535452 VAX1Q5SQQ9 334 aa10.55□□□□□ -0.72
CLSTN3-205ENST00000535452 DDI2Q5TDH0 399 aa10.55□□□□□ -0.72
CLSTN3-205ENST00000535452 TEX38Q6PEX7 206 aa10.55□□□□□ -0.72
CLSTN3-205ENST00000535452 KLHL30-AS1Q8NEE0 82 aa10.55□□□□□ -0.72
CLSTN3-205ENST00000535452 OR2T10Q8NGZ9 312 aa10.55□□□□□ -0.72
CLSTN3-205ENST00000535452 RFESDQ8TAC1 157 aa10.55□□□□□ -0.72
CLSTN3-205ENST00000535452 WIPF2Q8TF74 440 aaPredicted RBP10.55□□□□□ -0.72
CLSTN3-205ENST00000535452 TMEM106AQ96A25 262 aa10.55□□□□□ -0.72
CLSTN3-205ENST00000535452 RASL11BQ9BPW5 248 aa10.55□□□□□ -0.72
CLSTN3-205ENST00000535452 AMBNQ9NP70 447 aa10.55□□□□□ -0.72
CLSTN3-205ENST00000535452 PSG11Q9UQ72 335 aa10.55□□□□□ -0.72
CLSTN3-205ENST00000535452 LOC100130705A0A1B0GUX0 176 aa10.54□□□□□ -0.72
CLSTN3-205ENST00000535452 MCRIP1C9JLW8 97 aa10.54□□□□□ -0.72
CLSTN3-205ENST00000535452 J3QRE1 110 aa10.54□□□□□ -0.72
CLSTN3-205ENST00000535452 AP4M1O00189 453 aa10.54□□□□□ -0.72
CLSTN3-205ENST00000535452 SDCBPO00560 298 aaPredicted RBP10.54□□□□□ -0.72
CLSTN3-205ENST00000535452 GABRPO00591 440 aa10.54□□□□□ -0.72
CLSTN3-205ENST00000535452 IGHV3-7P01780 117 aa10.54□□□□□ -0.72
CLSTN3-205ENST00000535452 SERPINA2P20848 420 aa10.54□□□□□ -0.72
CLSTN3-205ENST00000535452 VDAC1P21796 283 aa10.54□□□□□ -0.72
CLSTN3-205ENST00000535452 DCKP27707 260 aa10.54□□□□□ -0.72
CLSTN3-205ENST00000535452 MYCNOSP40205 109 aa10.54□□□□□ -0.72
CLSTN3-205ENST00000535452 RPL23AP62750 156 aaKnown RBP10.54□□□□□ -0.72
CLSTN3-205ENST00000535452 RIPK1Q13546 671 aa10.54□□□□□ -0.72
CLSTN3-205ENST00000535452 C17orf58Q2M2W7 97 aa10.54□□□□□ -0.72
CLSTN3-205ENST00000535452 TMEM30BQ3MIR4 351 aa10.54□□□□□ -0.72
CLSTN3-205ENST00000535452 C6orf183Q5T699 404 aa10.54□□□□□ -0.72
CLSTN3-205ENST00000535452 TRAT1Q6PIZ9 186 aa10.54□□□□□ -0.72
CLSTN3-205ENST00000535452 BAIAP2L2Q6UXY1 529 aa10.54□□□□□ -0.72
CLSTN3-205ENST00000535452 ZNF329Q86UD4 541 aa10.54□□□□□ -0.72
CLSTN3-205ENST00000535452 OR13A1Q8NGR1 328 aa10.54□□□□□ -0.72
CLSTN3-205ENST00000535452 OR52N1Q8NH53 320 aa10.54□□□□□ -0.72
CLSTN3-205ENST00000535452 ISG20L2Q9H9L3 353 aaKnown RBP10.54□□□□□ -0.72
CLSTN3-205ENST00000535452 TAS2R4Q9NYW5 299 aa10.54□□□□□ -0.72
CLSTN3-205ENST00000535452 GNG12Q9UBI6 72 aa10.54□□□□□ -0.72
CLSTN3-205ENST00000535452 TRAPPC2LQ9UL33 140 aa10.54□□□□□ -0.72
CLSTN3-205ENST00000535452 SH2D7A6NKC9 451 aaPredicted RBP10.53□□□□□ -0.72
CLSTN3-205ENST00000535452 AIPO00170 330 aa10.53□□□□□ -0.72
CLSTN3-205ENST00000535452 OR5H8P0DN80 308 aa10.53□□□□□ -0.72
CLSTN3-205ENST00000535452 GDNFP39905 211 aa10.53□□□□□ -0.72
CLSTN3-205ENST00000535452 CDK5R1Q15078 307 aa10.53□□□□□ -0.72
CLSTN3-205ENST00000535452 PIGYQ3MUY2 71 aa10.53□□□□□ -0.72
CLSTN3-205ENST00000535452 ZNF695Q8IW36 515 aa10.53□□□□□ -0.72
CLSTN3-205ENST00000535452 SUMF2Q8NBJ7 301 aa10.53□□□□□ -0.72
CLSTN3-205ENST00000535452 SETD9Q8NE22 299 aa10.53□□□□□ -0.72
CLSTN3-205ENST00000535452 OR8H1Q8NGG4 311 aa10.53□□□□□ -0.72
CLSTN3-205ENST00000535452 OR10K1Q8NGX5 313 aa10.53□□□□□ -0.72
CLSTN3-205ENST00000535452 THRSPQ92748 146 aa10.53□□□□□ -0.72
CLSTN3-205ENST00000535452 LEAP2Q969E1 77 aa10.53□□□□□ -0.72
CLSTN3-205ENST00000535452 ARL11Q969Q4 196 aa10.53□□□□□ -0.72
CLSTN3-205ENST00000535452 KCNIP1Q9NZI2 227 aa10.53□□□□□ -0.72
CLSTN3-205ENST00000535452 SIRT4Q9Y6E7 314 aaPredicted RBP10.53□□□□□ -0.72
CLSTN3-205ENST00000535452 TRAV24A0A0B4J272 114 aa10.52□□□□□ -0.73
CLSTN3-205ENST00000535452 LY6LH3BQJ8 138 aa10.52□□□□□ -0.73
CLSTN3-205ENST00000535452 BAG2O95816 211 aa10.52□□□□□ -0.73
CLSTN3-205ENST00000535452 SSTR5P35346 364 aa10.52□□□□□ -0.73
CLSTN3-205ENST00000535452 RBM11P57052 281 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-205ENST00000535452 PAX5Q02548 391 aa10.52□□□□□ -0.73
CLSTN3-205ENST00000535452 PNLIPRP3Q17RR3 467 aa10.52□□□□□ -0.73
CLSTN3-205ENST00000535452 SLC22A6Q4U2R8 563 aa10.52□□□□□ -0.73
CLSTN3-205ENST00000535452 RSBN1Q5VWQ0 802 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms