RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 OR52K1Q8NGK4 314 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 OR5J2Q8NH18 312 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 ITFG1Q8TB96 612 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 SPPL2BQ8TCT7 592 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 PATE1Q8WXA2 126 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 C22orf15Q8WYQ4 148 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 FGF13Q92913 245 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 C16orf45Q96MC5 204 aaPredicted RBP-0.53□□□□□ -2.49
COPB1-212ENST00000534771 OR2M4Q96R27 311 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 AMELYQ99218 206 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 UPK3BQ9BT76 320 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 GON7Q9BXV9 100 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 UCK2Q9BZX2 261 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 ALX4Q9H161 411 aaPredicted RBP-0.53□□□□□ -2.49
COPB1-212ENST00000534771 C16orf95Q9H693 158 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 SDHAF3Q9NRP4 125 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 MCUBQ9NWR8 336 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 WASHC3Q9Y3C0 194 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 OR51B2Q9Y5P1 312 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 EPPK1P58107 5090 aaKnown RBP-0.53□□□□□ -2.49
COPB1-212ENST00000534771 UBR5O95071 2799 aaPredicted RBP-0.53□□□□□ -2.49
COPB1-212ENST00000534771 STARD9Q9P2P6 4700 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 RTTNQ86VV8 2226 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 WDR90Q96KV7 1748 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 IGHV3-73A0A0B4J1V6 119 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 IGHV2OR16-5A0A0B4J2B6 119 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 LOC100653049A0A140TA62 436 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 EIF3HO15372 352 aaKnown RBP eCLIP-0.54□□□□□ -2.5
COPB1-212ENST00000534771 NOL3O60936 208 aaKnown RBP-0.54□□□□□ -2.5
COPB1-212ENST00000534771 KRT34O76011 436 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 MT-CO2P00403 227 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 FGF4P08620 206 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 SLC2A3P11169 496 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 GFAPP14136 432 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 SLC25A16P16260 332 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 PRKACAP17612 351 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 PRTN3P24158 256 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 GTF2E2P29084 291 aaKnown RBP-0.54□□□□□ -2.5
COPB1-212ENST00000534771 AKR1C2P52895 323 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 UBE2MP61081 183 aaKnown RBP-0.54□□□□□ -2.5
COPB1-212ENST00000534771 C2orf80Q0P641 193 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 BNIP2Q12982 314 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 GOLGA7BQ2TAP0 167 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 HSDL1Q3SXM5 330 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 KRTAP19-7Q3SYF9 63 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 LRRC23Q53EV4 343 aaPredicted RBP-0.54□□□□□ -2.5
COPB1-212ENST00000534771 SSX7Q7RTT5 188 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 GALNT10Q86SR1 603 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 UBE2J2Q8N2K1 259 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 GTF2H4Q92759 462 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 LINC00526Q96FQ7 95 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 REEP6Q96HR9 211 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 RILPQ96NA2 401 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 NAP1L5Q96NT1 182 aaPredicted RBP-0.54□□□□□ -2.5
COPB1-212ENST00000534771 MIEN1Q9BRT3 115 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 TMEM70Q9BUB7 260 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 SLC7A5P2Q9GIP4 190 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 OR51B5Q9H339 312 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 LIN28AQ9H9Z2 209 aaKnown RBP-0.54□□□□□ -2.5
COPB1-212ENST00000534771 PEF1Q9UBV8 284 aaKnown RBP-0.54□□□□□ -2.5
COPB1-212ENST00000534771 GLS2Q9UI32 602 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 PITPNC1Q9UKF7 332 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 TBC1D24Q9ULP9 559 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 FLVCR2Q9UPI3 526 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 HHLA3Q9XRX5 114 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 SAR1BQ9Y6B6 198 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 MTCH2Q9Y6C9 303 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 HEATR5BQ9P2D3 2071 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 ZNF638Q14966 1978 aaKnown RBP-0.54□□□□□ -2.5
COPB1-212ENST00000534771 PCDH15Q96QU1 1955 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 PTPRZ1P23471 2315 aaPredicted RBP-0.54□□□□□ -2.5
COPB1-212ENST00000534771 TEP1Q99973 2627 aaKnown RBP-0.54□□□□□ -2.5
COPB1-212ENST00000534771 OTOGQ6ZRI0 2925 aa-0.54□□□□□ -2.5
COPB1-212ENST00000534771 BRWD1Q9NSI6 2320 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 ALPK3Q96L96 1907 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 A0A087WX48 190 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 IGKV1-12A0A0C4DH73 117 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 XRCC2O43543 280 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 DNAJB6O75190 326 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 GUCA1CO95843 209 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 IGKV1D-12P01611 117 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 RLN2P04090 185 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 UBE2HP62256 183 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 IFFO1Q0D2I5 559 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 CDK10Q15131 360 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 MOGQ16653 247 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 Q1T7F1 81 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 PLPPR5Q32ZL2 321 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 LGALS9BQ3B8N2 356 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 KRTAP20-2Q3LI61 65 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 CDNFQ49AH0 187 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 CHCHD2P9Q5T1J5 151 aaPredicted RBP-0.55□□□□□ -2.5
COPB1-212ENST00000534771 DCXRQ7Z4W1 244 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 JAGN1Q8N5M9 183 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 C12orf29Q8N999 325 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 OR11H6Q8NGC7 330 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 OR56A4Q8NGH8 313 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 ANGPTL6Q8NI99 470 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 ZFAND1Q8TCF1 268 aa-0.55□□□□□ -2.5
COPB1-212ENST00000534771 CYGBQ8WWM9 190 aa-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms