RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 FAM192AQ9GZU8 254 aa4.06□□□□□ -1.76
USH1C-210ENST00000534556 SLITRK2Q9H156 845 aa4.06□□□□□ -1.76
USH1C-210ENST00000534556 IFT22Q9H7X7 185 aa4.06□□□□□ -1.76
USH1C-210ENST00000534556 SERTAD4Q9NUC0 356 aa4.06□□□□□ -1.76
USH1C-210ENST00000534556 TAS2R3Q9NYW6 316 aa4.06□□□□□ -1.76
USH1C-210ENST00000534556 CALYQ9NYX4 217 aa4.06□□□□□ -1.76
USH1C-210ENST00000534556 RCC2Q9P258 522 aaKnown RBP4.06□□□□□ -1.76
USH1C-210ENST00000534556 MRPS28Q9Y2Q9 187 aaKnown RBP4.06□□□□□ -1.76
USH1C-210ENST00000534556 UBE2J1Q9Y385 318 aaPredicted RBP4.06□□□□□ -1.76
USH1C-210ENST00000534556 RNF114Q9Y508 228 aa4.06□□□□□ -1.76
USH1C-210ENST00000534556 HILPDAQ9Y5L2 63 aa4.06□□□□□ -1.76
USH1C-210ENST00000534556 DNAH9Q9NYC9 4486 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 MEIKINA0A087WXM9 373 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 TRGV10A0A0A0MS01 117 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 IGHV3-43A0A0B4J1X8 118 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 KBTBD11-OT1A0A1B0GTJ5 212 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 A0A1W2PPI3 338 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 FAM90A18PA6NE21 464 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 FAM90A16PA6NEW6 464 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 FAM90A20PA6NIJ5 464 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 ZNF729A6NN14 1252 aaPredicted RBP4.05□□□□□ -1.76
USH1C-210ENST00000534556 FAM90A9PA6NNJ1 464 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 FOXI3A8MTJ6 420 aaPredicted RBP4.05□□□□□ -1.76
USH1C-210ENST00000534556 ADARB2-AS1A8MUL3 147 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 FAM90A12PA8MX19 464 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 FAM90A5PA8MXJ8 464 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 MYL12BO14950 172 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 KCNAB3O43448 404 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 PAHP00439 452 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 MT-ND4P03905 459 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 CD2P06729 351 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 FAM90A15PP0C7V4 464 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 FAM90A13PP0C7W8 464 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 FAM90A14PP0C7W9 464 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 FAM90A24PP0C7X0 464 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 OCMP0CE72 109 aaPredicted RBP4.05□□□□□ -1.76
USH1C-210ENST00000534556 IGHV3-43DP0DP04 118 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 VSIG8P0DPA2 414 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 SNRPBP14678 240 aaKnown RBP4.05□□□□□ -1.76
USH1C-210ENST00000534556 CPEP16870 476 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 RCC1P18754 421 aaPredicted RBP4.05□□□□□ -1.76
USH1C-210ENST00000534556 HTR2CP28335 458 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 GLP1RP43220 463 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 KIR2DS4P43632 304 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 ZNF134P52741 427 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 LOXL3P58215 753 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 BDH1Q02338 343 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 DYNC1I2Q13409 638 aaKnown RBP4.05□□□□□ -1.76
USH1C-210ENST00000534556 MED22Q15528 200 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 AANATQ16613 207 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 LTC4SQ16873 150 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 PRR31Q5SQ13 230 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 DHRS7BQ6IAN0 325 aaPredicted RBP4.05□□□□□ -1.76
USH1C-210ENST00000534556 SHISA2Q6UWI4 295 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 PRSS48Q7RTY5 328 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 CEACAM19Q7Z692 300 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 TRAPPC6BQ86SZ2 158 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 NR2C2APQ86WQ0 139 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 ABHD12Q8N2K0 398 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 JAGN1Q8N5M9 183 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 C11orf44Q8N8P7 122 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 CHST4Q8NCG5 386 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 ZNF439Q8NDP4 499 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 OR13D1Q8NGV5 346 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 OR4F5Q8NH21 305 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 OR4K15Q8NH41 348 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 OR1L1Q8NH94 360 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 HAVCR2Q8TDQ0 301 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 FAM46BQ96A09 425 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 MALSU1Q96EH3 234 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 SULT4A1Q9BR01 284 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 OCSTAMPQ9BR26 566 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 NICN1Q9BSH3 213 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 DPCDQ9BVM2 203 aaPredicted RBP4.05□□□□□ -1.76
USH1C-210ENST00000534556 MND1Q9BWT6 205 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 CLEC7AQ9BXN2 247 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 METTL9Q9H1A3 318 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 DPAGT1Q9H3H5 408 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 ZNF696Q9H7X3 374 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 RHOFQ9HBH0 211 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 BEX1Q9HBH7 125 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 IDI2-AS1Q9NZ38 188 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 PSG11Q9UQ72 335 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 TCF19Q9Y242 345 aa4.05□□□□□ -1.76
USH1C-210ENST00000534556 AK6Q9Y3D8 172 aaKnown RBP4.05□□□□□ -1.76
USH1C-210ENST00000534556 TBL2Q9Y4P3 447 aaKnown RBP4.05□□□□□ -1.76
USH1C-210ENST00000534556 A0A0B4J203 849 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 UBE2QL1A1L167 161 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 LINC01548A6NM66 108 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 TMEM14DPA8MWL7 114 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 ZNF736B4DX44 427 aaPredicted RBP4.04□□□□□ -1.76
USH1C-210ENST00000534556 C12orf77C9JDV5 145 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 BUB1B-PAK6H3BSN5 160 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 J3QR06 171 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 LDLRAD4O15165 306 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 SLC22A1O15245 554 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 SOCS1O15524 211 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 WIPF1O43516 503 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 RGS10O43665 173 aa4.04□□□□□ -1.76
USH1C-210ENST00000534556 OR7C1O76099 320 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms