RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	CSDC2	Q9Y534	153 aa	Known RBP	3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442		A0A0A6YYD5	115 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	OR5B21	A6NL26	309 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	ZFP92	A6NM28	416 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	PLPP1	O14494	284 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	PHYH	O14832	338 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	VAPB	O95292	243 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	TMEM50A	O95807	157 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	CRYGB	P07316	175 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	MT1HL1	P0DM35	61 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	OGN	P20774	298 aa	Known RBP	3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	ATP6V1B2	P21281	511 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	KITLG	P21583	273 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	SLC6A1	P30531	599 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	SERPINB1	P30740	379 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	GSS	P48637	474 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	SH3BGR	P55822	239 aa	Predicted RBP	3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	PLP1	P60201	277 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	CRADD	P78560	199 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	SCRN3	Q0VDG4	424 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	ARHGAP11B	Q3KRB8	267 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	HSP90AA4P	Q58FG1	418 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	C3orf33	Q6P1S2	294 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	ZNF836	Q6ZNA1	936 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	UTS2B	Q765I0	119 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	GDPD3	Q7L5L3	318 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	ZNF571	Q7Z3V5	609 aa	Predicted RBP	3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	MDP1	Q86V88	176 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	VRK2	Q86Y07	508 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	NUDCD3	Q8IVD9	361 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	RDH10	Q8IZV5	341 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	TMEM252	Q8N6L7	170 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	ZNF283	Q8N7M2	679 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	TPRX1	Q8N7U7	411 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	OR4F6	Q8NGB9	312 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	OR8B3	Q8NGG8	313 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	KCNG3	Q8TAE7	436 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	C11orf40	Q8WZ69	217 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	AURKB	Q96GD4	344 aa	Predicted RBP	3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	OR8B2	Q96RD0	313 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	EFCAB11	Q9BUY7	163 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	FAIM2	Q9BWQ8	316 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	C20orf85	Q9H1P6	137 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	OR51B5	Q9H339	312 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	HAUS4	Q9H6D7	363 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	ISG20L2	Q9H9L3	353 aa	Known RBP	3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	SLC2A8	Q9NY64	477 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442	TMCO1	Q9UM00	188 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442		V9GY05	133 aa		3.06	□□□□□ -1.92
ECHDC1-223	ENST00000534442		A6NIZ1	184 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	ERI2	A8K979	691 aa	Known RBP	3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442		E9PBE3	544 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	LOC110117498-PIK3R3	F6TDL0	507 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	APOC4-APOC2	K7ER74	178 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	NPFF	O15130	113 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	ZNF189	O75820	626 aa	Predicted RBP	3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	OR7A10	O76100	309 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	H6PD	O95479	791 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	APOC2	P02655	101 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	IL12A	P29459	219 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	SLC1A1	P43005	524 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	CRAT	P43155	626 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	INSL3	P51460	131 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	GPX6	P59796	221 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	RAP1B	P61224	184 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	MRPL28	Q13084	256 aa	Known RBP	3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	MICB	Q29980	383 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	LRRC75B	Q2VPJ9	315 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	SAMD4B	Q5PRF9	694 aa	Known RBP	3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	C1orf94	Q6P1W5	598 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	RNASEK	Q6P5S7	137 aa	Known RBP	3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	METAP1D	Q6UB28	335 aa	Predicted RBP	3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	AAED1	Q7RTV5	226 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	OR2W3	Q7Z3T1	314 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	GATS	Q8NAP1	163 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	OR7G2	Q8NG99	324 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	C7orf33	Q8WU49	177 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	GEMIN6	Q8WXD5	167 aa	Known RBP	3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	MBOAT4	Q96T53	435 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	ARHGDIG	Q99819	225 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	SELENOI	Q9C0D9	397 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	RNF167	Q9H6Y7	350 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	TUBA4B	Q9H853	241 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	TAS2R9	Q9NYW1	312 aa		3.05	□□□□□ -1.92
ECHDC1-223	ENST00000534442	IGHV3OR16-13	A0A075B7E8	117 aa		3.04	□□□□□ -1.92
ECHDC1-223	ENST00000534442		A0A1B0GVI7	797 aa		3.04	□□□□□ -1.92
ECHDC1-223	ENST00000534442	IGLL5	B9A064	214 aa		3.04	□□□□□ -1.92
ECHDC1-223	ENST00000534442	ZNF780A	O75290	641 aa	Predicted RBP	3.04	□□□□□ -1.92
ECHDC1-223	ENST00000534442	HPGD	P15428	266 aa		3.04	□□□□□ -1.92
ECHDC1-223	ENST00000534442	GPM6A	P51674	278 aa		3.04	□□□□□ -1.92
ECHDC1-223	ENST00000534442	GLO1	Q04760	184 aa		3.04	□□□□□ -1.92
ECHDC1-223	ENST00000534442	GNMT	Q14749	295 aa		3.04	□□□□□ -1.92
ECHDC1-223	ENST00000534442	C1orf146	Q5VVC0	180 aa		3.04	□□□□□ -1.92
ECHDC1-223	ENST00000534442	SLC48A1	Q6P1K1	146 aa		3.04	□□□□□ -1.92
ECHDC1-223	ENST00000534442	TMEM107	Q6UX40	140 aa		3.04	□□□□□ -1.92
ECHDC1-223	ENST00000534442	C19orf35	Q6ZS72	473 aa		3.04	□□□□□ -1.92
ECHDC1-223	ENST00000534442	SLC25A48	Q6ZT89	311 aa	Known RBP	3.04	□□□□□ -1.92
ECHDC1-223	ENST00000534442	ZNF767P	Q75MW2	155 aa		3.04	□□□□□ -1.92
ECHDC1-223	ENST00000534442	NKAPP1	Q8N9T2	125 aa		3.04	□□□□□ -1.92

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