RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 RALGAPA1Q6GYQ0 2036 aa16.6■□□□□ 0.25
SMPD1-210ENST00000534405 FAM221AA4D161 298 aa16.59■□□□□ 0.25
SMPD1-210ENST00000534405 NPIPB13A6NJU9 1138 aa16.59■□□□□ 0.25
SMPD1-210ENST00000534405 NPIPB4C9JG80 1138 aa16.59■□□□□ 0.25
SMPD1-210ENST00000534405 ANOS1P23352 680 aa16.59■□□□□ 0.25
SMPD1-210ENST00000534405 ECI1P42126 302 aa16.59■□□□□ 0.25
SMPD1-210ENST00000534405 UBE2V1Q13404 147 aa16.59■□□□□ 0.25
SMPD1-210ENST00000534405 OR51G1Q8NGK1 321 aa16.59■□□□□ 0.25
SMPD1-210ENST00000534405 OR1L6Q8NGR2 347 aa16.59■□□□□ 0.25
SMPD1-210ENST00000534405 DDIT4LQ96D03 193 aa16.59■□□□□ 0.25
SMPD1-210ENST00000534405 CISD1Q9NZ45 108 aaKnown RBP16.59■□□□□ 0.25
SMPD1-210ENST00000534405 FUT9Q9Y231 359 aa16.59■□□□□ 0.25
SMPD1-210ENST00000534405 SLC5A6Q9Y289 635 aa16.59■□□□□ 0.25
SMPD1-210ENST00000534405 CFAP54Q96N23 3096 aa16.59■□□□□ 0.25
SMPD1-210ENST00000534405 MMP9P14780 707 aa16.59■□□□□ 0.25
SMPD1-210ENST00000534405 SHBQ15464 509 aa16.59■□□□□ 0.25
SMPD1-210ENST00000534405 TMEM183BQ1AE95 376 aa16.59■□□□□ 0.25
SMPD1-210ENST00000534405 C17orf78Q8N4C9 275 aa16.59■□□□□ 0.25
SMPD1-210ENST00000534405 TECTBQ96PL2 329 aa16.59■□□□□ 0.25
SMPD1-210ENST00000534405 KLHL13Q9P2N7 655 aa16.59■□□□□ 0.25
SMPD1-210ENST00000534405 TRAV39A0A0B4J263 110 aa16.58■□□□□ 0.25
SMPD1-210ENST00000534405 ZNF732B4DXR9 585 aa16.58■□□□□ 0.25
SMPD1-210ENST00000534405 SOCS1O15524 211 aa16.58■□□□□ 0.25
SMPD1-210ENST00000534405 TOMM40O96008 361 aa16.58■□□□□ 0.25
SMPD1-210ENST00000534405 CTSDP07339 412 aaPredicted RBP16.58■□□□□ 0.25
SMPD1-210ENST00000534405 SFTPDP35247 375 aa16.58■□□□□ 0.25
SMPD1-210ENST00000534405 MFAP5Q13361 173 aa16.58■□□□□ 0.25
SMPD1-210ENST00000534405 ENDOGQ14249 297 aaKnown RBP16.58■□□□□ 0.25
SMPD1-210ENST00000534405 SLC25A24Q6NUK1 477 aa16.58■□□□□ 0.25
SMPD1-210ENST00000534405 DPPA3Q6W0C5 159 aa16.58■□□□□ 0.25
SMPD1-210ENST00000534405 RNF138Q8WVD3 245 aa16.58■□□□□ 0.25
SMPD1-210ENST00000534405 BOD1Q96IK1 185 aa16.58■□□□□ 0.25
SMPD1-210ENST00000534405 PARD6GQ9BYG4 376 aaPredicted RBP16.58■□□□□ 0.25
SMPD1-210ENST00000534405 PBOV1Q9GZY1 135 aa16.58■□□□□ 0.25
SMPD1-210ENST00000534405 KLRF1Q9NZS2 232 aa16.58■□□□□ 0.25
SMPD1-210ENST00000534405 RNF150Q9ULK6 438 aa16.58■□□□□ 0.25
SMPD1-210ENST00000534405 LOC105371242A0A075B767 164 aa16.58■□□□□ 0.24
SMPD1-210ENST00000534405 TRAV1-1A0A0B4J248 108 aa16.58■□□□□ 0.24
SMPD1-210ENST00000534405 VSTM2BA6NLU5 285 aa16.58■□□□□ 0.24
SMPD1-210ENST00000534405 PITX3O75364 302 aa16.58■□□□□ 0.24
SMPD1-210ENST00000534405 PTGDSP41222 190 aa16.58■□□□□ 0.24
SMPD1-210ENST00000534405 CNN1P51911 297 aaKnown RBP16.58■□□□□ 0.24
SMPD1-210ENST00000534405 SUMO3P55854 103 aaPredicted RBP16.58■□□□□ 0.24
SMPD1-210ENST00000534405 ERVS71-1P61550 626 aa16.58■□□□□ 0.24
SMPD1-210ENST00000534405 CSNK2A1P68400 391 aaPredicted RBP16.58■□□□□ 0.24
SMPD1-210ENST00000534405 MYBPHQ13203 477 aa16.58■□□□□ 0.24
SMPD1-210ENST00000534405 RNF151Q2KHN1 245 aa16.58■□□□□ 0.24
SMPD1-210ENST00000534405 C16orf82Q7Z2V1 217 aa16.58■□□□□ 0.24
SMPD1-210ENST00000534405 CENPVQ7Z7K6 275 aaPredicted RBP16.58■□□□□ 0.24
SMPD1-210ENST00000534405 LRP11Q86VZ4 500 aa16.58■□□□□ 0.24
SMPD1-210ENST00000534405 CSNK2A3Q8NEV1 391 aa16.58■□□□□ 0.24
SMPD1-210ENST00000534405 KCNE4Q8WWG9 221 aa16.58■□□□□ 0.24
SMPD1-210ENST00000534405 MRPL13Q9BYD1 178 aaKnown RBP16.58■□□□□ 0.24
SMPD1-210ENST00000534405 ALKBH4Q9NXW9 302 aa16.58■□□□□ 0.24
SMPD1-210ENST00000534405 ADAMTS9Q9P2N4 1935 aa16.57■□□□□ 0.24
SMPD1-210ENST00000534405 ST8SIA3O43173 380 aa16.57■□□□□ 0.24
SMPD1-210ENST00000534405 TMEM50BP56557 158 aa16.57■□□□□ 0.24
SMPD1-210ENST00000534405 TDRG1Q3Y452 100 aa16.57■□□□□ 0.24
SMPD1-210ENST00000534405 SULF2Q8IWU5 870 aa16.57■□□□□ 0.24
SMPD1-210ENST00000534405 OR6C1Q96RD1 312 aa16.57■□□□□ 0.24
SMPD1-210ENST00000534405 Q9N2K0 584 aa16.57■□□□□ 0.24
SMPD1-210ENST00000534405 A0A0U1RQV5 110 aa16.57■□□□□ 0.24
SMPD1-210ENST00000534405 ZNF814B7Z6K7 855 aa16.57■□□□□ 0.24
SMPD1-210ENST00000534405 DBHP09172 617 aa16.57■□□□□ 0.24
SMPD1-210ENST00000534405 TUBG1P23258 451 aa16.57■□□□□ 0.24
SMPD1-210ENST00000534405 ASCL1P50553 236 aa16.57■□□□□ 0.24
SMPD1-210ENST00000534405 PLPPR5Q32ZL2 321 aa16.57■□□□□ 0.24
SMPD1-210ENST00000534405 RTL6Q6ICC9 239 aa16.57■□□□□ 0.24
SMPD1-210ENST00000534405 TOMM20LQ6UXN7 152 aa16.57■□□□□ 0.24
SMPD1-210ENST00000534405 OR10G3Q8NGC4 313 aa16.57■□□□□ 0.24
SMPD1-210ENST00000534405 MOB3AQ96BX8 217 aa16.57■□□□□ 0.24
SMPD1-210ENST00000534405 CYYR1Q96J86 154 aa16.57■□□□□ 0.24
SMPD1-210ENST00000534405 ELL3Q9HB65 397 aaPredicted RBP16.57■□□□□ 0.24
SMPD1-210ENST00000534405 WDR87Q6ZQQ6 2873 aa16.56■□□□□ 0.24
SMPD1-210ENST00000534405 CDAP32320 146 aa16.56■□□□□ 0.24
SMPD1-210ENST00000534405 ZNF41P51814 821 aaPredicted RBP16.56■□□□□ 0.24
SMPD1-210ENST00000534405 SNU13P55769 128 aaKnown RBP16.56■□□□□ 0.24
SMPD1-210ENST00000534405 UCP3P55916 312 aa16.56■□□□□ 0.24
SMPD1-210ENST00000534405 TPTE2P1Q5T6R2 138 aa16.56■□□□□ 0.24
SMPD1-210ENST00000534405 FAM69BQ5VUD6 431 aa16.56■□□□□ 0.24
SMPD1-210ENST00000534405 TDHQ8IZJ6 230 aa16.56■□□□□ 0.24
SMPD1-210ENST00000534405 IL22RA1Q8N6P7 574 aa16.56■□□□□ 0.24
SMPD1-210ENST00000534405 SPACA5Q96QH8 159 aa16.56■□□□□ 0.24
SMPD1-210ENST00000534405 ZNF581Q9P0T4 197 aa16.56■□□□□ 0.24
SMPD1-210ENST00000534405 LHFPL6Q9Y693 200 aa16.56■□□□□ 0.24
SMPD1-210ENST00000534405 WDFY3Q8IZQ1 3526 aa16.56■□□□□ 0.24
SMPD1-210ENST00000534405 TYMSP04818 313 aa16.56■□□□□ 0.24
SMPD1-210ENST00000534405 ZNF92Q03936 586 aa16.56■□□□□ 0.24
SMPD1-210ENST00000534405 TMEM123Q8N131 208 aa16.56■□□□□ 0.24
SMPD1-210ENST00000534405 GNPNAT1Q96EK6 184 aaPredicted RBP16.56■□□□□ 0.24
SMPD1-210ENST00000534405 PCGF1Q9BSM1 259 aa16.56■□□□□ 0.24
SMPD1-210ENST00000534405 ST6GALNAC5Q9BVH7 336 aa16.56■□□□□ 0.24
SMPD1-210ENST00000534405 OR6C3Q9NZP0 311 aa16.56■□□□□ 0.24
SMPD1-210ENST00000534405 RNF115Q9Y4L5 304 aa16.56■□□□□ 0.24
SMPD1-210ENST00000534405 A0A1W2PNR3 127 aa16.55■□□□□ 0.24
SMPD1-210ENST00000534405 A0A1W2PNV4 684 aa16.55■□□□□ 0.24
SMPD1-210ENST00000534405 GALR1P47211 349 aa16.55■□□□□ 0.24
SMPD1-210ENST00000534405 LINC01551Q86U37 167 aa16.55■□□□□ 0.24
SMPD1-210ENST00000534405 CISD2Q8N5K1 135 aaKnown RBP16.55■□□□□ 0.24
SMPD1-210ENST00000534405 OR51E1Q8TCB6 317 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms