RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 SLC22A6Q4U2R8 563 aa8.38□□□□□ -1.07
CAPN1-225ENST00000533704 YIF1BQ5BJH7 314 aa8.38□□□□□ -1.07
CAPN1-225ENST00000533704 TPTE2P1Q5T6R2 138 aa8.38□□□□□ -1.07
CAPN1-225ENST00000533704 OGFRL1Q5TC84 451 aaPredicted RBP8.38□□□□□ -1.07
CAPN1-225ENST00000533704 Q6ZS46 218 aa8.38□□□□□ -1.07
CAPN1-225ENST00000533704 ZNF565Q8N9K5 539 aa8.38□□□□□ -1.07
CAPN1-225ENST00000533704 SUMF2Q8NBJ7 301 aa8.38□□□□□ -1.07
CAPN1-225ENST00000533704 MUL1Q969V5 352 aa8.38□□□□□ -1.07
CAPN1-225ENST00000533704 KIRREL1Q96J84 757 aa8.38□□□□□ -1.07
CAPN1-225ENST00000533704 OR14A2Q96R54 314 aa8.38□□□□□ -1.07
CAPN1-225ENST00000533704 VCXQ9H320 206 aa8.38□□□□□ -1.07
CAPN1-225ENST00000533704 PAK1IP1Q9NWT1 392 aaPredicted RBP8.38□□□□□ -1.07
CAPN1-225ENST00000533704 IDI2-AS1Q9NZ38 188 aa8.38□□□□□ -1.07
CAPN1-225ENST00000533704 HSPE1-MOB4S4R3N1 261 aa8.38□□□□□ -1.07
CAPN1-225ENST00000533704 TRAV8-7A0A075B6U6 113 aa8.37□□□□□ -1.07
CAPN1-225ENST00000533704 SH2D7A6NKC9 451 aaPredicted RBP8.37□□□□□ -1.07
CAPN1-225ENST00000533704 BUB1B-PAK6H3BSN5 160 aa8.37□□□□□ -1.07
CAPN1-225ENST00000533704 GEMIN2O14893 280 aaKnown RBP8.37□□□□□ -1.07
CAPN1-225ENST00000533704 IL1AP01583 271 aa8.37□□□□□ -1.07
CAPN1-225ENST00000533704 IGLV1-47P01700 117 aa8.37□□□□□ -1.07
CAPN1-225ENST00000533704 MAS1P04201 325 aa8.37□□□□□ -1.07
CAPN1-225ENST00000533704 CELP19835 753 aa8.37□□□□□ -1.07
CAPN1-225ENST00000533704 SSTR5P35346 364 aa8.37□□□□□ -1.07
CAPN1-225ENST00000533704 MNDAP41218 407 aa8.37□□□□□ -1.07
CAPN1-225ENST00000533704 TAS2R43P59537 309 aa8.37□□□□□ -1.07
CAPN1-225ENST00000533704 PDLIM3Q53GG5 364 aaPredicted RBP8.37□□□□□ -1.07
CAPN1-225ENST00000533704 C9orf152Q5JTZ5 239 aa8.37□□□□□ -1.07
CAPN1-225ENST00000533704 RSBN1Q5VWQ0 802 aaPredicted RBP8.37□□□□□ -1.07
CAPN1-225ENST00000533704 LAIR2Q6ISS4 152 aa8.37□□□□□ -1.07
CAPN1-225ENST00000533704 ASCL4Q6XD76 172 aa8.37□□□□□ -1.07
CAPN1-225ENST00000533704 OR9G1Q8NH87 305 aa8.37□□□□□ -1.07
CAPN1-225ENST00000533704 UBALD1Q8TB05 177 aa8.37□□□□□ -1.07
CAPN1-225ENST00000533704 CCDC107Q8WV48 283 aa8.37□□□□□ -1.07
CAPN1-225ENST00000533704 CFHR4Q92496 578 aa8.37□□□□□ -1.07
CAPN1-225ENST00000533704 TOMM40LQ969M1 308 aa8.37□□□□□ -1.07
CAPN1-225ENST00000533704 RPEQ96AT9 228 aa8.37□□□□□ -1.07
CAPN1-225ENST00000533704 CREB3L1Q96BA8 519 aa8.37□□□□□ -1.07
CAPN1-225ENST00000533704 AKR1E2Q96JD6 320 aa8.37□□□□□ -1.07
CAPN1-225ENST00000533704 PGLYRP3Q96LB9 341 aa8.37□□□□□ -1.07
CAPN1-225ENST00000533704 SLC25A33Q9BSK2 321 aa8.37□□□□□ -1.07
CAPN1-225ENST00000533704 MMP28Q9H239 520 aa8.37□□□□□ -1.07
CAPN1-225ENST00000533704 PCDHB16Q9NRJ7 776 aa8.37□□□□□ -1.07
CAPN1-225ENST00000533704 IL36GQ9NZH8 169 aa8.37□□□□□ -1.07
CAPN1-225ENST00000533704 CNOT2Q9NZN8 540 aaKnown RBP8.37□□□□□ -1.07
CAPN1-225ENST00000533704 PSORS1C1Q9UIG5 152 aa8.37□□□□□ -1.07
CAPN1-225ENST00000533704 MRPS28Q9Y2Q9 187 aaKnown RBP8.37□□□□□ -1.07
CAPN1-225ENST00000533704 AMMECR1Q9Y4X0 333 aaPredicted RBP8.37□□□□□ -1.07
CAPN1-225ENST00000533704 A0A1W2PPE3 182 aa8.36□□□□□ -1.07
CAPN1-225ENST00000533704 A0A1W2PRX2 142 aa8.36□□□□□ -1.07
CAPN1-225ENST00000533704 TMEM30CPA0ZSE6 113 aa8.36□□□□□ -1.07
CAPN1-225ENST00000533704 FAM90A22PA8MWA6 464 aa8.36□□□□□ -1.07
CAPN1-225ENST00000533704 CASQ2O14958 399 aaPredicted RBP8.36□□□□□ -1.07
CAPN1-225ENST00000533704 GTF2F2P13984 249 aa8.36□□□□□ -1.07
CAPN1-225ENST00000533704 IGFBP3P17936 291 aaPredicted RBP8.36□□□□□ -1.07
CAPN1-225ENST00000533704 KCNJ3P48549 501 aa8.36□□□□□ -1.07
CAPN1-225ENST00000533704 WNT4P56705 351 aa8.36□□□□□ -1.07
CAPN1-225ENST00000533704 RPS11P62280 158 aaKnown RBP eCLIP8.36□□□□□ -1.07
CAPN1-225ENST00000533704 ABCA11PQ4W5N1 156 aa8.36□□□□□ -1.07
CAPN1-225ENST00000533704 FBLN7Q53RD9 439 aa8.36□□□□□ -1.07
CAPN1-225ENST00000533704 AWAT2Q6E213 333 aa8.36□□□□□ -1.07
CAPN1-225ENST00000533704 CCDC144NLQ6NUI1 221 aa8.36□□□□□ -1.07
CAPN1-225ENST00000533704 GLIPR1L1Q6UWM5 242 aa8.36□□□□□ -1.07
CAPN1-225ENST00000533704 Q8N2B8 174 aa8.36□□□□□ -1.07
CAPN1-225ENST00000533704 ZNF485Q8NCK3 441 aa8.36□□□□□ -1.07
CAPN1-225ENST00000533704 Q8NFD4 153 aa8.36□□□□□ -1.07
CAPN1-225ENST00000533704 OR10X1Q8NGY0 326 aa8.36□□□□□ -1.07
CAPN1-225ENST00000533704 CITED2Q99967 270 aaPredicted RBP8.36□□□□□ -1.07
CAPN1-225ENST00000533704 PSG11Q9UQ72 335 aa8.36□□□□□ -1.07
CAPN1-225ENST00000533704 TGP01266 2768 aa8.36□□□□□ -1.07
CAPN1-225ENST00000533704 CMYA5Q8N3K9 4069 aa8.35□□□□□ -1.07
CAPN1-225ENST00000533704 A0A087X0M5 115 aa8.35□□□□□ -1.07
CAPN1-225ENST00000533704 TRBV5-7A0A0A0MS05 114 aa8.35□□□□□ -1.07
CAPN1-225ENST00000533704 A0A1B0GX30 115 aa8.35□□□□□ -1.07
CAPN1-225ENST00000533704 PTGES3LE9PB15 166 aa8.35□□□□□ -1.07
CAPN1-225ENST00000533704 J3QR06 171 aa8.35□□□□□ -1.07
CAPN1-225ENST00000533704 ZNF780AO75290 641 aaPredicted RBP8.35□□□□□ -1.07
CAPN1-225ENST00000533704 LPLP06858 475 aa8.35□□□□□ -1.07
CAPN1-225ENST00000533704 CGB3P0DN86 165 aa8.35□□□□□ -1.07
CAPN1-225ENST00000533704 CGB7P0DN87 165 aa8.35□□□□□ -1.07
CAPN1-225ENST00000533704 FSTP19883 344 aa8.35□□□□□ -1.07
CAPN1-225ENST00000533704 DOC2BQ14184 412 aa8.35□□□□□ -1.07
CAPN1-225ENST00000533704 GPR176Q14439 515 aa8.35□□□□□ -1.07
CAPN1-225ENST00000533704 HES1Q14469 280 aa8.35□□□□□ -1.07
CAPN1-225ENST00000533704 MPV17LQ2QL34 196 aa8.35□□□□□ -1.07
CAPN1-225ENST00000533704 NHLRC3Q5JS37 347 aa8.35□□□□□ -1.07
CAPN1-225ENST00000533704 C16orf82Q7Z2V1 217 aa8.35□□□□□ -1.07
CAPN1-225ENST00000533704 CENPVQ7Z7K6 275 aaPredicted RBP8.35□□□□□ -1.07
CAPN1-225ENST00000533704 LINC00596Q86U02 117 aa8.35□□□□□ -1.07
CAPN1-225ENST00000533704 OR56B4Q8NH76 319 aa8.35□□□□□ -1.07
CAPN1-225ENST00000533704 ARL11Q969Q4 196 aa8.35□□□□□ -1.07
CAPN1-225ENST00000533704 R3HDM4Q96D70 268 aa8.35□□□□□ -1.07
CAPN1-225ENST00000533704 DERL3Q96Q80 235 aa8.35□□□□□ -1.07
CAPN1-225ENST00000533704 NCOR1P1Q9H4R4 102 aa8.35□□□□□ -1.07
CAPN1-225ENST00000533704 BANF2Q9H503 90 aa8.35□□□□□ -1.07
CAPN1-225ENST00000533704 LIN7BQ9HAP6 207 aa8.35□□□□□ -1.07
CAPN1-225ENST00000533704 NKX1-2Q9UD57 310 aaPredicted RBP8.35□□□□□ -1.07
CAPN1-225ENST00000533704 ERGIC3Q9Y282 383 aa8.35□□□□□ -1.07
CAPN1-225ENST00000533704 IGHV3-43A0A0B4J1X8 118 aa8.34□□□□□ -1.07
CAPN1-225ENST00000533704 OOSP1A8MZH6 123 aa8.34□□□□□ -1.07
CAPN1-225ENST00000533704 NPIPB11E5RHQ5 1161 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms