RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 ARRDC1Q8N5I2 433 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 MARCH1Q8TCQ1 289 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 PSMG3-AS1Q96PY0 264 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 GCM1Q9NP62 436 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 POLDIP2Q9Y2S7 368 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 CD55P08174 381 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 DTYMKP23919 212 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 PMELP40967 661 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 TLE4Q04727 773 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 OVCH2Q7RTZ1 564 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 TERB2Q8NHR7 220 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 PPA2Q9H2U2 334 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 PLEKHF2Q9H8W4 249 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 SAP30LQ9HAJ7 183 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 C12orf4Q9NQ89 552 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 RCC2Q9P258 522 aaKnown RBP15.55■□□□□ 0.08
SMPD1-208ENST00000533123 ANXA10Q9UJ72 324 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 RAI1Q7Z5J4 1906 aaPredicted RBP15.55■□□□□ 0.08
SMPD1-208ENST00000533123 MPV17LQ2QL34 196 aa15.54■□□□□ 0.08
SMPD1-208ENST00000533123 TGIF2LYQ8IUE0 185 aa15.54■□□□□ 0.08
SMPD1-208ENST00000533123 ZNF295-AS1Q8N0V1 137 aa15.54■□□□□ 0.08
SMPD1-208ENST00000533123 ADAD2Q8NCV1 583 aaKnown RBP15.54■□□□□ 0.08
SMPD1-208ENST00000533123 LRRC20Q8TCA0 184 aa15.54■□□□□ 0.08
SMPD1-208ENST00000533123 MEIKINA0A087WXM9 373 aa15.53■□□□□ 0.08
SMPD1-208ENST00000533123 RPS10-NUDT3A0A1W2PQS6 291 aa15.53■□□□□ 0.08
SMPD1-208ENST00000533123 SCO1O75880 301 aa15.53■□□□□ 0.08
SMPD1-208ENST00000533123 GATA4P43694 442 aa15.53■□□□□ 0.08
SMPD1-208ENST00000533123 LGALSLQ3ZCW2 172 aaPredicted RBP15.53■□□□□ 0.08
SMPD1-208ENST00000533123 ZDHHC22Q8N966 263 aa15.53■□□□□ 0.08
SMPD1-208ENST00000533123 POM121Q96HA1 1249 aa15.53■□□□□ 0.08
SMPD1-208ENST00000533123 NRIP2Q9BQI9 281 aa15.53■□□□□ 0.08
SMPD1-208ENST00000533123 EGLN1Q9GZT9 426 aa15.53■□□□□ 0.08
SMPD1-208ENST00000533123 ALX4Q9H161 411 aaPredicted RBP15.53■□□□□ 0.08
SMPD1-208ENST00000533123 MGAT4CQ9UBM8 478 aa15.53■□□□□ 0.08
SMPD1-208ENST00000533123 PPP1R3CQ9UQK1 317 aa15.53■□□□□ 0.08
SMPD1-208ENST00000533123 DYSFO75923 2080 aa15.53■□□□□ 0.08
SMPD1-208ENST00000533123 PTPN13Q12923 2485 aa15.53■□□□□ 0.08
SMPD1-208ENST00000533123 ZNF205O95201 554 aa15.53■□□□□ 0.08
SMPD1-208ENST00000533123 PGA5P0DJD9 388 aa15.53■□□□□ 0.08
SMPD1-208ENST00000533123 TNFRSF1AP19438 455 aa15.53■□□□□ 0.08
SMPD1-208ENST00000533123 PPOXP50336 477 aa15.53■□□□□ 0.08
SMPD1-208ENST00000533123 ERVK11-1P61568 191 aa15.53■□□□□ 0.08
SMPD1-208ENST00000533123 BAMBIQ13145 260 aa15.53■□□□□ 0.08
SMPD1-208ENST00000533123 C2orf68Q2NKX9 166 aa15.53■□□□□ 0.08
SMPD1-208ENST00000533123 AADACL3Q5VUY0 350 aa15.53■□□□□ 0.08
SMPD1-208ENST00000533123 UXS1Q8NBZ7 420 aa15.53■□□□□ 0.08
SMPD1-208ENST00000533123 CCDC107Q8WV48 283 aa15.53■□□□□ 0.08
SMPD1-208ENST00000533123 EDARQ9UNE0 448 aa15.53■□□□□ 0.08
SMPD1-208ENST00000533123 FBN2P35556 2912 aa15.53■□□□□ 0.08
SMPD1-208ENST00000533123 TESK1Q15569 626 aa15.52■□□□□ 0.08
SMPD1-208ENST00000533123 LHFPL1Q86WI0 220 aa15.52■□□□□ 0.08
SMPD1-208ENST00000533123 SUMF2Q8NBJ7 301 aa15.52■□□□□ 0.08
SMPD1-208ENST00000533123 RDH5Q92781 318 aa15.52■□□□□ 0.08
SMPD1-208ENST00000533123 ZNF436Q9C0F3 470 aaPredicted RBP15.52■□□□□ 0.08
SMPD1-208ENST00000533123 WDR13Q9H1Z4 485 aa15.52■□□□□ 0.08
SMPD1-208ENST00000533123 NBPF19A0A087WUL8 3843 aa15.52■□□□□ 0.07
SMPD1-208ENST00000533123 TRAV24A0A0B4J272 114 aa15.52■□□□□ 0.07
SMPD1-208ENST00000533123 I3L521 148 aa15.52■□□□□ 0.07
SMPD1-208ENST00000533123 WNT9BO14905 357 aa15.52■□□□□ 0.07
SMPD1-208ENST00000533123 MPC2O95563 127 aa15.52■□□□□ 0.07
SMPD1-208ENST00000533123 PI3P19957 117 aa15.52■□□□□ 0.07
SMPD1-208ENST00000533123 DHRS2Q13268 280 aa15.52■□□□□ 0.07
SMPD1-208ENST00000533123 EXOSC2Q13868 293 aaKnown RBP15.52■□□□□ 0.07
SMPD1-208ENST00000533123 NEK7Q8TDX7 302 aa15.52■□□□□ 0.07
SMPD1-208ENST00000533123 LRRC29Q8WV35 223 aa15.52■□□□□ 0.07
SMPD1-208ENST00000533123 DPCDQ9BVM2 203 aaPredicted RBP15.52■□□□□ 0.07
SMPD1-208ENST00000533123 CHIAQ9BZP6 476 aa15.52■□□□□ 0.07
SMPD1-208ENST00000533123 CHMP1AQ9HD42 196 aaPredicted RBP15.52■□□□□ 0.07
SMPD1-208ENST00000533123 OR5H14A6NHG9 310 aa15.51■□□□□ 0.07
SMPD1-208ENST00000533123 HLA-AP01891 365 aaKnown RBP15.51■□□□□ 0.07
SMPD1-208ENST00000533123 CDKN1AP38936 164 aa15.51■□□□□ 0.07
SMPD1-208ENST00000533123 PPP1R1AQ13522 171 aa15.51■□□□□ 0.07
SMPD1-208ENST00000533123 IL13RA2Q14627 380 aa15.51■□□□□ 0.07
SMPD1-208ENST00000533123 CLLU1Q5K131 121 aa15.51■□□□□ 0.07
SMPD1-208ENST00000533123 NLRC3Q7RTR2 1065 aa15.51■□□□□ 0.07
SMPD1-208ENST00000533123 C5orf24Q7Z6I8 188 aa15.51■□□□□ 0.07
SMPD1-208ENST00000533123 LINC00596Q86U02 117 aa15.51■□□□□ 0.07
SMPD1-208ENST00000533123 SLC25A42Q86VD7 318 aa15.51■□□□□ 0.07
SMPD1-208ENST00000533123 BOLLQ8N9W6 283 aaKnown RBP15.51■□□□□ 0.07
SMPD1-208ENST00000533123 POC1AQ8NBT0 407 aa15.51■□□□□ 0.07
SMPD1-208ENST00000533123 LIME1Q9H400 295 aa15.51■□□□□ 0.07
SMPD1-208ENST00000533123 MYOZ1Q9NP98 299 aaPredicted RBP15.51■□□□□ 0.07
SMPD1-208ENST00000533123 DCAF16Q9NXF7 216 aa15.51■□□□□ 0.07
SMPD1-208ENST00000533123 MCRIP1C9JLW8 97 aa15.51■□□□□ 0.07
SMPD1-208ENST00000533123 NXPH2O95156 264 aa15.51■□□□□ 0.07
SMPD1-208ENST00000533123 AKR1C4P17516 323 aa15.51■□□□□ 0.07
SMPD1-208ENST00000533123 SSTR2P30874 369 aa15.51■□□□□ 0.07
SMPD1-208ENST00000533123 TMEM17Q86X19 198 aa15.51■□□□□ 0.07
SMPD1-208ENST00000533123 WDR89Q96FK6 387 aaPredicted RBP15.51■□□□□ 0.07
SMPD1-208ENST00000533123 TMPRSS13Q9BYE2 586 aa15.51■□□□□ 0.07
SMPD1-208ENST00000533123 C5orf66Q9H5L9 145 aa15.51■□□□□ 0.07
SMPD1-208ENST00000533123 DLL4Q9NR61 685 aa15.51■□□□□ 0.07
SMPD1-208ENST00000533123 NPTNQ9Y639 398 aa15.51■□□□□ 0.07
SMPD1-208ENST00000533123 ABCA12Q86UK0 2595 aa15.5■□□□□ 0.07
SMPD1-208ENST00000533123 SIX6O95475 246 aa15.5■□□□□ 0.07
SMPD1-208ENST00000533123 CYB5R3P00387 301 aaPredicted RBP15.5■□□□□ 0.07
SMPD1-208ENST00000533123 OR5H8P0DN80 308 aa15.5■□□□□ 0.07
SMPD1-208ENST00000533123 ZNF44P15621 663 aa15.5■□□□□ 0.07
SMPD1-208ENST00000533123 GLRA1P23415 457 aa15.5■□□□□ 0.07
SMPD1-208ENST00000533123 GRK1Q15835 563 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms