RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 MADCAM1Q13477 382 aa14.17□□□□□ -0.14
PCF11-206ENST00000533018 HNF4GQ14541 408 aa14.17□□□□□ -0.14
PCF11-206ENST00000533018 IL13RA2Q14627 380 aa14.17□□□□□ -0.14
PCF11-206ENST00000533018 DRAM1Q8N682 238 aa14.17□□□□□ -0.14
PCF11-206ENST00000533018 OR10X1Q8NGY0 326 aa14.17□□□□□ -0.14
PCF11-206ENST00000533018 FAM118AQ9NWS6 357 aa14.17□□□□□ -0.14
PCF11-206ENST00000533018 PSG11Q9UQ72 335 aa14.17□□□□□ -0.14
PCF11-206ENST00000533018 ST3GAL6Q9Y274 331 aa14.17□□□□□ -0.14
PCF11-206ENST00000533018 PSMB11A5LHX3 300 aa14.16□□□□□ -0.14
PCF11-206ENST00000533018 OR7C1O76099 320 aaPredicted RBP14.16□□□□□ -0.14
PCF11-206ENST00000533018 CSTBP04080 98 aaKnown RBP14.16□□□□□ -0.14
PCF11-206ENST00000533018 TMEM11P17152 192 aa14.16□□□□□ -0.14
PCF11-206ENST00000533018 SSTR5P35346 364 aa14.16□□□□□ -0.14
PCF11-206ENST00000533018 PPP3R1P63098 170 aa14.16□□□□□ -0.14
PCF11-206ENST00000533018 RSBN1Q5VWQ0 802 aaPredicted RBP14.16□□□□□ -0.14
PCF11-206ENST00000533018 RPL22L1Q6P5R6 122 aaKnown RBP14.16□□□□□ -0.14
PCF11-206ENST00000533018 TMPRSS11AQ6ZMR5 421 aa14.16□□□□□ -0.14
PCF11-206ENST00000533018 THNSL2Q86YJ6 484 aa14.16□□□□□ -0.14
PCF11-206ENST00000533018 OSR2Q8N2R0 312 aa14.16□□□□□ -0.14
PCF11-206ENST00000533018 ZNF555Q8NEP9 628 aa14.16□□□□□ -0.14
PCF11-206ENST00000533018 PLPPR1Q8TBJ4 325 aa14.16□□□□□ -0.14
PCF11-206ENST00000533018 DPCDQ9BVM2 203 aaPredicted RBP14.16□□□□□ -0.14
PCF11-206ENST00000533018 METTL9Q9H1A3 318 aa14.16□□□□□ -0.14
PCF11-206ENST00000533018 NCOR1P1Q9H4R4 102 aa14.16□□□□□ -0.14
PCF11-206ENST00000533018 A0A1W2PPE3 182 aa14.15□□□□□ -0.14
PCF11-206ENST00000533018 LIMS3P0CW19 117 aa14.15□□□□□ -0.14
PCF11-206ENST00000533018 LIMS4P0CW20 117 aa14.15□□□□□ -0.14
PCF11-206ENST00000533018 ZNF93P35789 620 aaPredicted RBP14.15□□□□□ -0.14
PCF11-206ENST00000533018 KCNJ3P48549 501 aa14.15□□□□□ -0.14
PCF11-206ENST00000533018 RAB7AP51149 207 aa14.15□□□□□ -0.14
PCF11-206ENST00000533018 DIAPH2-AS1Q14236 149 aa14.15□□□□□ -0.14
PCF11-206ENST00000533018 SMN1Q16637 294 aaKnown RBP14.15□□□□□ -0.14
PCF11-206ENST00000533018 ZNF529Q6P280 563 aa14.15□□□□□ -0.14
PCF11-206ENST00000533018 ZNF329Q86UD4 541 aa14.15□□□□□ -0.14
PCF11-206ENST00000533018 SUMF2Q8NBJ7 301 aa14.15□□□□□ -0.14
PCF11-206ENST00000533018 APH1BQ8WW43 257 aa14.15□□□□□ -0.14
PCF11-206ENST00000533018 RGP1Q92546 391 aaPredicted RBP14.15□□□□□ -0.14
PCF11-206ENST00000533018 TMEM106AQ96A25 262 aa14.15□□□□□ -0.14
PCF11-206ENST00000533018 S100A14Q9HCY8 104 aa14.15□□□□□ -0.14
PCF11-206ENST00000533018 MRPS18AQ9NVS2 196 aaKnown RBP14.15□□□□□ -0.14
PCF11-206ENST00000533018 FAM90A18PA6NE21 464 aa14.14□□□□□ -0.15
PCF11-206ENST00000533018 FAM90A16PA6NEW6 464 aa14.14□□□□□ -0.15
PCF11-206ENST00000533018 FAM90A20PA6NIJ5 464 aa14.14□□□□□ -0.15
PCF11-206ENST00000533018 FAM90A9PA6NNJ1 464 aa14.14□□□□□ -0.15
PCF11-206ENST00000533018 FAM90A12PA8MX19 464 aa14.14□□□□□ -0.15
PCF11-206ENST00000533018 FAM90A5PA8MXJ8 464 aa14.14□□□□□ -0.15
PCF11-206ENST00000533018 BAG2O95816 211 aa14.14□□□□□ -0.15
PCF11-206ENST00000533018 FAM90A15PP0C7V4 464 aa14.14□□□□□ -0.15
PCF11-206ENST00000533018 FAM90A13PP0C7W8 464 aa14.14□□□□□ -0.15
PCF11-206ENST00000533018 FAM90A14PP0C7W9 464 aa14.14□□□□□ -0.15
PCF11-206ENST00000533018 FAM90A24PP0C7X0 464 aa14.14□□□□□ -0.15
PCF11-206ENST00000533018 SERPINA2P20848 420 aa14.14□□□□□ -0.15
PCF11-206ENST00000533018 ETV1P50549 477 aa14.14□□□□□ -0.15
PCF11-206ENST00000533018 CCDC58Q4VC31 144 aa14.14□□□□□ -0.15
PCF11-206ENST00000533018 ATAD3CQ5T2N8 411 aa14.14□□□□□ -0.15
PCF11-206ENST00000533018 DDI2Q5TDH0 399 aa14.14□□□□□ -0.15
PCF11-206ENST00000533018 OR2G6Q5TZ20 316 aa14.14□□□□□ -0.15
PCF11-206ENST00000533018 XAF1Q6GPH4 301 aa14.14□□□□□ -0.15
PCF11-206ENST00000533018 OR52N1Q8NH53 320 aa14.14□□□□□ -0.15
PCF11-206ENST00000533018 NEK7Q8TDX7 302 aa14.14□□□□□ -0.15
PCF11-206ENST00000533018 RCC1LQ96I51 464 aaKnown RBP14.14□□□□□ -0.15
PCF11-206ENST00000533018 NOL4LQ96MY1 436 aaPredicted RBP14.14□□□□□ -0.15
PCF11-206ENST00000533018 FGF20Q9NP95 211 aaPredicted RBP14.14□□□□□ -0.15
PCF11-206ENST00000533018 TMEM138Q9NPI0 162 aa14.14□□□□□ -0.15
PCF11-206ENST00000533018 ZNF581Q9P0T4 197 aa14.14□□□□□ -0.15
PCF11-206ENST00000533018 A0A1W2PPI3 338 aa14.13□□□□□ -0.15
PCF11-206ENST00000533018 SERPINE3A8MV23 424 aa14.13□□□□□ -0.15
PCF11-206ENST00000533018 NPIPB11E5RHQ5 1161 aa14.13□□□□□ -0.15
PCF11-206ENST00000533018 GEMIN2O14893 280 aaKnown RBP14.13□□□□□ -0.15
PCF11-206ENST00000533018 IGKV1D-33P01593 117 aa14.13□□□□□ -0.15
PCF11-206ENST00000533018 IGKV1-33P01594 117 aa14.13□□□□□ -0.15
PCF11-206ENST00000533018 BDKRB2P30411 391 aa14.13□□□□□ -0.15
PCF11-206ENST00000533018 DEFB121Q5J5C9 76 aa14.13□□□□□ -0.15
PCF11-206ENST00000533018 ASCL4Q6XD76 172 aa14.13□□□□□ -0.15
PCF11-206ENST00000533018 MOB3BQ86TA1 216 aa14.13□□□□□ -0.15
PCF11-206ENST00000533018 OR8H3Q8N146 312 aa14.13□□□□□ -0.15
PCF11-206ENST00000533018 PQLC1Q8N2U9 271 aa14.13□□□□□ -0.15
PCF11-206ENST00000533018 OR10A7Q8NGE5 316 aa14.13□□□□□ -0.15
PCF11-206ENST00000533018 OR51D1Q8NGF3 324 aa14.13□□□□□ -0.15
PCF11-206ENST00000533018 CHPT1Q8WUD6 406 aa14.13□□□□□ -0.15
PCF11-206ENST00000533018 CCDC107Q8WV48 283 aa14.13□□□□□ -0.15
PCF11-206ENST00000533018 LINC00574Q9H8X3 128 aa14.13□□□□□ -0.15
PCF11-206ENST00000533018 PAK1IP1Q9NWT1 392 aaPredicted RBP14.13□□□□□ -0.15
PCF11-206ENST00000533018 LINC00527Q9UJ94 153 aa14.13□□□□□ -0.15
PCF11-206ENST00000533018 TMEM30CPA0ZSE6 113 aa14.12□□□□□ -0.15
PCF11-206ENST00000533018 CCRL2O00421 344 aa14.12□□□□□ -0.15
PCF11-206ENST00000533018 HSD17B6O14756 317 aa14.12□□□□□ -0.15
PCF11-206ENST00000533018 DUS4LO95620 317 aaKnown RBP14.12□□□□□ -0.15
PCF11-206ENST00000533018 MYL12AP19105 171 aa14.12□□□□□ -0.15
PCF11-206ENST00000533018 GZMHP20718 246 aa14.12□□□□□ -0.15
PCF11-206ENST00000533018 DCKP27707 260 aa14.12□□□□□ -0.15
PCF11-206ENST00000533018 REG1BP48304 166 aa14.12□□□□□ -0.15
PCF11-206ENST00000533018 RBM11P57052 281 aaKnown RBP14.12□□□□□ -0.15
PCF11-206ENST00000533018 SLC16A12Q6ZSM3 486 aa14.12□□□□□ -0.15
PCF11-206ENST00000533018 C5orf56Q8N8D9 126 aa14.12□□□□□ -0.15
PCF11-206ENST00000533018 Q8NFD4 153 aa14.12□□□□□ -0.15
PCF11-206ENST00000533018 UBALD1Q8TB05 177 aa14.12□□□□□ -0.15
PCF11-206ENST00000533018 ARL11Q969Q4 196 aa14.12□□□□□ -0.15
PCF11-206ENST00000533018 ORAI1Q96D31 301 aa14.12□□□□□ -0.15
PCF11-206ENST00000533018 BABAM2Q9NXR7 383 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms