RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 ZNF729A6NN14 1252 aaPredicted RBP16.14■□□□□ 0.17
CPSF1-209ENST00000532725 TMEM14DPA8MWL7 114 aa16.14■□□□□ 0.17
CPSF1-209ENST00000532725 ODF3BA8MYP8 253 aa16.14■□□□□ 0.17
CPSF1-209ENST00000532725 CLPXO76031 633 aa16.14■□□□□ 0.17
CPSF1-209ENST00000532725 BPNT1O95861 308 aa16.14■□□□□ 0.17
CPSF1-209ENST00000532725 MPIG6BO95866 241 aa16.14■□□□□ 0.17
CPSF1-209ENST00000532725 CDK2P24941 298 aa16.14■□□□□ 0.17
CPSF1-209ENST00000532725 GDNFP39905 211 aa16.14■□□□□ 0.17
CPSF1-209ENST00000532725 UNC119Q13432 240 aa16.14■□□□□ 0.17
CPSF1-209ENST00000532725 C16orf87Q6PH81 154 aa16.14■□□□□ 0.17
CPSF1-209ENST00000532725 BAIAP2L2Q6UXY1 529 aa16.14■□□□□ 0.17
CPSF1-209ENST00000532725 KCNG3Q8TAE7 436 aa16.14■□□□□ 0.17
CPSF1-209ENST00000532725 SSMEM1Q8WWF3 244 aa16.14■□□□□ 0.17
CPSF1-209ENST00000532725 MEGF9Q9H1U4 602 aa16.14■□□□□ 0.17
CPSF1-209ENST00000532725 TMEM133Q9H2Q1 129 aa16.14■□□□□ 0.17
CPSF1-209ENST00000532725 PEX16Q9Y5Y5 336 aa16.14■□□□□ 0.17
CPSF1-209ENST00000532725 POMT1Q9Y6A1 747 aa16.14■□□□□ 0.17
CPSF1-209ENST00000532725 MCRIP1C9JLW8 97 aa16.13■□□□□ 0.17
CPSF1-209ENST00000532725 IGHV4-59P01825 116 aa16.13■□□□□ 0.17
CPSF1-209ENST00000532725 MT-ND4P03905 459 aa16.13■□□□□ 0.17
CPSF1-209ENST00000532725 GLAP06280 429 aa16.13■□□□□ 0.17
CPSF1-209ENST00000532725 FUT3P21217 361 aa16.13■□□□□ 0.17
CPSF1-209ENST00000532725 FGF9P31371 208 aaPredicted RBP16.13■□□□□ 0.17
CPSF1-209ENST00000532725 RPS27AP62979 156 aaKnown RBP16.13■□□□□ 0.17
CPSF1-209ENST00000532725 LDLRAD2Q5SZI1 272 aa16.13■□□□□ 0.17
CPSF1-209ENST00000532725 PRAMEF5Q5TYX0 476 aa16.13■□□□□ 0.17
CPSF1-209ENST00000532725 ZNF626Q68DY1 528 aa16.13■□□□□ 0.17
CPSF1-209ENST00000532725 C22orf42Q6IC83 251 aa16.13■□□□□ 0.17
CPSF1-209ENST00000532725 RAB12Q6IQ22 244 aa16.13■□□□□ 0.17
CPSF1-209ENST00000532725 BEND2Q8NDZ0 799 aa16.13■□□□□ 0.17
CPSF1-209ENST00000532725 KCNK15Q9H427 330 aa16.13■□□□□ 0.17
CPSF1-209ENST00000532725 PLGRKTQ9HBL7 147 aa16.13■□□□□ 0.17
CPSF1-209ENST00000532725 ZNRD1Q9P1U0 126 aa16.13■□□□□ 0.17
CPSF1-209ENST00000532725 STUB1Q9UNE7 303 aa16.13■□□□□ 0.17
CPSF1-209ENST00000532725 IGHV2-26A0A0B4J1V2 119 aa16.12■□□□□ 0.17
CPSF1-209ENST00000532725 TRAV39A0A0B4J263 110 aa16.12■□□□□ 0.17
CPSF1-209ENST00000532725 TMEM89A2RUT3 159 aa16.12■□□□□ 0.17
CPSF1-209ENST00000532725 H3BUI4 141 aa16.12■□□□□ 0.17
CPSF1-209ENST00000532725 TNFAIP8O95379 198 aa16.12■□□□□ 0.17
CPSF1-209ENST00000532725 PAHP00439 452 aa16.12■□□□□ 0.17
CPSF1-209ENST00000532725 ARG1P05089 322 aa16.12■□□□□ 0.17
CPSF1-209ENST00000532725 ARSBP15848 533 aa16.12■□□□□ 0.17
CPSF1-209ENST00000532725 OMGP23515 440 aa16.12■□□□□ 0.17
CPSF1-209ENST00000532725 LGALS4P56470 323 aa16.12■□□□□ 0.17
CPSF1-209ENST00000532725 RBM39Q14498 530 aaKnown RBP16.12■□□□□ 0.17
CPSF1-209ENST00000532725 P2RY14Q15391 338 aa16.12■□□□□ 0.17
CPSF1-209ENST00000532725 NEDD8Q15843 81 aa16.12■□□□□ 0.17
CPSF1-209ENST00000532725 RAB11BQ15907 218 aa16.12■□□□□ 0.17
CPSF1-209ENST00000532725 OR52W1Q6IF63 320 aa16.12■□□□□ 0.17
CPSF1-209ENST00000532725 ZNF497Q6ZNH5 498 aa16.12■□□□□ 0.17
CPSF1-209ENST00000532725 LHFPL4Q7Z7J7 247 aa16.12■□□□□ 0.17
CPSF1-209ENST00000532725 TSPAN14Q8NG11 270 aa16.12■□□□□ 0.17
CPSF1-209ENST00000532725 CYYR1Q96J86 154 aa16.12■□□□□ 0.17
CPSF1-209ENST00000532725 TM2D1Q9BX74 207 aa16.12■□□□□ 0.17
CPSF1-209ENST00000532725 CHIAQ9BZP6 476 aa16.12■□□□□ 0.17
CPSF1-209ENST00000532725 TNFRSF19Q9NS68 423 aa16.12■□□□□ 0.17
CPSF1-209ENST00000532725 TXNL4BQ9NX01 149 aaKnown RBP16.12■□□□□ 0.17
CPSF1-209ENST00000532725 A0A087X0M5 115 aa16.11■□□□□ 0.17
CPSF1-209ENST00000532725 A0A1B0GX30 115 aa16.11■□□□□ 0.17
CPSF1-209ENST00000532725 TMEM30CPA0ZSE6 113 aa16.11■□□□□ 0.17
CPSF1-209ENST00000532725 NPIPB11E5RHQ5 1161 aa16.11■□□□□ 0.17
CPSF1-209ENST00000532725 PDCD5O14737 125 aa16.11■□□□□ 0.17
CPSF1-209ENST00000532725 GZMHP20718 246 aa16.11■□□□□ 0.17
CPSF1-209ENST00000532725 GLP1RP43220 463 aa16.11■□□□□ 0.17
CPSF1-209ENST00000532725 CLDN12P56749 244 aa16.11■□□□□ 0.17
CPSF1-209ENST00000532725 C2orf76Q3KRA6 126 aa16.11■□□□□ 0.17
CPSF1-209ENST00000532725 OR2W3Q7Z3T1 314 aa16.11■□□□□ 0.17
CPSF1-209ENST00000532725 GAPTQ8N292 157 aa16.11■□□□□ 0.17
CPSF1-209ENST00000532725 ABHD12Q8N2K0 398 aa16.11■□□□□ 0.17
CPSF1-209ENST00000532725 OR51D1Q8NGF3 324 aa16.11■□□□□ 0.17
CPSF1-209ENST00000532725 MRGPRDQ8TDS7 321 aa16.11■□□□□ 0.17
CPSF1-209ENST00000532725 NEK7Q8TDX7 302 aa16.11■□□□□ 0.17
CPSF1-209ENST00000532725 CLEC7AQ9BXN2 247 aa16.11■□□□□ 0.17
CPSF1-209ENST00000532725 TMEM59Q9BXS4 323 aa16.11■□□□□ 0.17
CPSF1-209ENST00000532725 OR51E2Q9H255 320 aa16.11■□□□□ 0.17
CPSF1-209ENST00000532725 DPAGT1Q9H3H5 408 aa16.11■□□□□ 0.17
CPSF1-209ENST00000532725 CALYQ9NYX4 217 aa16.11■□□□□ 0.17
CPSF1-209ENST00000532725 FBLN5Q9UBX5 448 aa16.11■□□□□ 0.17
CPSF1-209ENST00000532725 TBL2Q9Y4P3 447 aaKnown RBP16.11■□□□□ 0.17
CPSF1-209ENST00000532725 A0A087WXM4 84 aa16.1■□□□□ 0.17
CPSF1-209ENST00000532725 PDCD6O75340 191 aa16.1■□□□□ 0.17
CPSF1-209ENST00000532725 MYL9P24844 172 aa16.1■□□□□ 0.17
CPSF1-209ENST00000532725 PAX6P26367 422 aa16.1■□□□□ 0.17
CPSF1-209ENST00000532725 CFPP27918 469 aa16.1■□□□□ 0.17
CPSF1-209ENST00000532725 CD34P28906 385 aa16.1■□□□□ 0.17
CPSF1-209ENST00000532725 OR10A3P58181 314 aa16.1■□□□□ 0.17
CPSF1-209ENST00000532725 DYNC1I2Q13409 638 aaKnown RBP16.1■□□□□ 0.17
CPSF1-209ENST00000532725 UTF1Q5T230 341 aa16.1■□□□□ 0.17
CPSF1-209ENST00000532725 RTN4RL2Q86UN3 420 aa16.1■□□□□ 0.17
CPSF1-209ENST00000532725 DYNAPQ8N1N2 210 aa16.1■□□□□ 0.17
CPSF1-209ENST00000532725 FAM89BQ8N5H3 189 aa16.1■□□□□ 0.17
CPSF1-209ENST00000532725 DYRK2Q92630 601 aa16.1■□□□□ 0.17
CPSF1-209ENST00000532725 GCDHQ92947 438 aaPredicted RBP16.1■□□□□ 0.17
CPSF1-209ENST00000532725 FAM3DQ96BQ1 224 aa16.1■□□□□ 0.17
CPSF1-209ENST00000532725 MALSU1Q96EH3 234 aa16.1■□□□□ 0.17
CPSF1-209ENST00000532725 KIRREL1Q96J84 757 aa16.1■□□□□ 0.17
CPSF1-209ENST00000532725 LPAR5Q9H1C0 372 aa16.1■□□□□ 0.17
CPSF1-209ENST00000532725 ZNF696Q9H7X3 374 aa16.1■□□□□ 0.17
CPSF1-209ENST00000532725 ETAA1Q9NY74 926 aa16.1■□□□□ 0.17
CPSF1-209ENST00000532725 STEAP1Q9UHE8 339 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms