RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 DUSP8Q13202 625 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 RUNX2Q13950 521 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 TRMT12Q53H54 448 aaKnown RBP5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 SAMD13Q5VXD3 122 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 FCRL6Q6DN72 434 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 MED25Q71SY5 747 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 VN1R4Q7Z5H5 301 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 PRR18Q8N4B5 295 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 CISD2Q8N5K1 135 aaKnown RBP5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 OR5C1Q8NGR4 320 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 RPS4Y2Q8TD47 263 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 RTN4IP1Q8WWV3 396 aaPredicted RBP5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 SDF2Q99470 211 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 ZNF160Q9HCG1 818 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 CYTL1Q9NRR1 136 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 HSPB7Q9UBY9 170 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 KLK13Q9UKR3 277 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 WASHC3Q9Y3C0 194 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 FAM24AA6NFZ4 105 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 ZNF207O43670 478 aaKnown RBP5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 HSBP1O75506 76 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 HRASP01112 189 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 IL2RAP01589 272 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 MELTFP08582 738 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 CEACAM1P13688 526 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 PIGPP57054 158 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 PLGLB1Q02325 96 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 SRYQ05066 204 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 HIST3H3Q16695 136 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 WDR38Q5JTN6 314 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 ZNF468Q5VIY5 522 aaPredicted RBP5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 RNASEH2CQ8TDP1 164 aaKnown RBP5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 ORAOV1Q8WV07 137 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 MVB12AQ96EY5 273 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 SCNM1Q9BWG6 230 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 METTL7AQ9H8H3 244 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 HS3ST3B1Q9Y662 390 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 ABCA4P78363 2273 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 A0A1W2PN81 502 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 PRAMEF27A3QJZ7 478 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 NKX6-3A6NJ46 265 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 CD300LBA8K4G0 201 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 CDC14BO60729 498 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 TNFSF13O75888 250 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 UMODP07911 640 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 SRP19P09132 144 aaKnown RBP5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 MGST1P10620 155 aaKnown RBP5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 HLA-DOBP13765 273 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 SELEP16581 610 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 ZNF16P17020 682 aaPredicted RBP5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 BSGP35613 385 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 FASLGP48023 281 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 NANOS3P60323 173 aaKnown RBP5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 CSRP2Q16527 193 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 SP6Q3SY56 376 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 OR8G2PQ6IF36 304 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 ZNF793Q6ZN11 406 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 RFLNBQ8N5W9 214 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 ZNF775Q96BV0 537 aaPredicted RBP5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 NUDT16L1Q9BRJ7 211 aaKnown RBP5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 MAGT1Q9H0U3 335 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 GLRX2Q9NS18 164 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 PLA2G3Q9NZ20 509 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 FRRS1LQ9P0K9 344 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 FOXD3Q9UJU5 478 aaPredicted RBP5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 NXT1Q9UKK6 140 aaKnown RBP5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 KIAA1671Q9BY89 1806 aa5.97□□□□□ -1.45
TGFBR3-209ENST00000532540 IGKV1-8A0A0C4DH67 115 aa5.96□□□□□ -1.45
TGFBR3-209ENST00000532540 A0A1B0GX78 115 aa5.96□□□□□ -1.45
TGFBR3-209ENST00000532540 A0A1W2PPV4 95 aa5.96□□□□□ -1.45
TGFBR3-209ENST00000532540 A0A1W2PPV9 198 aa5.96□□□□□ -1.45
TGFBR3-209ENST00000532540 GAGE10A6NGK3 116 aa5.96□□□□□ -1.45
TGFBR3-209ENST00000532540 H0YIZ8 118 aa5.96□□□□□ -1.45
TGFBR3-209ENST00000532540 CYR61O00622 381 aa5.96□□□□□ -1.45
TGFBR3-209ENST00000532540 CDX4O14627 284 aaPredicted RBP5.96□□□□□ -1.45
TGFBR3-209ENST00000532540 ABHD16AO95870 558 aa5.96□□□□□ -1.45
TGFBR3-209ENST00000532540 RPS4Y1P22090 263 aaKnown RBP5.96□□□□□ -1.45
TGFBR3-209ENST00000532540 NHLH1Q02575 133 aa5.96□□□□□ -1.45
TGFBR3-209ENST00000532540 MMDQ15546 238 aa5.96□□□□□ -1.45
TGFBR3-209ENST00000532540 TEX38Q6PEX7 206 aa5.96□□□□□ -1.45
TGFBR3-209ENST00000532540 OR10AC1Q8NH08 325 aa5.96□□□□□ -1.45
TGFBR3-209ENST00000532540 TNFRSF14Q92956 283 aa5.96□□□□□ -1.45
TGFBR3-209ENST00000532540 VN1R1Q9GZP7 353 aa5.96□□□□□ -1.45
TGFBR3-209ENST00000532540 ZNF442Q9H7R0 627 aa5.96□□□□□ -1.45
TGFBR3-209ENST00000532540 SERTAD4Q9NUC0 356 aa5.96□□□□□ -1.45
TGFBR3-209ENST00000532540 VDAC3Q9Y277 283 aa5.96□□□□□ -1.45
TGFBR3-209ENST00000532540 SLC5A6Q9Y289 635 aa5.96□□□□□ -1.45
TGFBR3-209ENST00000532540 CXorf51AA0A1B0GTR3 108 aa5.96□□□□□ -1.46
TGFBR3-209ENST00000532540 TMEM238C9JI98 176 aa5.96□□□□□ -1.46
TGFBR3-209ENST00000532540 SMPD2O60906 423 aa5.96□□□□□ -1.46
TGFBR3-209ENST00000532540 DEDDO75618 318 aa5.96□□□□□ -1.46
TGFBR3-209ENST00000532540 ZGLP1P0C6A0 271 aa5.96□□□□□ -1.46
TGFBR3-209ENST00000532540 BRS3P32247 399 aa5.96□□□□□ -1.46
TGFBR3-209ENST00000532540 RIPPLY3P57055 190 aa5.96□□□□□ -1.46
TGFBR3-209ENST00000532540 SELENOTP62341 195 aa5.96□□□□□ -1.46
TGFBR3-209ENST00000532540 ZNF154Q13106 437 aa5.96□□□□□ -1.46
TGFBR3-209ENST00000532540 ACKR1Q16570 336 aa5.96□□□□□ -1.46
TGFBR3-209ENST00000532540 SLC48A1Q6P1K1 146 aa5.96□□□□□ -1.46
TGFBR3-209ENST00000532540 C6orf15Q6UXA7 325 aaPredicted RBP5.96□□□□□ -1.46
TGFBR3-209ENST00000532540 NPSR1Q6W5P4 371 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms