RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 SCGB1C2P0DMR2 95 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 ZNF14P17017 642 aaPredicted RBP1.63□□□□□ -2.15
CD44-234ENST00000531873 CNTFRP26992 372 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 PSMB9P28065 219 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 CD40LGP29965 261 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 PYCR1P32322 319 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 DLX6P56179 175 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 ZNF235Q14590 738 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 GOLGA7BQ2TAP0 167 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 MRPL2Q5T653 305 aaKnown RBP1.63□□□□□ -2.15
CD44-234ENST00000531873 ELP2Q6IA86 826 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 LAIR2Q6ISS4 152 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 FAM45BPQ6NSW5 357 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 CASP12Q6UXS9 341 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 ADM2Q7Z4H4 148 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 FUNDC1Q8IVP5 155 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 FAM9CQ8IZT9 166 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 ZFP82Q8N141 532 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 MUC15Q8N387 334 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 OR8A1Q8NGG7 326 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 SCGB1C1Q8TD33 95 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 MAL2Q969L2 176 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 OLFM3Q96PB7 478 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 GPR22Q99680 433 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 SCRT1Q9BWW7 348 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 EBPLQ9BY08 206 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 ULBP1Q9BZM6 244 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 ING2Q9H160 280 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 VSIRQ9H7M9 311 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 ZNF586Q9NXT0 402 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 HMGXB4Q9UGU5 601 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 PRO0461Q9UI25 63 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 NAGKQ9UJ70 344 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 C14orf166Q9Y224 244 aaKnown RBP1.63□□□□□ -2.15
CD44-234ENST00000531873 BTRCQ9Y297 605 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 CDK12Q9NYV4 1490 aaPredicted RBP1.63□□□□□ -2.15
CD44-234ENST00000531873 SCRIBQ14160 1630 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 POLR3AO14802 1390 aaPredicted RBP1.62□□□□□ -2.15
CD44-234ENST00000531873 RAB3GAP2Q9H2M9 1393 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 MYO15BQ96JP2 1530 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 CUL9Q8IWT3 2517 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 IGKV1OR2-108A0A075B7D4 117 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 IGHV1-45A0A0A0MS14 117 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 IGHV3-21A0A0B4J1V1 117 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 C1orf232A0A0U1RR37 186 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 GMNCA6NCL1 334 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 GOLGA6L10A6NI86 522 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 EFCAB9A8MZ26 197 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 IGLL5B9A064 214 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 F5H5K5 113 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 COCHO43405 550 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 UGT2B11O75310 529 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 ASS1P00966 412 aaKnown RBP1.62□□□□□ -2.15
CD44-234ENST00000531873 TPM3P06753 285 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 GTF2F2P13984 249 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 PVALBP20472 110 aaPredicted RBP1.62□□□□□ -2.15
CD44-234ENST00000531873 CLDN12P56749 244 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 RAB25P57735 213 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 TPM4P67936 248 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 COTL1Q14019 142 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 C4orf26Q17RF5 130 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 TMEM69Q5SWH9 247 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 HES3Q5TGS1 186 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 PLEKHG7Q6ZR37 379 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 TMEM136Q6ZRR5 245 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 RIBC1Q8N443 379 aaPredicted RBP1.62□□□□□ -2.15
CD44-234ENST00000531873 ATP6V1C2Q8NEY4 427 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 OR4C13Q8NGP0 309 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 DDI1Q8WTU0 396 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 C2orf15Q8WU43 125 aaKnown RBP1.62□□□□□ -2.15
CD44-234ENST00000531873 RMI2Q96E14 147 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 SEC22CQ9BRL7 303 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 ZNF426Q9BUY5 554 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 C1orf50Q9BV19 199 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 TSSK6Q9BXA6 273 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 PLA2G12AQ9BZM1 189 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 DMAC2Q9NW81 257 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 POMPQ9Y244 141 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 ATRNO75882 1429 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 CHD8Q9HCK8 2581 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 KMT2EQ8IZD2 1858 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 TRPM6Q9BX84 2022 aa1.62□□□□□ -2.15
CD44-234ENST00000531873 NUP153P49790 1475 aaKnown RBP1.62□□□□□ -2.15
CD44-234ENST00000531873 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.61□□□□□ -2.15
CD44-234ENST00000531873 RGS12O14924 1447 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 FTCDNL1E5RQL4 147 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 F5H5P2 479 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 PHYHO14832 338 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 RGS5O15539 181 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 ATP8B1O43520 1251 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 IGHG2P01859 326 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 TRGV3P03979 118 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 OCMP0CE72 109 aaPredicted RBP1.61□□□□□ -2.15
CD44-234ENST00000531873 PET100P0DJ07 73 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 ZNF3P17036 446 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 AKR1C4P17516 323 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 GRPRP30550 384 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 ZNF83P51522 516 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 DYNLL1P63167 89 aaKnown RBP1.61□□□□□ -2.15
CD44-234ENST00000531873 FMODQ06828 376 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms