RNA–Protein interactions for RNA: ENST00000531637.5

USP33-217, Transcript of ubiquitin specific peptidase 33, human

TSL 3

Gene USP33, Length 384 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP33-217	ENST00000531637	HSPA13	P48723	471 aa		3.03	□□□□□ -1.92
USP33-217	ENST00000531637	IL15RA	Q13261	267 aa		3.03	□□□□□ -1.92
USP33-217	ENST00000531637	PAFAH1B3	Q15102	231 aa	Known RBP	3.03	□□□□□ -1.92
USP33-217	ENST00000531637	ZNHIT3	Q15649	155 aa	Predicted RBP	3.03	□□□□□ -1.92
USP33-217	ENST00000531637	EXOC3L4	Q17RC7	722 aa		3.03	□□□□□ -1.92
USP33-217	ENST00000531637	PLEKHG7	Q6ZR37	379 aa		3.03	□□□□□ -1.92
USP33-217	ENST00000531637	OR4C13	Q8NGP0	309 aa		3.03	□□□□□ -1.92
USP33-217	ENST00000531637	OR2K2	Q8NGT1	345 aa		3.03	□□□□□ -1.92
USP33-217	ENST00000531637	DCUN1D5	Q9BTE7	237 aa		3.03	□□□□□ -1.92
USP33-217	ENST00000531637	EBPL	Q9BY08	206 aa		3.03	□□□□□ -1.92
USP33-217	ENST00000531637	PLA2G12A	Q9BZM1	189 aa		3.03	□□□□□ -1.92
USP33-217	ENST00000531637	EFCAB9	A8MZ26	197 aa		3.02	□□□□□ -1.93
USP33-217	ENST00000531637	ADAP1	O75689	374 aa		3.02	□□□□□ -1.93
USP33-217	ENST00000531637	PVALB	P20472	110 aa	Predicted RBP	3.02	□□□□□ -1.93
USP33-217	ENST00000531637	LDLRAD2	Q5SZI1	272 aa		3.02	□□□□□ -1.93
USP33-217	ENST00000531637	SLC13A5	Q86YT5	568 aa	Predicted RBP	3.02	□□□□□ -1.93
USP33-217	ENST00000531637	ZIC4	Q8N9L1	334 aa		3.02	□□□□□ -1.93
USP33-217	ENST00000531637	BPIFB6	Q8NFQ5	453 aa		3.02	□□□□□ -1.93
USP33-217	ENST00000531637	OR2V2	Q96R30	315 aa		3.02	□□□□□ -1.93
USP33-217	ENST00000531637	DMAC2	Q9NW81	257 aa		3.02	□□□□□ -1.93
USP33-217	ENST00000531637	KIAA1671	Q9BY89	1806 aa		3.02	□□□□□ -1.93
USP33-217	ENST00000531637		C9J4A7	227 aa		3.01	□□□□□ -1.93
USP33-217	ENST00000531637		F5H5K5	113 aa		3.01	□□□□□ -1.93
USP33-217	ENST00000531637	TMEM250	H0YL14	139 aa		3.01	□□□□□ -1.93
USP33-217	ENST00000531637	ISLR	O14498	428 aa		3.01	□□□□□ -1.93
USP33-217	ENST00000531637	SYNGR1	O43759	233 aa		3.01	□□□□□ -1.93
USP33-217	ENST00000531637	INAFM2	P0DMQ5	153 aa		3.01	□□□□□ -1.93
USP33-217	ENST00000531637	RNASE2	P10153	161 aa	Known RBP	3.01	□□□□□ -1.93
USP33-217	ENST00000531637	STC1	P52823	247 aa		3.01	□□□□□ -1.93
USP33-217	ENST00000531637		Q6ZQT7	251 aa		3.01	□□□□□ -1.93
USP33-217	ENST00000531637	ZFP82	Q8N141	532 aa		3.01	□□□□□ -1.93
USP33-217	ENST00000531637	OR4P4	Q8NGL7	312 aa		3.01	□□□□□ -1.93
USP33-217	ENST00000531637	ZNF721	Q8TF20	911 aa		3.01	□□□□□ -1.93
USP33-217	ENST00000531637	DNAJB3	Q8WWF6	145 aa		3.01	□□□□□ -1.93
USP33-217	ENST00000531637	ZNF492	Q9P255	531 aa		3.01	□□□□□ -1.93
USP33-217	ENST00000531637	FBXL3	Q9UKT7	428 aa		3.01	□□□□□ -1.93
USP33-217	ENST00000531637	ICOS	Q9Y6W8	199 aa		3.01	□□□□□ -1.93
USP33-217	ENST00000531637	LOXHD1	Q8IVV2	1947 aa		3	□□□□□ -1.93
USP33-217	ENST00000531637	GOLGA6L10	A6NI86	522 aa		3	□□□□□ -1.93
USP33-217	ENST00000531637	TOX3	O15405	576 aa	Predicted RBP	3	□□□□□ -1.93
USP33-217	ENST00000531637	PSIP1	O75475	530 aa	Known RBP	3	□□□□□ -1.93
USP33-217	ENST00000531637	GPR75	O95800	540 aa		3	□□□□□ -1.93
USP33-217	ENST00000531637	IGHV3-53	P01767	116 aa		3	□□□□□ -1.93
USP33-217	ENST00000531637	CD5	P06127	495 aa		3	□□□□□ -1.93
USP33-217	ENST00000531637	ACTR1B	P42025	376 aa		3	□□□□□ -1.93
USP33-217	ENST00000531637	DLX6	P56179	175 aa		3	□□□□□ -1.93
USP33-217	ENST00000531637	CLEC12B	Q2HXU8	276 aa		3	□□□□□ -1.93
USP33-217	ENST00000531637	LGALSL	Q3ZCW2	172 aa	Predicted RBP	3	□□□□□ -1.93
USP33-217	ENST00000531637	MTERF4	Q7Z6M4	381 aa	Known RBP	3	□□□□□ -1.93
USP33-217	ENST00000531637	FXYD5	Q96DB9	178 aa		3	□□□□□ -1.93
USP33-217	ENST00000531637	TMEM56	Q96MV1	263 aa		3	□□□□□ -1.93
USP33-217	ENST00000531637	TRIB3	Q96RU7	358 aa		3	□□□□□ -1.93
USP33-217	ENST00000531637	PRSS27	Q9BQR3	290 aa		3	□□□□□ -1.93
USP33-217	ENST00000531637	SHANK2-AS3	Q9BTD1	123 aa		3	□□□□□ -1.93
USP33-217	ENST00000531637	BCL2L14	Q9BZR8	327 aa		3	□□□□□ -1.93
USP33-217	ENST00000531637	GABARAPL1	Q9H0R8	117 aa		3	□□□□□ -1.93
USP33-217	ENST00000531637	ABCG5	Q9H222	651 aa		3	□□□□□ -1.93
USP33-217	ENST00000531637	OR51E2	Q9H255	320 aa		3	□□□□□ -1.93
USP33-217	ENST00000531637	IMP3	Q9NV31	184 aa	Known RBP	3	□□□□□ -1.93
USP33-217	ENST00000531637	TICRR	Q7Z2Z1	1910 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637	MYO3B	Q8WXR4	1341 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637		A0A0A6YYH2	397 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637		A6NJ64	397 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637		H3BQ85	93 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637	KLRC4-KLRK1	H3BQV0	150 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637		J3QLI3	93 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637	FGF16	O43320	207 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637	COCH	O43405	550 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637	MPZL2	O60487	215 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637	KLHL2	O95198	593 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637	PDYN	P01213	254 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637	F8A1	P23610	371 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637	MYL6	P60660	151 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637	FAM3A	P98173	230 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637	MMD	Q15546	238 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637	CDKL4	Q5MAI5	379 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637	ZNF660	Q6AZW8	331 aa	Predicted RBP	2.99	□□□□□ -1.93
USP33-217	ENST00000531637	PTRHD1	Q6GMV3	140 aa	Known RBP	2.99	□□□□□ -1.93
USP33-217	ENST00000531637	NIPAL1	Q6NVV3	410 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637	TTC33	Q6PID6	262 aa	Predicted RBP	2.99	□□□□□ -1.93
USP33-217	ENST00000531637	CLEC20A	Q6ZU45	233 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637	LYZL2	Q7Z4W2	148 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637	FER1L6-AS1	Q8NA97	138 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637	CMBL	Q96DG6	245 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637	SMIM12	Q96EX1	92 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637	FAM210A	Q96ND0	272 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637	DUSP21	Q9H596	190 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637	WDR54	Q9H977	334 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637	NAGK	Q9UJ70	344 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637	TRIP11	Q15643	1979 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637	ATRN	O75882	1429 aa		2.99	□□□□□ -1.93
USP33-217	ENST00000531637	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	2.99	□□□□□ -1.93
USP33-217	ENST00000531637	SCN4A	P35499	1836 aa		2.98	□□□□□ -1.93
USP33-217	ENST00000531637	BAZ1B	Q9UIG0	1483 aa	Known RBP	2.98	□□□□□ -1.93
USP33-217	ENST00000531637	IGKV2-24	A0A0C4DH68	120 aa		2.98	□□□□□ -1.93
USP33-217	ENST00000531637	ZNF729	A6NN14	1252 aa	Predicted RBP	2.98	□□□□□ -1.93
USP33-217	ENST00000531637	GPR171	O14626	319 aa		2.98	□□□□□ -1.93
USP33-217	ENST00000531637	CRTAP	O75718	401 aa	Predicted RBP	2.98	□□□□□ -1.93
USP33-217	ENST00000531637	ATP6V1G2	O95670	118 aa		2.98	□□□□□ -1.93
USP33-217	ENST00000531637	S100A6	P06703	90 aa		2.98	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms