RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 RSU1Q15404 277 aa12.55□□□□□ -0.4
CPSF1-205ENST00000531042 PIGYQ3MUY2 71 aa12.55□□□□□ -0.4
CPSF1-205ENST00000531042 C9orf152Q5JTZ5 239 aa12.55□□□□□ -0.4
CPSF1-205ENST00000531042 RSBN1Q5VWQ0 802 aaPredicted RBP12.55□□□□□ -0.4
CPSF1-205ENST00000531042 RPL22L1Q6P5R6 122 aaKnown RBP12.55□□□□□ -0.4
CPSF1-205ENST00000531042 OR4X2Q8NGF9 303 aa12.55□□□□□ -0.4
CPSF1-205ENST00000531042 PLPPR1Q8TBJ4 325 aa12.55□□□□□ -0.4
CPSF1-205ENST00000531042 LEAP2Q969E1 77 aa12.55□□□□□ -0.4
CPSF1-205ENST00000531042 TOMM40LQ969M1 308 aa12.55□□□□□ -0.4
CPSF1-205ENST00000531042 RPEQ96AT9 228 aa12.55□□□□□ -0.4
CPSF1-205ENST00000531042 S100A14Q9HCY8 104 aa12.55□□□□□ -0.4
CPSF1-205ENST00000531042 FGF20Q9NP95 211 aaPredicted RBP12.55□□□□□ -0.4
CPSF1-205ENST00000531042 TAS2R4Q9NYW5 299 aa12.55□□□□□ -0.4
CPSF1-205ENST00000531042 PSG11Q9UQ72 335 aa12.55□□□□□ -0.4
CPSF1-205ENST00000531042 HTR3BO95264 441 aa12.54□□□□□ -0.4
CPSF1-205ENST00000531042 PF4P02776 101 aa12.54□□□□□ -0.4
CPSF1-205ENST00000531042 SNRNP70P08621 437 aaKnown RBP12.54□□□□□ -0.4
CPSF1-205ENST00000531042 CCDC58Q4VC31 144 aa12.54□□□□□ -0.4
CPSF1-205ENST00000531042 XAF1Q6GPH4 301 aa12.54□□□□□ -0.4
CPSF1-205ENST00000531042 MRGPRDQ8TDS7 321 aa12.54□□□□□ -0.4
CPSF1-205ENST00000531042 GPR148Q8TDV2 347 aa12.54□□□□□ -0.4
CPSF1-205ENST00000531042 FAM192AQ9GZU8 254 aa12.54□□□□□ -0.4
CPSF1-205ENST00000531042 MOB4Q9Y3A3 225 aa12.54□□□□□ -0.4
CPSF1-205ENST00000531042 HSPE1-MOB4S4R3N1 261 aa12.54□□□□□ -0.4
CPSF1-205ENST00000531042 A0A1W2PPI3 338 aa12.53□□□□□ -0.4
CPSF1-205ENST00000531042 WBP4O75554 376 aaKnown RBP12.53□□□□□ -0.4
CPSF1-205ENST00000531042 CDRT1O95170 752 aa12.53□□□□□ -0.4
CPSF1-205ENST00000531042 CD2P06729 351 aa12.53□□□□□ -0.4
CPSF1-205ENST00000531042 SSTR5P35346 364 aa12.53□□□□□ -0.4
CPSF1-205ENST00000531042 ETV1P50549 477 aa12.53□□□□□ -0.4
CPSF1-205ENST00000531042 MADCAM1Q13477 382 aa12.53□□□□□ -0.4
CPSF1-205ENST00000531042 DIAPH2-AS1Q14236 149 aa12.53□□□□□ -0.4
CPSF1-205ENST00000531042 SMN1Q16637 294 aaKnown RBP12.53□□□□□ -0.4
CPSF1-205ENST00000531042 LTC4SQ16873 150 aa12.53□□□□□ -0.4
CPSF1-205ENST00000531042 SLC16A12Q6ZSM3 486 aa12.53□□□□□ -0.4
CPSF1-205ENST00000531042 OSR2Q8N2R0 312 aa12.53□□□□□ -0.4
CPSF1-205ENST00000531042 PQLC1Q8N2U9 271 aa12.53□□□□□ -0.4
CPSF1-205ENST00000531042 DRAM1Q8N682 238 aa12.53□□□□□ -0.4
CPSF1-205ENST00000531042 OR10A7Q8NGE5 316 aa12.53□□□□□ -0.4
CPSF1-205ENST00000531042 OR56B4Q8NH76 319 aa12.53□□□□□ -0.4
CPSF1-205ENST00000531042 RFESDQ8TAC1 157 aa12.53□□□□□ -0.4
CPSF1-205ENST00000531042 TMEM106AQ96A25 262 aa12.53□□□□□ -0.4
CPSF1-205ENST00000531042 DPCDQ9BVM2 203 aaPredicted RBP12.53□□□□□ -0.4
CPSF1-205ENST00000531042 IFT22Q9H7X7 185 aa12.53□□□□□ -0.4
CPSF1-205ENST00000531042 IL36GQ9NZH8 169 aa12.53□□□□□ -0.4
CPSF1-205ENST00000531042 ZNF581Q9P0T4 197 aa12.53□□□□□ -0.4
CPSF1-205ENST00000531042 ING4Q9UNL4 249 aa12.53□□□□□ -0.4
CPSF1-205ENST00000531042 ST3GAL6Q9Y274 331 aa12.53□□□□□ -0.4
CPSF1-205ENST00000531042 TRAV39A0A0B4J263 110 aa12.52□□□□□ -0.41
CPSF1-205ENST00000531042 GNG10P50151 68 aa12.52□□□□□ -0.41
CPSF1-205ENST00000531042 RAB7AP51149 207 aa12.52□□□□□ -0.41
CPSF1-205ENST00000531042 SLC35A2P78381 396 aa12.52□□□□□ -0.41
CPSF1-205ENST00000531042 NHLRC3Q5JS37 347 aa12.52□□□□□ -0.41
CPSF1-205ENST00000531042 KHDC1LQ5JSQ8 128 aa12.52□□□□□ -0.41
CPSF1-205ENST00000531042 OR2G6Q5TZ20 316 aa12.52□□□□□ -0.41
CPSF1-205ENST00000531042 SUMF2Q8NBJ7 301 aa12.52□□□□□ -0.41
CPSF1-205ENST00000531042 METTL9Q9H1A3 318 aa12.52□□□□□ -0.41
CPSF1-205ENST00000531042 TMEM138Q9NPI0 162 aa12.52□□□□□ -0.41
CPSF1-205ENST00000531042 RRP15Q9Y3B9 282 aaKnown RBP12.52□□□□□ -0.41
CPSF1-205ENST00000531042 PSMB11A5LHX3 300 aa12.51□□□□□ -0.41
CPSF1-205ENST00000531042 DCKP27707 260 aa12.51□□□□□ -0.41
CPSF1-205ENST00000531042 ZNF93P35789 620 aaPredicted RBP12.51□□□□□ -0.41
CPSF1-205ENST00000531042 RBM11P57052 281 aaKnown RBP12.51□□□□□ -0.41
CPSF1-205ENST00000531042 PPP3R1P63098 170 aa12.51□□□□□ -0.41
CPSF1-205ENST00000531042 HES1Q14469 280 aa12.51□□□□□ -0.41
CPSF1-205ENST00000531042 DDI2Q5TDH0 399 aa12.51□□□□□ -0.41
CPSF1-205ENST00000531042 TMPRSS11AQ6ZMR5 421 aa12.51□□□□□ -0.41
CPSF1-205ENST00000531042 OR8H3Q8N146 312 aa12.51□□□□□ -0.41
CPSF1-205ENST00000531042 C5orf56Q8N8D9 126 aa12.51□□□□□ -0.41
CPSF1-205ENST00000531042 ZNF555Q8NEP9 628 aa12.51□□□□□ -0.41
CPSF1-205ENST00000531042 OR52N1Q8NH53 320 aa12.51□□□□□ -0.41
CPSF1-205ENST00000531042 RCC1LQ96I51 464 aaKnown RBP12.51□□□□□ -0.41
CPSF1-205ENST00000531042 SIRT4Q9Y6E7 314 aaPredicted RBP12.51□□□□□ -0.41
CPSF1-205ENST00000531042 A0A1W2PPE3 182 aa12.5□□□□□ -0.41
CPSF1-205ENST00000531042 GEMIN2O14893 280 aaKnown RBP12.5□□□□□ -0.41
CPSF1-205ENST00000531042 OGG1O15527 345 aa12.5□□□□□ -0.41
CPSF1-205ENST00000531042 FGF16O43320 207 aa12.5□□□□□ -0.41
CPSF1-205ENST00000531042 OR7C1O76099 320 aaPredicted RBP12.5□□□□□ -0.41
CPSF1-205ENST00000531042 CSTBP04080 98 aaKnown RBP12.5□□□□□ -0.41
CPSF1-205ENST00000531042 TMEM11P17152 192 aa12.5□□□□□ -0.41
CPSF1-205ENST00000531042 GZMHP20718 246 aa12.5□□□□□ -0.41
CPSF1-205ENST00000531042 BDKRB2P30411 391 aa12.5□□□□□ -0.41
CPSF1-205ENST00000531042 HNF4GQ14541 408 aa12.5□□□□□ -0.41
CPSF1-205ENST00000531042 ZNF329Q86UD4 541 aa12.5□□□□□ -0.41
CPSF1-205ENST00000531042 OR10X1Q8NGY0 326 aa12.5□□□□□ -0.41
CPSF1-205ENST00000531042 ORAI1Q96D31 301 aa12.5□□□□□ -0.41
CPSF1-205ENST00000531042 SMIM19Q96E16 107 aa12.5□□□□□ -0.41
CPSF1-205ENST00000531042 RDH12Q96NR8 316 aa12.5□□□□□ -0.41
CPSF1-205ENST00000531042 BABAM2Q9NXR7 383 aa12.5□□□□□ -0.41
CPSF1-205ENST00000531042 SMPD3Q9NY59 655 aaPredicted RBP12.5□□□□□ -0.41
CPSF1-205ENST00000531042 ZNF281Q9Y2X9 895 aa12.5□□□□□ -0.41
CPSF1-205ENST00000531042 COL7A1Q02388 2944 aa12.49□□□□□ -0.41
CPSF1-205ENST00000531042 TMEM30CPA0ZSE6 113 aa12.49□□□□□ -0.41
CPSF1-205ENST00000531042 DUS4LO95620 317 aaKnown RBP12.49□□□□□ -0.41
CPSF1-205ENST00000531042 CLIC3O95833 236 aa12.49□□□□□ -0.41
CPSF1-205ENST00000531042 MPIG6BO95866 241 aa12.49□□□□□ -0.41
CPSF1-205ENST00000531042 IGKV1D-33P01593 117 aa12.49□□□□□ -0.41
CPSF1-205ENST00000531042 IGKV1-33P01594 117 aa12.49□□□□□ -0.41
CPSF1-205ENST00000531042 IGFBP3P17936 291 aaPredicted RBP12.49□□□□□ -0.41
CPSF1-205ENST00000531042 SERPINA2P20848 420 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms