RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 C16orf97H3BN30 126 aa7.42□□□□□ -1.22
CTNND1-227ENST00000530748 GNG7O60262 68 aa7.42□□□□□ -1.22
CTNND1-227ENST00000530748 SPINK4O60575 86 aa7.42□□□□□ -1.22
CTNND1-227ENST00000530748 PTP4A3O75365 173 aa7.42□□□□□ -1.22
CTNND1-227ENST00000530748 HPXP02790 462 aa7.42□□□□□ -1.22
CTNND1-227ENST00000530748 TMEM50BP56557 158 aa7.42□□□□□ -1.22
CTNND1-227ENST00000530748 PNRC1Q12796 327 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-227ENST00000530748 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.42□□□□□ -1.22
CTNND1-227ENST00000530748 NEURL2Q9BR09 285 aa7.42□□□□□ -1.22
CTNND1-227ENST00000530748 MIXL1Q9H2W2 232 aa7.42□□□□□ -1.22
CTNND1-227ENST00000530748 SLC25A10Q9UBX3 287 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-227ENST00000530748 DTX4Q9Y2E6 619 aa7.42□□□□□ -1.22
CTNND1-227ENST00000530748 OR51B2Q9Y5P1 312 aa7.42□□□□□ -1.22
CTNND1-227ENST00000530748 IGSF23A1L1A6 192 aa7.42□□□□□ -1.22
CTNND1-227ENST00000530748 PATE3B3GLJ2 98 aa7.42□□□□□ -1.22
CTNND1-227ENST00000530748 ADAM11O75078 769 aa7.42□□□□□ -1.22
CTNND1-227ENST00000530748 PITX3O75364 302 aa7.42□□□□□ -1.22
CTNND1-227ENST00000530748 WISP3O95389 354 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-227ENST00000530748 OR5AL1P0C617 328 aa7.42□□□□□ -1.22
CTNND1-227ENST00000530748 ERVS71-1P61550 626 aa7.42□□□□□ -1.22
CTNND1-227ENST00000530748 TSPO2Q5TGU0 170 aa7.42□□□□□ -1.22
CTNND1-227ENST00000530748 SLC22A18ASQ8N1D0 253 aa7.42□□□□□ -1.22
CTNND1-227ENST00000530748 TMEM52Q8NDY8 209 aa7.42□□□□□ -1.22
CTNND1-227ENST00000530748 ZNF501Q96CX3 271 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-227ENST00000530748 LOXL4Q96JB6 756 aa7.42□□□□□ -1.22
CTNND1-227ENST00000530748 FAM210BQ96KR6 192 aa7.42□□□□□ -1.22
CTNND1-227ENST00000530748 C11orf94C9JXX5 98 aa7.42□□□□□ -1.22
CTNND1-227ENST00000530748 ACAA2P42765 397 aaKnown RBP7.42□□□□□ -1.22
CTNND1-227ENST00000530748 EWSR1Q01844 656 aaKnown RBP eCLIP7.42□□□□□ -1.22
CTNND1-227ENST00000530748 SEC11CQ9BY50 192 aa7.42□□□□□ -1.22
CTNND1-227ENST00000530748 LYRM2Q9NU23 88 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-227ENST00000530748 MRPS18AQ9NVS2 196 aaKnown RBP7.42□□□□□ -1.22
CTNND1-227ENST00000530748 ELOA3CA0A087WX78 387 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-227ENST00000530748 SPAARA0A1B0GVQ0 90 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 A0A1W2PNV4 684 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 MED19A0JLT2 244 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-227ENST00000530748 FAM157AC9JC47 383 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 CXorf1O96002 111 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 HOXD4P09016 255 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-227ENST00000530748 MMP7P09237 267 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-227ENST00000530748 SULT1A1P50225 295 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 SEZ6L2Q6UXD5 910 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 TGIF2LYQ8IUE0 185 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 FAM219AQ8IW50 185 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 Q8WTZ3 238 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 KLK13Q9UKR3 277 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 WIPI2Q9Y4P8 454 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 B4DEV8 164 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 CA11O75493 328 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 ADAP1O75689 374 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 PSG2P11465 335 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 ID1P41134 155 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 RBM11P57052 281 aaKnown RBP7.41□□□□□ -1.22
CTNND1-227ENST00000530748 PSG5Q15238 335 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 HOGA1Q86XE5 327 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 OR4D10Q8NGI6 311 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 OR4P4Q8NGL7 312 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 ZNF596Q8TC21 504 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 TMEM37Q8WXS4 190 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 ABHD14AQ9BUJ0 271 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 RAB33BQ9H082 229 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 MS4A5Q9H3V2 200 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 GSX1Q9H4S2 264 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-227ENST00000530748 UFC1Q9Y3C8 167 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 COL4A1P02462 1669 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 OR4C45A6NMZ5 311 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 SRSF10O75494 262 aaKnown RBP7.41□□□□□ -1.22
CTNND1-227ENST00000530748 LSM11P83369 360 aaKnown RBP eCLIP7.41□□□□□ -1.22
CTNND1-227ENST00000530748 ANKRD55Q3KP44 614 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 FAM74A3Q4VXF1 159 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 PTX4Q96A99 478 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 SBF2Q86WG5 1849 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 M0R2Z0 102 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 SYNGR1O43759 233 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 P01737 135 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 CRHP06850 196 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 RPS4XP62701 263 aaKnown RBP7.41□□□□□ -1.22
CTNND1-227ENST00000530748 RPL30P62888 115 aaKnown RBP7.41□□□□□ -1.22
CTNND1-227ENST00000530748 RIGQ13278 110 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 TCTEX1D1Q8N7M0 179 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 DYRK2Q92630 601 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 MRPL24Q96A35 216 aaKnown RBP7.41□□□□□ -1.22
CTNND1-227ENST00000530748 INSIG2Q9Y5U4 225 aa7.41□□□□□ -1.22
CTNND1-227ENST00000530748 CCL21O00585 134 aa7.4□□□□□ -1.22
CTNND1-227ENST00000530748 ASAH2BP0C7U1 165 aa7.4□□□□□ -1.22
CTNND1-227ENST00000530748 RD3LP0DJH9 198 aa7.4□□□□□ -1.22
CTNND1-227ENST00000530748 SPINK2P20155 84 aa7.4□□□□□ -1.22
CTNND1-227ENST00000530748 EIF4EBP2Q13542 120 aaPredicted RBP7.4□□□□□ -1.22
CTNND1-227ENST00000530748 KRTCAP3Q53RY4 240 aa7.4□□□□□ -1.22
CTNND1-227ENST00000530748 TEX30Q5JUR7 227 aa7.4□□□□□ -1.22
CTNND1-227ENST00000530748 FADS6Q8N9I5 356 aa7.4□□□□□ -1.22
CTNND1-227ENST00000530748 DCAF16Q9NXF7 216 aa7.4□□□□□ -1.22
CTNND1-227ENST00000530748 LIPGQ9Y5X9 500 aa7.4□□□□□ -1.22
CTNND1-227ENST00000530748 HIST1H1EP10412 219 aaKnown RBP7.4□□□□□ -1.22
CTNND1-227ENST00000530748 ERGP11308 486 aa7.4□□□□□ -1.22
CTNND1-227ENST00000530748 PMS2P11Q13670 270 aa7.4□□□□□ -1.22
CTNND1-227ENST00000530748 C16orf82Q7Z2V1 217 aa7.4□□□□□ -1.22
CTNND1-227ENST00000530748 C5orf17Q8NAS9 161 aa7.4□□□□□ -1.22
CTNND1-227ENST00000530748 LILRB1Q8NHL6 650 aaPredicted RBP7.4□□□□□ -1.22
CTNND1-227ENST00000530748 ADAT3Q96EY9 351 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms