RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 THNSL2Q86YJ6 484 aa16.64■□□□□ 0.25
SMPD1-204ENST00000530395 Q8NFD4 153 aa16.64■□□□□ 0.25
SMPD1-204ENST00000530395 OR10A7Q8NGE5 316 aa16.64■□□□□ 0.25
SMPD1-204ENST00000530395 MRGPRDQ8TDS7 321 aa16.64■□□□□ 0.25
SMPD1-204ENST00000530395 RGP1Q92546 391 aaPredicted RBP16.64■□□□□ 0.25
SMPD1-204ENST00000530395 TMEM106AQ96A25 262 aa16.64■□□□□ 0.25
SMPD1-204ENST00000530395 LINC00574Q9H8X3 128 aa16.64■□□□□ 0.25
SMPD1-204ENST00000530395 AURKAIP1Q9NWT8 199 aaPredicted RBP16.64■□□□□ 0.25
SMPD1-204ENST00000530395 IRGMA1A4Y4 181 aa16.63■□□□□ 0.25
SMPD1-204ENST00000530395 IGLL1P15814 213 aa16.63■□□□□ 0.25
SMPD1-204ENST00000530395 RAB7AP51149 207 aa16.63■□□□□ 0.25
SMPD1-204ENST00000530395 SLC35A2P78381 396 aa16.63■□□□□ 0.25
SMPD1-204ENST00000530395 LTC4SQ16873 150 aa16.63■□□□□ 0.25
SMPD1-204ENST00000530395 UTF1Q5T230 341 aa16.63■□□□□ 0.25
SMPD1-204ENST00000530395 ASCL4Q6XD76 172 aa16.63■□□□□ 0.25
SMPD1-204ENST00000530395 SLC16A12Q6ZSM3 486 aa16.63■□□□□ 0.25
SMPD1-204ENST00000530395 OR56B4Q8NH76 319 aa16.63■□□□□ 0.25
SMPD1-204ENST00000530395 PLPPR1Q8TBJ4 325 aa16.63■□□□□ 0.25
SMPD1-204ENST00000530395 LEAP2Q969E1 77 aa16.63■□□□□ 0.25
SMPD1-204ENST00000530395 RDH12Q96NR8 316 aa16.63■□□□□ 0.25
SMPD1-204ENST00000530395 S100A13Q99584 98 aa16.63■□□□□ 0.25
SMPD1-204ENST00000530395 DPCDQ9BVM2 203 aaPredicted RBP16.63■□□□□ 0.25
SMPD1-204ENST00000530395 METTL9Q9H1A3 318 aa16.63■□□□□ 0.25
SMPD1-204ENST00000530395 TMEM138Q9NPI0 162 aa16.63■□□□□ 0.25
SMPD1-204ENST00000530395 PSG11Q9UQ72 335 aa16.63■□□□□ 0.25
SMPD1-204ENST00000530395 ST3GAL6Q9Y274 331 aa16.63■□□□□ 0.25
SMPD1-204ENST00000530395 FAM90A18PA6NE21 464 aa16.62■□□□□ 0.25
SMPD1-204ENST00000530395 FAM90A16PA6NEW6 464 aa16.62■□□□□ 0.25
SMPD1-204ENST00000530395 FAM90A20PA6NIJ5 464 aa16.62■□□□□ 0.25
SMPD1-204ENST00000530395 FAM90A9PA6NNJ1 464 aa16.62■□□□□ 0.25
SMPD1-204ENST00000530395 FAM90A12PA8MX19 464 aa16.62■□□□□ 0.25
SMPD1-204ENST00000530395 FAM90A5PA8MXJ8 464 aa16.62■□□□□ 0.25
SMPD1-204ENST00000530395 NPIPB11E5RHQ5 1161 aa16.62■□□□□ 0.25
SMPD1-204ENST00000530395 OR7C1O76099 320 aaPredicted RBP16.62■□□□□ 0.25
SMPD1-204ENST00000530395 IGHV3-7P01780 117 aa16.62■□□□□ 0.25
SMPD1-204ENST00000530395 CSTBP04080 98 aaKnown RBP16.62■□□□□ 0.25
SMPD1-204ENST00000530395 SNRNP70P08621 437 aaKnown RBP16.62■□□□□ 0.25
SMPD1-204ENST00000530395 FAM90A15PP0C7V4 464 aa16.62■□□□□ 0.25
SMPD1-204ENST00000530395 FAM90A13PP0C7W8 464 aa16.62■□□□□ 0.25
SMPD1-204ENST00000530395 FAM90A14PP0C7W9 464 aa16.62■□□□□ 0.25
SMPD1-204ENST00000530395 FAM90A24PP0C7X0 464 aa16.62■□□□□ 0.25
SMPD1-204ENST00000530395 DCKP27707 260 aa16.62■□□□□ 0.25
SMPD1-204ENST00000530395 ZNF93P35789 620 aaPredicted RBP16.62■□□□□ 0.25
SMPD1-204ENST00000530395 GNG10P50151 68 aa16.62■□□□□ 0.25
SMPD1-204ENST00000530395 HES1Q14469 280 aa16.62■□□□□ 0.25
SMPD1-204ENST00000530395 DDI2Q5TDH0 399 aa16.62■□□□□ 0.25
SMPD1-204ENST00000530395 FOXB2Q5VYV0 432 aa16.62■□□□□ 0.25
SMPD1-204ENST00000530395 LINC00596Q86U02 117 aa16.62■□□□□ 0.25
SMPD1-204ENST00000530395 OR8H3Q8N146 312 aa16.62■□□□□ 0.25
SMPD1-204ENST00000530395 OSR2Q8N2R0 312 aa16.62■□□□□ 0.25
SMPD1-204ENST00000530395 SUMF2Q8NBJ7 301 aa16.62■□□□□ 0.25
SMPD1-204ENST00000530395 OR10X1Q8NGY0 326 aa16.62■□□□□ 0.25
SMPD1-204ENST00000530395 RFESDQ8TAC1 157 aa16.62■□□□□ 0.25
SMPD1-204ENST00000530395 IFT22Q9H7X7 185 aa16.62■□□□□ 0.25
SMPD1-204ENST00000530395 PAK1IP1Q9NWT1 392 aaPredicted RBP16.62■□□□□ 0.25
SMPD1-204ENST00000530395 SMPD3Q9NY59 655 aaPredicted RBP16.62■□□□□ 0.25
SMPD1-204ENST00000530395 IL36GQ9NZH8 169 aa16.62■□□□□ 0.25
SMPD1-204ENST00000530395 ING4Q9UNL4 249 aa16.62■□□□□ 0.25
SMPD1-204ENST00000530395 PSMB11A5LHX3 300 aa16.61■□□□□ 0.25
SMPD1-204ENST00000530395 CDRT1O95170 752 aa16.61■□□□□ 0.25
SMPD1-204ENST00000530395 TMEM11P17152 192 aa16.61■□□□□ 0.25
SMPD1-204ENST00000530395 MYL12AP19105 171 aa16.61■□□□□ 0.25
SMPD1-204ENST00000530395 SSTR5P35346 364 aa16.61■□□□□ 0.25
SMPD1-204ENST00000530395 ETV1P50549 477 aa16.61■□□□□ 0.25
SMPD1-204ENST00000530395 SMN1Q16637 294 aaKnown RBP16.61■□□□□ 0.25
SMPD1-204ENST00000530395 NHLRC3Q5JS37 347 aa16.61■□□□□ 0.25
SMPD1-204ENST00000530395 XAF1Q6GPH4 301 aa16.61■□□□□ 0.25
SMPD1-204ENST00000530395 DRAM1Q8N682 238 aa16.61■□□□□ 0.25
SMPD1-204ENST00000530395 A0A1W2PPI3 338 aa16.6■□□□□ 0.25
SMPD1-204ENST00000530395 TMEM30CPA0ZSE6 113 aa16.6■□□□□ 0.25
SMPD1-204ENST00000530395 WBP4O75554 376 aaKnown RBP16.6■□□□□ 0.25
SMPD1-204ENST00000530395 BDKRB2P30411 391 aa16.6■□□□□ 0.25
SMPD1-204ENST00000530395 RBM11P57052 281 aaKnown RBP16.6■□□□□ 0.25
SMPD1-204ENST00000530395 OR2G6Q5TZ20 316 aa16.6■□□□□ 0.25
SMPD1-204ENST00000530395 OR52N1Q8NH53 320 aa16.6■□□□□ 0.25
SMPD1-204ENST00000530395 SMIM19Q96E16 107 aa16.6■□□□□ 0.25
SMPD1-204ENST00000530395 RCC1LQ96I51 464 aaKnown RBP16.6■□□□□ 0.25
SMPD1-204ENST00000530395 ZNF281Q9Y2X9 895 aa16.6■□□□□ 0.25
SMPD1-204ENST00000530395 FGF16O43320 207 aa16.59■□□□□ 0.25
SMPD1-204ENST00000530395 ZNF780AO75290 641 aaPredicted RBP16.59■□□□□ 0.25
SMPD1-204ENST00000530395 DUS4LO95620 317 aaKnown RBP16.59■□□□□ 0.25
SMPD1-204ENST00000530395 BAG2O95816 211 aa16.59■□□□□ 0.25
SMPD1-204ENST00000530395 GZMHP20718 246 aa16.59■□□□□ 0.25
SMPD1-204ENST00000530395 SERPINA2P20848 420 aa16.59■□□□□ 0.25
SMPD1-204ENST00000530395 MED21Q13503 144 aa16.59■□□□□ 0.25
SMPD1-204ENST00000530395 C10orf99Q6UWK7 81 aa16.59■□□□□ 0.25
SMPD1-204ENST00000530395 BABAM2Q9NXR7 383 aa16.59■□□□□ 0.25
SMPD1-204ENST00000530395 CKLFQ9UBR5 152 aa16.59■□□□□ 0.25
SMPD1-204ENST00000530395 EXOSC1Q9Y3B2 195 aaKnown RBP16.59■□□□□ 0.25
SMPD1-204ENST00000530395 TRAV39A0A0B4J263 110 aa16.58■□□□□ 0.24
SMPD1-204ENST00000530395 GEMIN2O14893 280 aaKnown RBP16.58■□□□□ 0.24
SMPD1-204ENST00000530395 RIPK1Q13546 671 aa16.58■□□□□ 0.24
SMPD1-204ENST00000530395 MPV17LQ2QL34 196 aa16.58■□□□□ 0.24
SMPD1-204ENST00000530395 ATAD3CQ5T2N8 411 aa16.58■□□□□ 0.24
SMPD1-204ENST00000530395 C5orf56Q8N8D9 126 aa16.58■□□□□ 0.24
SMPD1-204ENST00000530395 OR51D1Q8NGF3 324 aa16.58■□□□□ 0.24
SMPD1-204ENST00000530395 NEK7Q8TDX7 302 aa16.58■□□□□ 0.24
SMPD1-204ENST00000530395 CHPT1Q8WUD6 406 aa16.58■□□□□ 0.24
SMPD1-204ENST00000530395 CHCHD3Q9NX63 227 aaKnown RBP16.58■□□□□ 0.24
SMPD1-204ENST00000530395 DIMT1Q9UNQ2 313 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms