RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 PLPP3O14495 311 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 RPS23P62266 143 aaKnown RBP6.72□□□□□ -1.33
CTNND1-223ENST00000529986 ZNF345Q14585 488 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 ATP6V1FQ16864 119 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 VMA21Q3ZAQ7 101 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 C6orf15Q6UXA7 325 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-223ENST00000529986 PDPNQ86YL7 162 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 OR1N1Q8NGS0 311 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 MFRPQ9BY79 579 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 GAL3ST2Q9H3Q3 398 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 IL36GQ9NZH8 169 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 RECKO95980 971 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 FGF2P09038 288 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 SEC11BP0C7V7 166 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 COL8A1P27658 744 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 MDH2P40926 338 aaKnown RBP6.72□□□□□ -1.33
CTNND1-223ENST00000529986 OR1P1Q8NH06 330 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 PHF7Q9BWX1 381 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-223ENST00000529986 HSPB8Q9UJY1 196 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 TTC3P53804 2025 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 DNAJC13O75165 2243 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 A0A1W2PRD5 423 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 A0A1W2PRF3 423 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 A0A1W2PRM7 423 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 PNLIPP16233 465 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 WNT5AP41221 380 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 Q6ZNB5 142 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 LIMS2Q7Z4I7 341 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 ATOH7Q8N100 152 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 SPACA9Q96E40 222 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-223ENST00000529986 RBM14Q96PK6 669 aaKnown RBP6.72□□□□□ -1.33
CTNND1-223ENST00000529986 RARRES2Q99969 163 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 GGACTQ9BVM4 153 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 MAP1BP46821 2468 aaKnown RBP6.72□□□□□ -1.33
CTNND1-223ENST00000529986 ATAD5Q96QE3 1844 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 CXorf51AA0A1B0GTR3 108 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 SLC22A20A6NK97 555 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 OR4C45A6NMZ5 311 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 PPYP01298 95 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 AESQ08117 197 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 OR2M3Q8NG83 312 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 OR11G2Q8NGC1 345 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 ZNF707Q96C28 371 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-223ENST00000529986 TIMD4Q96H15 378 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 UBE2ZQ9H832 354 aaPredicted RBP6.72□□□□□ -1.33
CTNND1-223ENST00000529986 SLC52A3Q9NQ40 469 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 NPTNQ9Y639 398 aa6.72□□□□□ -1.33
CTNND1-223ENST00000529986 LOC105371267A0A1B0GV96 52 aa6.71□□□□□ -1.33
CTNND1-223ENST00000529986 H7C2G1 150 aa6.71□□□□□ -1.33
CTNND1-223ENST00000529986 CXCL10P02778 98 aa6.71□□□□□ -1.33
CTNND1-223ENST00000529986 HOXD4P09016 255 aaPredicted RBP6.71□□□□□ -1.33
CTNND1-223ENST00000529986 APELAP0DMC3 54 aa6.71□□□□□ -1.33
CTNND1-223ENST00000529986 VSIG8P0DPA2 414 aa6.71□□□□□ -1.33
CTNND1-223ENST00000529986 VDAC1P21796 283 aa6.71□□□□□ -1.33
CTNND1-223ENST00000529986 CD82P27701 267 aa6.71□□□□□ -1.33
CTNND1-223ENST00000529986 SMAD4Q13485 552 aaKnown RBP6.71□□□□□ -1.33
CTNND1-223ENST00000529986 PIGYQ3MUY2 71 aa6.71□□□□□ -1.33
CTNND1-223ENST00000529986 R3HDM4Q96D70 268 aa6.71□□□□□ -1.33
CTNND1-223ENST00000529986 MRGPRX1Q96LB2 322 aa6.71□□□□□ -1.33
CTNND1-223ENST00000529986 RSG1Q9BU20 258 aa6.71□□□□□ -1.33
CTNND1-223ENST00000529986 C3orf80F5H4A9 247 aa6.71□□□□□ -1.33
CTNND1-223ENST00000529986 MT-CO3P00414 261 aa6.71□□□□□ -1.33
CTNND1-223ENST00000529986 DEGS2Q6QHC5 323 aa6.71□□□□□ -1.33
CTNND1-223ENST00000529986 ZNF841Q6ZN19 808 aa6.71□□□□□ -1.33
CTNND1-223ENST00000529986 ZNF547Q8IVP9 402 aa6.71□□□□□ -1.33
CTNND1-223ENST00000529986 ASB5Q8WWX0 329 aa6.71□□□□□ -1.33
CTNND1-223ENST00000529986 MRPL37Q9BZE1 423 aaKnown RBP6.71□□□□□ -1.33
CTNND1-223ENST00000529986 TMEM167BQ9NRX6 74 aa6.71□□□□□ -1.33
CTNND1-223ENST00000529986 CACFD1Q9UGQ2 172 aa6.71□□□□□ -1.33
CTNND1-223ENST00000529986 TRDCB7Z8K6 153 aa6.71□□□□□ -1.34
CTNND1-223ENST00000529986 SMPD2O60906 423 aa6.71□□□□□ -1.34
CTNND1-223ENST00000529986 HOXB1P14653 301 aaPredicted RBP6.71□□□□□ -1.34
CTNND1-223ENST00000529986 BRS3P32247 399 aa6.71□□□□□ -1.34
CTNND1-223ENST00000529986 TMEM50BP56557 158 aa6.71□□□□□ -1.34
CTNND1-223ENST00000529986 Q5PR19 223 aa6.71□□□□□ -1.34
CTNND1-223ENST00000529986 WDFY1Q8IWB7 410 aa6.71□□□□□ -1.34
CTNND1-223ENST00000529986 ZPLD1Q8TCW7 415 aa6.71□□□□□ -1.34
CTNND1-223ENST00000529986 MTCH2Q9Y6C9 303 aa6.71□□□□□ -1.34
CTNND1-223ENST00000529986 TRBV5-3A0A0A0MS03 114 aa6.71□□□□□ -1.34
CTNND1-223ENST00000529986 ADAM11O75078 769 aa6.71□□□□□ -1.34
CTNND1-223ENST00000529986 CYB5R3P00387 301 aaPredicted RBP6.71□□□□□ -1.34
CTNND1-223ENST00000529986 PSG2P11465 335 aa6.71□□□□□ -1.34
CTNND1-223ENST00000529986 GCSHP23434 173 aa6.71□□□□□ -1.34
CTNND1-223ENST00000529986 MPLP40238 635 aa6.71□□□□□ -1.34
CTNND1-223ENST00000529986 DSCR4P56555 118 aaPredicted RBP6.71□□□□□ -1.34
CTNND1-223ENST00000529986 NANOS3P60323 173 aaKnown RBP6.71□□□□□ -1.34
CTNND1-223ENST00000529986 IGFBP7Q16270 282 aa6.71□□□□□ -1.34
CTNND1-223ENST00000529986 CLN8Q9UBY8 286 aa6.71□□□□□ -1.34
CTNND1-223ENST00000529986 DMRT1Q9Y5R6 373 aa6.71□□□□□ -1.34
CTNND1-223ENST00000529986 MRPS18BQ9Y676 258 aaKnown RBP6.71□□□□□ -1.34
CTNND1-223ENST00000529986 ANKRD31Q8N7Z5 1873 aa6.71□□□□□ -1.34
CTNND1-223ENST00000529986 IL2RAP01589 272 aa6.71□□□□□ -1.34
CTNND1-223ENST00000529986 FOXO1Q12778 655 aa6.71□□□□□ -1.34
CTNND1-223ENST00000529986 FZD5Q13467 585 aa6.71□□□□□ -1.34
CTNND1-223ENST00000529986 ANKRD55Q3KP44 614 aa6.71□□□□□ -1.34
CTNND1-223ENST00000529986 KHDC3LQ587J8 217 aa6.71□□□□□ -1.34
CTNND1-223ENST00000529986 DMRTA1Q5VZB9 504 aa6.71□□□□□ -1.34
CTNND1-223ENST00000529986 LEMD1Q68G75 181 aa6.71□□□□□ -1.34
CTNND1-223ENST00000529986 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.71□□□□□ -1.34
CTNND1-223ENST00000529986 ZAR1Q86SH2 424 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms