RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 PECRQ9BY49 303 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 MS4A7Q9GZW8 240 aaPredicted RBP6.36□□□□□ -1.39
CTNND1-218ENST00000528232 RAB33BQ9H082 229 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 DNAJC4Q9NNZ3 241 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 OCIAD1Q9NX40 245 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 ST6GALNAC2Q9UJ37 374 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 TRAV17A0A0B4J275 112 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 IGHV5-10-1A0A0J9YXX1 117 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 C9orf170A2RU37 121 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 IFITM10A6NMD0 228 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 ANKRD36A6QL64 1941 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 GCM2O75603 506 aaPredicted RBP6.36□□□□□ -1.39
CTNND1-218ENST00000528232 ZNF32P17041 273 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 MMP16P51512 607 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 IL24Q13007 206 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 NHLRC3Q5JS37 347 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 C16orf47Q6ZP98 133 aaPredicted RBP6.36□□□□□ -1.39
CTNND1-218ENST00000528232 SPRED2Q7Z698 418 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 SLC22A18ASQ8N1D0 253 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 FBXL14Q8N1E6 418 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 OR8B12Q8NGG6 310 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 CT55Q8WUE5 264 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 KISS1RQ969F8 398 aaPredicted RBP6.36□□□□□ -1.39
CTNND1-218ENST00000528232 C2orf88Q9BSF0 95 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 OR6C3Q9NZP0 311 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 TCFL5Q9UL49 500 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 ZFP30Q9Y2G7 519 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 PAM16Q9Y3D7 125 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 TIMM9Q9Y5J7 89 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 ATP23Q9Y6H3 246 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 DSPPQ9NZW4 1301 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 SHISA7A6NL88 538 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 H3BQ15 152 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 HYAL3O43820 417 aaPredicted RBP6.36□□□□□ -1.39
CTNND1-218ENST00000528232 IGKV1D-16P01601 117 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 RAC3P60763 192 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 ERHP84090 104 aaKnown RBP6.36□□□□□ -1.39
CTNND1-218ENST00000528232 FUT5Q11128 374 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 SRSF5Q13243 272 aaKnown RBP6.36□□□□□ -1.39
CTNND1-218ENST00000528232 PLA1AQ53H76 456 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 BEND2Q8NDZ0 799 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 PIK3IP1Q96FE7 263 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 DTX4Q9Y2E6 619 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 TMEM30CPA0ZSE6 113 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 GALR2O43603 387 aaPredicted RBP6.36□□□□□ -1.39
CTNND1-218ENST00000528232 LIPFP07098 398 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 SMIM17P0DL12 118 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 GNB1P62873 340 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 DHRS2Q13268 280 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 SPATA45Q537H7 98 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 ZNF468Q5VIY5 522 aaPredicted RBP6.36□□□□□ -1.39
CTNND1-218ENST00000528232 TMEM91Q6ZNR0 172 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 C6orf201Q7Z4U5 140 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 MRGPRGQ86SM5 289 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 EDARADDQ8WWZ3 215 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 CLDN23Q96B33 292 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 R3HDM4Q96D70 268 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 SCARF2Q96GP6 870 aaPredicted RBP6.36□□□□□ -1.39
CTNND1-218ENST00000528232 ADAT1Q9BUB4 502 aaKnown RBP6.36□□□□□ -1.39
CTNND1-218ENST00000528232 SPANXCQ9NY87 97 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 PLA2G3Q9NZ20 509 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 KIAA1456Q9P272 454 aa6.36□□□□□ -1.39
CTNND1-218ENST00000528232 KIAA0100Q14667 2235 aaKnown RBP6.35□□□□□ -1.39
CTNND1-218ENST00000528232 ZNF253O75346 499 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 ARG1P05089 322 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 OR5AL1P0C617 328 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 RNF224P0DH78 156 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 HIST1H1BP16401 226 aaKnown RBP6.35□□□□□ -1.39
CTNND1-218ENST00000528232 ZNF17P17021 662 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 ARF6P62330 175 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 PRDX4Q13162 271 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 FAM169BQ8N8A8 192 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 OR11H7Q8NGC8 314 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 GALMQ96C23 342 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 TMEM204Q9BSN7 226 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 TNFSF18Q9UNG2 199 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 DOCK3Q8IZD9 2030 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 OR4C45A6NMZ5 311 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 A8MXK9 166 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 ISLRO14498 428 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 PDE6DO43924 150 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 COX7A2P2O60397 106 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 IAPPP10997 89 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 ZP4Q12836 540 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 PPP1R1AQ13522 171 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 CLEC18BQ6UXF7 455 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 LDLRAD3Q86YD5 345 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 COPS9Q8WXC6 57 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 BCL2L2Q92843 193 aaPredicted RBP6.35□□□□□ -1.39
CTNND1-218ENST00000528232 MRPS24Q96EL2 167 aaKnown RBP6.35□□□□□ -1.39
CTNND1-218ENST00000528232 HSPB7Q9UBY9 170 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 ZNF835Q9Y2P0 537 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 AMDHD2Q9Y303 409 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 NYNRINQ9P2P1 1898 aaKnown RBP6.35□□□□□ -1.39
CTNND1-218ENST00000528232 TRBV9A0A0B4J1U6 114 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 CENPVL1A0A0U1RR11 272 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 CDS2O95674 445 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 RECKO95980 971 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 AVPR2P30518 371 aa6.35□□□□□ -1.39
CTNND1-218ENST00000528232 C1QL3Q5VWW1 255 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms