RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 OR1K1Q8NGR3 316 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 PFN4Q8NHR9 129 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 FBXO17Q96EF6 278 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 WDR34Q96EX3 536 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 TMEM204Q9BSN7 226 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 GEMIN7Q9H840 131 aaKnown RBP6.42□□□□□ -1.38
CTNND1-216ENST00000527467 RCC2Q9P258 522 aaKnown RBP6.42□□□□□ -1.38
CTNND1-216ENST00000527467 TMSB15BA0A087X1C1 80 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 C7orf71A4D174 169 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 C5orf49A4QMS7 147 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 PROB1E7EW31 1015 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 H0YGG7 62 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 FURINP09958 794 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 SBK3P0C264 359 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 MMP9P14780 707 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 ATF1P18846 271 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 C2orf83Q53S99 150 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 SLC25A30Q5SVS4 291 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 RIPPLY2Q5TAB7 128 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 FAM71F2Q6NXP2 309 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 SYT8Q8NBV8 401 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 PDLIM5Q96HC4 596 aaKnown RBP6.42□□□□□ -1.38
CTNND1-216ENST00000527467 MS4A3Q96HJ5 214 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 ATOH8Q96SQ7 321 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 WNT5BQ9H1J7 359 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 CXorf36Q9H7Y0 433 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 ARAP2Q8WZ64 1704 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 MYH10P35580 1976 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 SIPA1L3O60292 1781 aaPredicted RBP6.42□□□□□ -1.38
CTNND1-216ENST00000527467 TRAV8-4A0A0B4J246 113 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 J3KRW8 73 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 OR4A8P0C604 315 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 MICBQ29980 383 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 Q6ZS52 159 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 TCF23Q7RTU1 214 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 ANKRD37Q7Z713 158 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 MGST2Q99735 147 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 DNAJB12Q9NXW2 375 aaKnown RBP6.42□□□□□ -1.38
CTNND1-216ENST00000527467 TBL2Q9Y4P3 447 aaKnown RBP6.42□□□□□ -1.38
CTNND1-216ENST00000527467 CTXND1A0A1B0GTU2 59 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 K7ESF4 209 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 TRGC2P03986 189 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 OTX1P32242 354 aaPredicted RBP6.42□□□□□ -1.38
CTNND1-216ENST00000527467 PPIAP62937 165 aaKnown RBP6.42□□□□□ -1.38
CTNND1-216ENST00000527467 GSG1Q2KHT4 349 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 HFEQ30201 348 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 TMEM65Q6PI78 240 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 OR52N5Q8NH56 324 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 VSTM2AQ8TAG5 236 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 PP6455Q8WZ26 134 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 HCSTQ9UBK5 93 aa6.42□□□□□ -1.38
CTNND1-216ENST00000527467 IGHV3-64DA0A0J9YX35 117 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 TMEM189A5PLL7 270 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 RBMY1BA6NDE4 496 aaKnown RBP6.41□□□□□ -1.38
CTNND1-216ENST00000527467 RBMY1EA6NEQ0 496 aaKnown RBP6.41□□□□□ -1.38
CTNND1-216ENST00000527467 ZAR1LA6NP61 321 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 PPP6CO00743 305 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 RBMY1DP0C7P1 496 aaKnown RBP6.41□□□□□ -1.38
CTNND1-216ENST00000527467 RBMY1A1P0DJD3 496 aaKnown RBP6.41□□□□□ -1.38
CTNND1-216ENST00000527467 RBMY1CP0DJD4 496 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 GPX2P18283 190 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 CEACAM6P40199 344 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 SURF2Q15527 256 aaPredicted RBP6.41□□□□□ -1.38
CTNND1-216ENST00000527467 PSMG4Q5JS54 123 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 TMEM207Q6UWW9 146 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 OR10V1Q8NGI7 309 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 OR1L8Q8NGR8 309 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 ERRFI1Q9UJM3 462 aaPredicted RBP6.41□□□□□ -1.38
CTNND1-216ENST00000527467 CYSLTR1Q9Y271 337 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 BAZ2BQ9UIF8 2168 aaKnown RBP6.41□□□□□ -1.38
CTNND1-216ENST00000527467 HCRTO43612 131 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 C5orf30Q96GV9 206 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 MRGPRX1Q96LB2 322 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 EMC6Q9BV81 110 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 EMCNQ9ULC0 261 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 SCN9AQ15858 1988 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 IGHV1OR15-9A0A0B4J2B8 117 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 SMAD6O43541 496 aaKnown RBP6.41□□□□□ -1.38
CTNND1-216ENST00000527467 IGHV3-9P01782 118 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 MC5RP33032 325 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 C10orf113Q5VZT2 155 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 ZNF770Q6IQ21 691 aaPredicted RBP6.41□□□□□ -1.38
CTNND1-216ENST00000527467 SLC36A1Q7Z2H8 476 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 LYG1Q8N1E2 194 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 OR10D3Q8NH80 312 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 MS4A7Q9GZW8 240 aaPredicted RBP6.41□□□□□ -1.38
CTNND1-216ENST00000527467 SLC25A19Q9HC21 320 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 SLC52A3Q9NQ40 469 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 MTFP1Q9UDX5 166 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 ZNF346Q9UL40 294 aaKnown RBP6.41□□□□□ -1.38
CTNND1-216ENST00000527467 SCRG1O75711 98 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 ID1P41134 155 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 ACVR1Q04771 509 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 SRSF6Q13247 344 aaKnown RBP6.41□□□□□ -1.38
CTNND1-216ENST00000527467 SLC25A35Q3KQZ1 300 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 NKAIN4Q8IVV8 208 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 LINC01465Q8N7H1 131 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 PRSS33Q8NF86 280 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 SPSB1Q96BD6 273 aa6.41□□□□□ -1.38
CTNND1-216ENST00000527467 OPN4Q9UHM6 478 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms