RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 ADH4P08319 380 aa15.81■□□□□ 0.12
SMPD1-203ENST00000527275 OR5H8P0DN80 308 aa15.81■□□□□ 0.12
SMPD1-203ENST00000527275 VAMP1P23763 118 aa15.81■□□□□ 0.12
SMPD1-203ENST00000527275 MZT1Q08AG7 82 aa15.81■□□□□ 0.12
SMPD1-203ENST00000527275 BAMBIQ13145 260 aa15.81■□□□□ 0.12
SMPD1-203ENST00000527275 TMEM128Q5BJH2 165 aa15.81■□□□□ 0.12
SMPD1-203ENST00000527275 DCAF12L2Q5VW00 463 aa15.81■□□□□ 0.12
SMPD1-203ENST00000527275 LINC00596Q86U02 117 aa15.81■□□□□ 0.12
SMPD1-203ENST00000527275 MITD1Q8WV92 249 aa15.81■□□□□ 0.12
SMPD1-203ENST00000527275 ITLN1Q8WWA0 313 aa15.81■□□□□ 0.12
SMPD1-203ENST00000527275 RTBDNQ9BSG5 229 aaPredicted RBP15.81■□□□□ 0.12
SMPD1-203ENST00000527275 GON7Q9BXV9 100 aa15.81■□□□□ 0.12
SMPD1-203ENST00000527275 ZNF286AQ9HBT8 521 aa15.81■□□□□ 0.12
SMPD1-203ENST00000527275 RCC2Q9P258 522 aaKnown RBP15.81■□□□□ 0.12
SMPD1-203ENST00000527275 OPN4Q9UHM6 478 aa15.81■□□□□ 0.12
SMPD1-203ENST00000527275 TACC2O95359 2948 aa15.81■□□□□ 0.12
SMPD1-203ENST00000527275 PTBP3O95758 552 aaKnown RBP15.8■□□□□ 0.12
SMPD1-203ENST00000527275 TNFSF4P23510 183 aa15.8■□□□□ 0.12
SMPD1-203ENST00000527275 PHB2Q99623 299 aa15.8■□□□□ 0.12
SMPD1-203ENST00000527275 TLNRD1Q9H1K6 362 aa15.8■□□□□ 0.12
SMPD1-203ENST00000527275 RHOFQ9HBH0 211 aa15.8■□□□□ 0.12
SMPD1-203ENST00000527275 CBLN4Q9NTU7 201 aa15.8■□□□□ 0.12
SMPD1-203ENST00000527275 LAMP3Q9UQV4 416 aa15.8■□□□□ 0.12
SMPD1-203ENST00000527275 SPG11Q96JI7 2443 aa15.8■□□□□ 0.12
SMPD1-203ENST00000527275 C3orf80F5H4A9 247 aa15.8■□□□□ 0.12
SMPD1-203ENST00000527275 PI3P19957 117 aa15.8■□□□□ 0.12
SMPD1-203ENST00000527275 DHODHQ02127 395 aa15.8■□□□□ 0.12
SMPD1-203ENST00000527275 SURF2Q15527 256 aaPredicted RBP15.8■□□□□ 0.12
SMPD1-203ENST00000527275 CASTOR1Q8WTX7 329 aa15.8■□□□□ 0.12
SMPD1-203ENST00000527275 DIRC2Q96SL1 478 aa15.8■□□□□ 0.12
SMPD1-203ENST00000527275 CHMP1AQ9HD42 196 aaPredicted RBP15.8■□□□□ 0.12
SMPD1-203ENST00000527275 POLDIP2Q9Y2S7 368 aa15.8■□□□□ 0.12
SMPD1-203ENST00000527275 DSCAMO60469 2012 aa15.8■□□□□ 0.12
SMPD1-203ENST00000527275 USF3Q68DE3 2245 aa15.79■□□□□ 0.12
SMPD1-203ENST00000527275 CELSR2Q9HCU4 2923 aa15.79■□□□□ 0.12
SMPD1-203ENST00000527275 MCRIP1C9JLW8 97 aa15.79■□□□□ 0.12
SMPD1-203ENST00000527275 GLRA1P23415 457 aa15.79■□□□□ 0.12
SMPD1-203ENST00000527275 IL13RA2Q14627 380 aa15.79■□□□□ 0.12
SMPD1-203ENST00000527275 LY6G6FQ5SQ64 297 aa15.79■□□□□ 0.12
SMPD1-203ENST00000527275 ZNF660Q6AZW8 331 aaPredicted RBP15.79■□□□□ 0.12
SMPD1-203ENST00000527275 DHRS11Q6UWP2 260 aa15.79■□□□□ 0.12
SMPD1-203ENST00000527275 Q6ZPA2 131 aa15.79■□□□□ 0.12
SMPD1-203ENST00000527275 SLC7A5P1Q8MH63 180 aa15.79■□□□□ 0.12
SMPD1-203ENST00000527275 ASB13Q8WXK3 278 aa15.79■□□□□ 0.12
SMPD1-203ENST00000527275 TMEM230Q96A57 120 aa15.79■□□□□ 0.12
SMPD1-203ENST00000527275 VRK1Q99986 396 aaPredicted RBP15.79■□□□□ 0.12
SMPD1-203ENST00000527275 SPACA1Q9HBV2 294 aa15.79■□□□□ 0.12
SMPD1-203ENST00000527275 DUS4LO95620 317 aaKnown RBP15.79■□□□□ 0.12
SMPD1-203ENST00000527275 CD55P08174 381 aa15.79■□□□□ 0.12
SMPD1-203ENST00000527275 ECI1P42126 302 aa15.79■□□□□ 0.12
SMPD1-203ENST00000527275 HOXA4Q00056 320 aaPredicted RBP15.79■□□□□ 0.12
SMPD1-203ENST00000527275 LGALSLQ3ZCW2 172 aaPredicted RBP15.79■□□□□ 0.12
SMPD1-203ENST00000527275 FAM209AQ5JX71 171 aa15.79■□□□□ 0.12
SMPD1-203ENST00000527275 C11orf71Q6IPW1 123 aa15.79■□□□□ 0.12
SMPD1-203ENST00000527275 LIN54Q6MZP7 749 aa15.79■□□□□ 0.12
SMPD1-203ENST00000527275 WDR82Q6UXN9 313 aa15.79■□□□□ 0.12
SMPD1-203ENST00000527275 DTX2Q86UW9 622 aa15.79■□□□□ 0.12
SMPD1-203ENST00000527275 PSMG3-AS1Q96PY0 264 aa15.79■□□□□ 0.12
SMPD1-203ENST00000527275 GCM1Q9NP62 436 aa15.79■□□□□ 0.12
SMPD1-203ENST00000527275 RAI1Q7Z5J4 1906 aaPredicted RBP15.78■□□□□ 0.12
SMPD1-203ENST00000527275 hCG_1807616A0A1W2PRN6 198 aa15.78■□□□□ 0.12
SMPD1-203ENST00000527275 PGAM2P15259 253 aa15.78■□□□□ 0.12
SMPD1-203ENST00000527275 GATA4P43694 442 aa15.78■□□□□ 0.12
SMPD1-203ENST00000527275 MOGAT3Q86VF5 341 aa15.78■□□□□ 0.12
SMPD1-203ENST00000527275 Q8IYB0 196 aa15.78■□□□□ 0.12
SMPD1-203ENST00000527275 OR5M8Q8NGP6 311 aa15.78■□□□□ 0.12
SMPD1-203ENST00000527275 WDR13Q9H1Z4 485 aa15.78■□□□□ 0.12
SMPD1-203ENST00000527275 PLEKHF2Q9H8W4 249 aa15.78■□□□□ 0.12
SMPD1-203ENST00000527275 DECR2Q9NUI1 292 aa15.78■□□□□ 0.12
SMPD1-203ENST00000527275 C1orf123Q9NWV4 160 aa15.78■□□□□ 0.12
SMPD1-203ENST00000527275 HSPB6O14558 160 aa15.77■□□□□ 0.12
SMPD1-203ENST00000527275 RGS11O94810 467 aa15.77■□□□□ 0.12
SMPD1-203ENST00000527275 GMFBP60983 142 aa15.77■□□□□ 0.12
SMPD1-203ENST00000527275 LPCAT3Q6P1A2 487 aa15.77■□□□□ 0.12
SMPD1-203ENST00000527275 SUMF2Q8NBJ7 301 aa15.77■□□□□ 0.12
SMPD1-203ENST00000527275 NEK7Q8TDX7 302 aa15.77■□□□□ 0.12
SMPD1-203ENST00000527275 TMPRSS13Q9BYE2 586 aa15.77■□□□□ 0.12
SMPD1-203ENST00000527275 LIME1Q9H400 295 aa15.77■□□□□ 0.12
SMPD1-203ENST00000527275 SAP30LQ9HAJ7 183 aa15.77■□□□□ 0.12
SMPD1-203ENST00000527275 TREM2Q9NZC2 230 aa15.77■□□□□ 0.12
SMPD1-203ENST00000527275 SFT2D2O95562 160 aa15.77■□□□□ 0.11
SMPD1-203ENST00000527275 HLA-GP17693 338 aa15.77■□□□□ 0.11
SMPD1-203ENST00000527275 ERVK11-1P61568 191 aa15.77■□□□□ 0.11
SMPD1-203ENST00000527275 TLE4Q04727 773 aa15.77■□□□□ 0.11
SMPD1-203ENST00000527275 KCTD9Q7L273 389 aa15.77■□□□□ 0.11
SMPD1-203ENST00000527275 C14orf166Q9Y224 244 aaKnown RBP15.77■□□□□ 0.11
SMPD1-203ENST00000527275 DEGS1O15121 323 aa15.76■□□□□ 0.11
SMPD1-203ENST00000527275 NAPSAO96009 420 aa15.76■□□□□ 0.11
SMPD1-203ENST00000527275 PGA5P0DJD9 388 aa15.76■□□□□ 0.11
SMPD1-203ENST00000527275 TNFRSF1AP19438 455 aa15.76■□□□□ 0.11
SMPD1-203ENST00000527275 SRSF7Q16629 238 aaKnown RBP eCLIP15.76■□□□□ 0.11
SMPD1-203ENST00000527275 TGIF2LYQ8IUE0 185 aa15.76■□□□□ 0.11
SMPD1-203ENST00000527275 ZNF295-AS1Q8N0V1 137 aa15.76■□□□□ 0.11
SMPD1-203ENST00000527275 NRIP2Q9BQI9 281 aa15.76■□□□□ 0.11
SMPD1-203ENST00000527275 EGLN1Q9GZT9 426 aa15.76■□□□□ 0.11
SMPD1-203ENST00000527275 SLC23A1Q9UHI7 598 aa15.76■□□□□ 0.11
SMPD1-203ENST00000527275 PPP1R3CQ9UQK1 317 aa15.76■□□□□ 0.11
SMPD1-203ENST00000527275 DYSFO75923 2080 aa15.76■□□□□ 0.11
SMPD1-203ENST00000527275 TRAV24A0A0B4J272 114 aa15.76■□□□□ 0.11
SMPD1-203ENST00000527275 TSC22D2O75157 780 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms