RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 IFNA8P32881 189 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 OPRM1P35372 400 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 OR1E2P47887 323 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 OR2B6P58173 313 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 SELENOWP63302 87 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 SLC35A1P78382 337 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 H3F3AP84243 136 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 IL24Q13007 206 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 ARL6IP1Q15041 203 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 OR7A5Q15622 319 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 SLC25A35Q3KQZ1 300 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 FBXL19-AS1Q494R0 122 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 CCDC58Q4VC31 144 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 SAMD4BQ5PRF9 694 aaKnown RBP2.67□□□□□ -1.98
CD44-219ENST00000525685 C1orf140Q5VVS0 124 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 GLYATQ6IB77 296 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 OR2A2Q6IF42 318 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 ULK3Q6PHR2 472 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 VTCN1Q7Z7D3 282 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 LUZP2Q86TE4 346 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 DHRSXQ8N5I4 330 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 KIR3DL3Q8N743 410 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 FAM86B1Q8N7N1 296 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 CNEP1R1Q8N9A8 125 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 ACBD4Q8NC06 268 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 OR10A7Q8NGE5 316 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 OR6K3Q8NGY3 331 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 CA5BP1Q8WTZ4 195 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 DNAJA4Q8WW22 397 aaPredicted RBP2.67□□□□□ -1.98
CD44-219ENST00000525685 RASSF5Q8WWW0 418 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 OSTF1Q92882 214 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 SLC38A4Q969I6 547 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 DDIT4LQ96D03 193 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 STARD4Q96DR4 205 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 SLC41A3Q96GZ6 507 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 TPD52L3Q96J77 140 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 PRRC1Q96M27 445 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 KCNS3Q9BQ31 491 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 PRSS27Q9BQR3 290 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 ZNF426Q9BUY5 554 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 TAPBPLQ9BX59 468 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 POTEKPQ9BYX7 375 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 YIPF3Q9GZM5 350 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 MAGT1Q9H0U3 335 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 OR51J1Q9H342 316 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 TMEM27Q9HBJ8 222 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 PLGRKTQ9HBL7 147 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 KCNJ16Q9NPI9 418 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 ZNF629Q9UEG4 869 aaPredicted RBP2.67□□□□□ -1.98
CD44-219ENST00000525685 HDGFL3Q9Y3E1 203 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 V9GYQ6 96 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 HEATR5AQ86XA9 2040 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 BOD1L1Q8NFC6 3051 aa2.67□□□□□ -1.98
CD44-219ENST00000525685 ZNF407Q9C0G0 2248 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 ZGRF1Q86YA3 2104 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 TLN1Q9Y490 2541 aaKnown RBP2.66□□□□□ -1.98
CD44-219ENST00000525685 TRAV36DV7A0A075B6V5 113 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 A0A1B0GWB2 263 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 TRAPPC13A5PLN9 417 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 ZNF705EA8MWA4 302 aaPredicted RBP2.66□□□□□ -1.98
CD44-219ENST00000525685 LRRN3E7EW58 273 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 hCG_2039718K7EN88 272 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 K7N7A8 449 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 KPNA4O00629 521 aaPredicted RBP2.66□□□□□ -1.98
CD44-219ENST00000525685 FFAR1O14842 300 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 EIF1BO60739 113 aaKnown RBP2.66□□□□□ -1.98
CD44-219ENST00000525685 DIRAS1O95057 198 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 ZNF682O95780 498 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 IFNW1P05000 195 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 H2BFMP0C1H6 154 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 PNMTP11086 282 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 COX6B1P14854 86 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 RPA2P15927 270 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 FKBP2P26885 142 aaKnown RBP2.66□□□□□ -1.98
CD44-219ENST00000525685 GTF2E2P29084 291 aaKnown RBP2.66□□□□□ -1.98
CD44-219ENST00000525685 CDKN1BP46527 198 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 RPS5P46782 204 aaKnown RBP2.66□□□□□ -1.98
CD44-219ENST00000525685 YAP1P46937 504 aaKnown RBP2.66□□□□□ -1.98
CD44-219ENST00000525685 UGT2B15P54855 530 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 CTBP2P56545 445 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 TAS2R41P59536 307 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 RAB4BP61018 213 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 PSG7Q13046 419 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 PDK3Q15120 406 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 TIGITQ495A1 244 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 DNAL1Q4LDG9 190 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 LCN8Q6JVE9 175 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 TTC33Q6PID6 262 aaPredicted RBP2.66□□□□□ -1.98
CD44-219ENST00000525685 C5orf46Q6UWT4 87 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 FAM220AQ7Z4H9 259 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 KRTAP11-1Q8IUC1 163 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 SLC38A6Q8IZM9 456 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 OFCC1Q8IZS5 231 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 ZIC4Q8N9L1 334 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 PFN4Q8NHR9 129 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 MFSD8Q8NHS3 518 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 PIGXQ8TBF5 258 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 GEMIN6Q8WXD5 167 aaKnown RBP2.66□□□□□ -1.98
CD44-219ENST00000525685 TNFRSF14Q92956 283 aa2.66□□□□□ -1.98
CD44-219ENST00000525685 RNASE6Q93091 150 aaKnown RBP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms